Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 Gm25239-201ENSMUST00000174915 86 ntBASIC46.84■■■■■ 5.09
Zcchc17Q9ESX4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC43.49■■■■■ 4.55
Zcchc17Q9ESX4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.91■■■■■ 4.46
Zcchc17Q9ESX4 Gm24109-201ENSMUST00000175489 103 ntBASIC40.78■■■■■ 4.12
Zcchc17Q9ESX4 Gm15042-201ENSMUST00000120212 883 ntBASIC40.54■■■■■ 4.08
Zcchc17Q9ESX4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.63■■■■□ 3.93
Zcchc17Q9ESX4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
Zcchc17Q9ESX4 Gm15045-201ENSMUST00000117359 883 ntBASIC39.55■■■■□ 3.92
Zcchc17Q9ESX4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
Zcchc17Q9ESX4 Gm23366-201ENSMUST00000175022 89 ntBASIC39.13■■■■□ 3.85
Zcchc17Q9ESX4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Zcchc17Q9ESX4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC38.15■■■■□ 3.7
Zcchc17Q9ESX4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
Zcchc17Q9ESX4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC37.85■■■■□ 3.65
Zcchc17Q9ESX4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
Zcchc17Q9ESX4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.77■■■■□ 3.64
Zcchc17Q9ESX4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.58■■■■□ 3.61
Zcchc17Q9ESX4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
Zcchc17Q9ESX4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
Zcchc17Q9ESX4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Zcchc17Q9ESX4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Zcchc17Q9ESX4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC37.24■■■■□ 3.55
Zcchc17Q9ESX4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Zcchc17Q9ESX4 Gm25238-201ENSMUST00000174914 89 ntBASIC37.1■■■■□ 3.53
Zcchc17Q9ESX4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.75■■■■□ 3.47
Zcchc17Q9ESX4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.52■■■■□ 3.44
Zcchc17Q9ESX4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Zcchc17Q9ESX4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.42■■■■□ 3.42
Zcchc17Q9ESX4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Zcchc17Q9ESX4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.36■■■■□ 3.41
Zcchc17Q9ESX4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC36.24■■■■□ 3.39
Zcchc17Q9ESX4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC36.22■■■■□ 3.39
Zcchc17Q9ESX4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Zcchc17Q9ESX4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36.05■■■■□ 3.36
Zcchc17Q9ESX4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.99■■■■□ 3.35
Zcchc17Q9ESX4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.97■■■■□ 3.35
Zcchc17Q9ESX4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.94■■■■□ 3.34
Zcchc17Q9ESX4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.84■■■■□ 3.33
Zcchc17Q9ESX4 Gm25262-201ENSMUST00000174934 133 ntBASIC35.82■■■■□ 3.32
Zcchc17Q9ESX4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
Zcchc17Q9ESX4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.59■■■■□ 3.29
Zcchc17Q9ESX4 Gm27325-201ENSMUST00000175467 74 ntBASIC35.47■■■■□ 3.27
Zcchc17Q9ESX4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.44■■■■□ 3.26
Zcchc17Q9ESX4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Zcchc17Q9ESX4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Zcchc17Q9ESX4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.17■■■■□ 3.22
Zcchc17Q9ESX4 Rab21-202ENSMUST00000218831 843 ntBASIC35.14■■■■□ 3.22
Zcchc17Q9ESX4 Gm26115-201ENSMUST00000175605 87 ntBASIC35.12■■■■□ 3.21
Zcchc17Q9ESX4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.08■■■■□ 3.21
Zcchc17Q9ESX4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.05■■■■□ 3.2
Zcchc17Q9ESX4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35.04■■■■□ 3.2
Zcchc17Q9ESX4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.01■■■■□ 3.2
Zcchc17Q9ESX4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Zcchc17Q9ESX4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.95■■■■□ 3.18
Zcchc17Q9ESX4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
Zcchc17Q9ESX4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC34.91■■■■□ 3.18
Zcchc17Q9ESX4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
Zcchc17Q9ESX4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Zcchc17Q9ESX4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Zcchc17Q9ESX4 Gm8109-201ENSMUST00000194076 746 ntBASIC34.77■■■■□ 3.16
Zcchc17Q9ESX4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Zcchc17Q9ESX4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
Zcchc17Q9ESX4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.62■■■■□ 3.13
Zcchc17Q9ESX4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34.6■■■■□ 3.13
Zcchc17Q9ESX4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.54■■■■□ 3.12
Zcchc17Q9ESX4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC34.44■■■■□ 3.1
Zcchc17Q9ESX4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.36■■■■□ 3.09
Zcchc17Q9ESX4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
Zcchc17Q9ESX4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
Zcchc17Q9ESX4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Zcchc17Q9ESX4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Zcchc17Q9ESX4 Psd-208ENSMUST00000224556 2034 ntBASIC34.27■■■■□ 3.08
Zcchc17Q9ESX4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34.25■■■■□ 3.07
Zcchc17Q9ESX4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Zcchc17Q9ESX4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Zcchc17Q9ESX4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.07■■■■□ 3.04
Zcchc17Q9ESX4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Zcchc17Q9ESX4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Zcchc17Q9ESX4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.03■■■■□ 3.04
Zcchc17Q9ESX4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.97■■■■□ 3.03
Zcchc17Q9ESX4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.97■■■■□ 3.03
Zcchc17Q9ESX4 Gm17082-201ENSMUST00000166043 1091 ntBASIC33.97■■■■□ 3.03
Zcchc17Q9ESX4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC33.94■■■■□ 3.02
Zcchc17Q9ESX4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Zcchc17Q9ESX4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.77■■■■□ 3
Zcchc17Q9ESX4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Zcchc17Q9ESX4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.72■■■□□ 2.99
Zcchc17Q9ESX4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Zcchc17Q9ESX4 Gm24804-201ENSMUST00000174982 85 ntBASIC33.69■■■□□ 2.98
Zcchc17Q9ESX4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
Zcchc17Q9ESX4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.63■■■□□ 2.97
Zcchc17Q9ESX4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.62■■■□□ 2.97
Zcchc17Q9ESX4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.61■■■□□ 2.97
Zcchc17Q9ESX4 Gm27322-201ENSMUST00000184007 104 ntBASIC33.6■■■□□ 2.97
Zcchc17Q9ESX4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.59■■■□□ 2.97
Zcchc17Q9ESX4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Zcchc17Q9ESX4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.51■■■□□ 2.96
Zcchc17Q9ESX4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33.46■■■□□ 2.95
Zcchc17Q9ESX4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Zcchc17Q9ESX4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.42■■■□□ 2.94
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms