RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C CTS1P29029 562 aa3.74□□□□□ -1.81
RPC40YPR110C PTP2P29461 750 aa3.74□□□□□ -1.81
RPC40YPR110C EFT1P32324 842 aaKnown RBP3.74□□□□□ -1.81
RPC40YPR110C HXT4P32467 576 aa3.74□□□□□ -1.81
RPC40YPR110C YKL133CP36066 463 aa3.74□□□□□ -1.81
RPC40YPR110C NUP60P39705 539 aa3.74□□□□□ -1.81
RPC40YPR110C YNL195CP40168 261 aa3.74□□□□□ -1.81
RPC40YPR110C PXA1P41909 870 aa3.74□□□□□ -1.81
RPC40YPR110C TAF4P50105 388 aa3.74□□□□□ -1.81
RPC40YPR110C PPN1Q04119 674 aa3.74□□□□□ -1.81
RPC40YPR110C VBA4Q04602 768 aaKnown RBP3.74□□□□□ -1.81
RPC40YPR110C THI22Q06490 572 aa3.74□□□□□ -1.81
RPC40YPR110C SGO1Q08490 590 aa3.74□□□□□ -1.81
RPC40YPR110C DIA2Q08496 732 aaPredicted RBP3.74□□□□□ -1.81
RPC40YPR110C NTO1Q12311 748 aa3.74□□□□□ -1.81
RPC40YPR110C POM34Q12445 299 aa3.74□□□□□ -1.81
RPC40YPR110C TOP1P04786 769 aa3.73□□□□□ -1.81
RPC40YPR110C KIN82P25341 720 aa3.73□□□□□ -1.81
RPC40YPR110C HCM1P25364 564 aa3.73□□□□□ -1.81
RPC40YPR110C MTC7P32633 139 aa3.73□□□□□ -1.81
RPC40YPR110C SHM2P37291 469 aaKnown RBP3.73□□□□□ -1.81
RPC40YPR110C CCT3P39077 534 aaKnown RBP3.73□□□□□ -1.81
RPC40YPR110C SSP120P39931 234 aaKnown RBP3.73□□□□□ -1.81
RPC40YPR110C PHO23P50947 330 aa3.73□□□□□ -1.81
RPC40YPR110C COX18P53239 316 aa3.73□□□□□ -1.81
RPC40YPR110C MTD1Q02046 320 aaKnown RBP3.73□□□□□ -1.81
RPC40YPR110C ADY4Q05955 493 aa3.73□□□□□ -1.81
RPC40YPR110C CWC2Q12046 339 aaPredicted RBP3.73□□□□□ -1.81
RPC40YPR110C NYV1Q12255 253 aa3.73□□□□□ -1.81
RPC40YPR110C TRM13Q12383 476 aa3.73□□□□□ -1.81
RPC40YPR110C SIR3P06701 978 aa3.72□□□□□ -1.81
RPC40YPR110C YEL076C-AP0CX16 216 aa3.72□□□□□ -1.81
RPC40YPR110C YLR464WP0CX17 216 aa3.72□□□□□ -1.81
RPC40YPR110C PWP2P25635 923 aaKnown RBP3.72□□□□□ -1.81
RPC40YPR110C HRR25P29295 494 aaKnown RBP3.72□□□□□ -1.81
RPC40YPR110C PRE4P30657 266 aa3.72□□□□□ -1.81
RPC40YPR110C VPS24P36095 224 aaKnown RBP3.72□□□□□ -1.81
RPC40YPR110C BCD1P38772 366 aa3.72□□□□□ -1.81
RPC40YPR110C FMO1P38866 432 aa3.72□□□□□ -1.81
RPC40YPR110C STL1P39932 569 aa3.72□□□□□ -1.81
RPC40YPR110C YEL076CP39971 216 aa3.72□□□□□ -1.81
RPC40YPR110C YIL092WP40497 633 aa3.72□□□□□ -1.81
RPC40YPR110C TAF1P46677 1066 aa3.72□□□□□ -1.81
RPC40YPR110C UBC11P52492 156 aa3.72□□□□□ -1.81
RPC40YPR110C PEF1P53238 335 aa3.72□□□□□ -1.81
RPC40YPR110C SPO1P53541 631 aa3.72□□□□□ -1.81
RPC40YPR110C PAP2P53632 584 aaKnown RBP3.72□□□□□ -1.81
RPC40YPR110C UBX4P54730 416 aa3.72□□□□□ -1.81
RPC40YPR110C CEG1Q01159 459 aaPredicted RBP3.72□□□□□ -1.81
RPC40YPR110C HLR1Q04429 423 aa3.72□□□□□ -1.81
RPC40YPR110C ESC8Q08119 714 aa3.72□□□□□ -1.81
RPC40YPR110C AIM39Q08223 395 aa3.72□□□□□ -1.81
RPC40YPR110C FRE5Q08908 694 aa3.72□□□□□ -1.81
RPC40YPR110C CLF1Q12309 687 aaPredicted RBP3.72□□□□□ -1.81
RPC40YPR110C ECM3Q99252 613 aa3.72□□□□□ -1.81
RPC40YPR110C ALG7P07286 448 aa3.71□□□□□ -1.82
RPC40YPR110C PRP28P23394 588 aa3.71□□□□□ -1.82
RPC40YPR110C PMI40P29952 429 aaKnown RBP3.71□□□□□ -1.82
RPC40YPR110C CDS1P38221 457 aa3.71□□□□□ -1.82
RPC40YPR110C RIM4P38741 713 aa3.71□□□□□ -1.82
RPC40YPR110C PMC1P38929 1173 aaPredicted RBP3.71□□□□□ -1.82
RPC40YPR110C EAF5P39995 279 aa3.71□□□□□ -1.82
RPC40YPR110C PRM2P40534 656 aa3.71□□□□□ -1.82
RPC40YPR110C YJL163CP46996 555 aa3.71□□□□□ -1.82
RPC40YPR110C RNT1Q02555 471 aa3.71□□□□□ -1.82
RPC40YPR110C VMS1Q04311 632 aaKnown RBP3.71□□□□□ -1.82
RPC40YPR110C URN1Q06525 465 aaKnown RBP3.71□□□□□ -1.82
RPC40YPR110C OMS1Q06668 471 aa3.71□□□□□ -1.82
RPC40YPR110C VPS5Q92331 675 aa3.71□□□□□ -1.82
RPC40YPR110C PPR1P07272 904 aaPredicted RBP3.7□□□□□ -1.82
RPC40YPR110C PGI1P12709 554 aaKnown RBP3.7□□□□□ -1.82
RPC40YPR110C BCS1P32839 456 aa3.7□□□□□ -1.82
RPC40YPR110C SDS22P36047 338 aa3.7□□□□□ -1.82
RPC40YPR110C YHR033WP38690 423 aa3.7□□□□□ -1.82
RPC40YPR110C IES5P40060 125 aa3.7□□□□□ -1.82
RPC40YPR110C PIG2P40187 538 aa3.7□□□□□ -1.82
RPC40YPR110C HIS6P40545 261 aa3.7□□□□□ -1.82
RPC40YPR110C MAD2P40958 196 aa3.7□□□□□ -1.82
RPC40YPR110C ASK10P48361 1146 aa3.7□□□□□ -1.82
RPC40YPR110C FDC1Q03034 503 aa3.7□□□□□ -1.82
RPC40YPR110C RGC1Q06108 1083 aaKnown RBP3.7□□□□□ -1.82
RPC40YPR110C BRE1Q07457 700 aaKnown RBP3.7□□□□□ -1.82
RPC40YPR110C YLR040CQ07988 224 aa3.7□□□□□ -1.82
RPC40YPR110C IRC13Q08630 104 aa3.7□□□□□ -1.82
RPC40YPR110C DIN7Q12086 430 aa3.7□□□□□ -1.82
RPC40YPR110C RTK1Q12100 620 aaPredicted RBP3.7□□□□□ -1.82
RPC40YPR110C PSF3Q12146 194 aa3.7□□□□□ -1.82
RPC40YPR110C MSS18P08593 268 aa3.69□□□□□ -1.82
RPC40YPR110C HMG2P12684 1045 aa3.69□□□□□ -1.82
RPC40YPR110C YEF3P16521 1044 aaKnown RBP3.69□□□□□ -1.82
RPC40YPR110C YCR015CP25616 317 aa3.69□□□□□ -1.82
RPC40YPR110C CWH43P25618 953 aa3.69□□□□□ -1.82
RPC40YPR110C FEN2P25621 512 aaKnown RBP3.69□□□□□ -1.82
RPC40YPR110C TGL1P34163 548 aa3.69□□□□□ -1.82
RPC40YPR110C YKL222CP35995 705 aa3.69□□□□□ -1.82
RPC40YPR110C RMA1P36001 430 aaKnown RBP3.69□□□□□ -1.82
RPC40YPR110C YHL041WP38730 149 aa3.69□□□□□ -1.82
RPC40YPR110C REV7P38927 245 aa3.69□□□□□ -1.82
RPC40YPR110C FMP52P40008 231 aa3.69□□□□□ -1.82
RPC40YPR110C QRI7P43122 407 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 98.4 ms