Protein–RNA interactions for Protein: Q80U62

Rubcn, Run domain Beclin-1-interacting and cysteine-rich domain-containing protein, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RubcnQ80U62 Gm25239-201ENSMUST00000174915 86 ntBASIC47.05■■■■■ 5.12
RubcnQ80U62 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC43.84■■■■■ 4.61
RubcnQ80U62 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC43.1■■■■■ 4.49
RubcnQ80U62 Gm24109-201ENSMUST00000175489 103 ntBASIC41.13■■■■■ 4.17
RubcnQ80U62 Gm15042-201ENSMUST00000120212 883 ntBASIC40.44■■■■■ 4.06
RubcnQ80U62 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.77■■■■□ 3.96
RubcnQ80U62 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
RubcnQ80U62 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
RubcnQ80U62 Gm15045-201ENSMUST00000117359 883 ntBASIC39.45■■■■□ 3.91
RubcnQ80U62 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
RubcnQ80U62 Gm23366-201ENSMUST00000175022 89 ntBASIC39.17■■■■□ 3.86
RubcnQ80U62 AC153911.1-202ENSMUST00000218534 1034 ntBASIC38.61■■■■□ 3.77
RubcnQ80U62 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC38.25■■■■□ 3.71
RubcnQ80U62 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
RubcnQ80U62 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC38.19■■■■□ 3.7
RubcnQ80U62 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
RubcnQ80U62 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
RubcnQ80U62 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
RubcnQ80U62 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.46■■■■□ 3.59
RubcnQ80U62 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC37.38■■■■□ 3.57
RubcnQ80U62 Gm25238-201ENSMUST00000174914 89 ntBASIC37.37■■■■□ 3.57
RubcnQ80U62 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
RubcnQ80U62 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
RubcnQ80U62 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.56■■■■□ 3.44
RubcnQ80U62 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
RubcnQ80U62 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
RubcnQ80U62 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.46■■■■□ 3.43
RubcnQ80U62 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC36.31■■■■□ 3.4
RubcnQ80U62 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
RubcnQ80U62 Gm25262-201ENSMUST00000174934 133 ntBASIC36.11■■■■□ 3.37
RubcnQ80U62 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36.02■■■■□ 3.36
RubcnQ80U62 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
RubcnQ80U62 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.97■■■■□ 3.35
RubcnQ80U62 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.86■■■■□ 3.33
RubcnQ80U62 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.72■■■■□ 3.31
RubcnQ80U62 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.64■■■■□ 3.3
RubcnQ80U62 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
RubcnQ80U62 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.6■■■■□ 3.29
RubcnQ80U62 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.6■■■■□ 3.29
RubcnQ80U62 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.58■■■■□ 3.29
RubcnQ80U62 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.54■■■■□ 3.28
RubcnQ80U62 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC35.53■■■■□ 3.28
RubcnQ80U62 Gm26115-201ENSMUST00000175605 87 ntBASIC35.49■■■■□ 3.27
RubcnQ80U62 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
RubcnQ80U62 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
RubcnQ80U62 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
RubcnQ80U62 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.33■■■■□ 3.25
RubcnQ80U62 Gm27325-201ENSMUST00000175467 74 ntBASIC35.31■■■■□ 3.24
RubcnQ80U62 Gm8109-201ENSMUST00000194076 746 ntBASIC35.24■■■■□ 3.23
RubcnQ80U62 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
RubcnQ80U62 Rab21-202ENSMUST00000218831 843 ntBASIC35.11■■■■□ 3.21
RubcnQ80U62 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.1■■■■□ 3.21
RubcnQ80U62 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
RubcnQ80U62 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
RubcnQ80U62 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
RubcnQ80U62 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
RubcnQ80U62 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.72■■■■□ 3.15
RubcnQ80U62 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
RubcnQ80U62 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.65■■■■□ 3.14
RubcnQ80U62 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
RubcnQ80U62 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC34.52■■■■□ 3.12
RubcnQ80U62 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.47■■■■□ 3.11
RubcnQ80U62 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC34.42■■■■□ 3.1
RubcnQ80U62 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
RubcnQ80U62 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
RubcnQ80U62 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.36■■■■□ 3.09
RubcnQ80U62 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34.34■■■■□ 3.09
RubcnQ80U62 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
RubcnQ80U62 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
RubcnQ80U62 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.07
RubcnQ80U62 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
RubcnQ80U62 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.09■■■■□ 3.05
RubcnQ80U62 Gm17082-201ENSMUST00000166043 1091 ntBASIC34.05■■■■□ 3.04
RubcnQ80U62 Gm24804-201ENSMUST00000174982 85 ntBASIC34.02■■■■□ 3.04
RubcnQ80U62 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.02■■■■□ 3.04
RubcnQ80U62 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34.02■■■■□ 3.04
RubcnQ80U62 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
RubcnQ80U62 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
RubcnQ80U62 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.85■■■■□ 3.01
RubcnQ80U62 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33.7■■■□□ 2.99
RubcnQ80U62 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.67■■■□□ 2.98
RubcnQ80U62 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC33.64■■■□□ 2.98
RubcnQ80U62 Gm27322-201ENSMUST00000184007 104 ntBASIC33.64■■■□□ 2.98
RubcnQ80U62 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.62■■■□□ 2.97
RubcnQ80U62 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
RubcnQ80U62 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.58■■■□□ 2.97
RubcnQ80U62 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC33.57■■■□□ 2.96
RubcnQ80U62 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.56■■■□□ 2.96
RubcnQ80U62 Psd-208ENSMUST00000224556 2034 ntBASIC33.54■■■□□ 2.96
RubcnQ80U62 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33.52■■■□□ 2.96
RubcnQ80U62 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.5■■■□□ 2.95
RubcnQ80U62 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.48■■■□□ 2.95
RubcnQ80U62 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33.48■■■□□ 2.95
RubcnQ80U62 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33.47■■■□□ 2.95
RubcnQ80U62 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
RubcnQ80U62 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
RubcnQ80U62 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC33.42■■■□□ 2.94
RubcnQ80U62 Zfp131-205ENSMUST00000223812 663 ntBASIC33.37■■■□□ 2.93
RubcnQ80U62 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
RubcnQ80U62 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms