RNA–Protein interactions for RNA: YPL149W

ATG5, Transcript of Conserved protein involved in autophagy and the Cvt pathway, yeast

Gene ATG5, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG5	YPL149W	BIT61	P47041	543 aa		4.72	□□□□□ -1.65
ATG5	YPL149W	TAF4	P50105	388 aa		4.72	□□□□□ -1.65
ATG5	YPL149W	DIA2	Q08496	732 aa	Predicted RBP	4.72	□□□□□ -1.65
ATG5	YPL149W	SEC15	P22224	910 aa		4.71	□□□□□ -1.66
ATG5	YPL149W	KCC4	P25389	1037 aa		4.71	□□□□□ -1.66
ATG5	YPL149W	HIS7	P33734	552 aa	Known RBP	4.71	□□□□□ -1.66
ATG5	YPL149W	CCT3	P39077	534 aa	Known RBP	4.71	□□□□□ -1.66
ATG5	YPL149W	NUP60	P39705	539 aa		4.71	□□□□□ -1.66
ATG5	YPL149W	ENP2	P48234	707 aa	Known RBP	4.71	□□□□□ -1.66
ATG5	YPL149W	PPN1	Q04119	674 aa		4.71	□□□□□ -1.66
ATG5	YPL149W	RGC1	Q06108	1083 aa	Known RBP	4.71	□□□□□ -1.66
ATG5	YPL149W	IRC13	Q08630	104 aa		4.71	□□□□□ -1.66
ATG5	YPL149W	FRE5	Q08908	694 aa		4.71	□□□□□ -1.66
ATG5	YPL149W	NTO1	Q12311	748 aa		4.71	□□□□□ -1.66
ATG5	YPL149W	POM34	Q12445	299 aa		4.71	□□□□□ -1.66
ATG5	YPL149W	YEL076C-A	P0CX16	216 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	YLR464W	P0CX17	216 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
ATG5	YPL149W	PEX1	P24004	1043 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	KIN82	P25341	720 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	MF(ALPHA)2	P32435	120 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	SRP68	P38687	599 aa	Known RBP	4.7	□□□□□ -1.66
ATG5	YPL149W	BCD1	P38772	366 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	YEL076C	P39971	216 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	IRC24	P40580	263 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	BAP3	P41815	604 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	PIP2	P52960	996 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	TAN1	P53072	289 aa	Predicted RBP	4.7	□□□□□ -1.66
ATG5	YPL149W	MTD1	Q02046	320 aa	Known RBP	4.7	□□□□□ -1.66
ATG5	YPL149W	THI22	Q06490	572 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	YLR040C	Q07988	224 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	ESC8	Q08119	714 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	NUR1	Q12066	484 aa		4.7	□□□□□ -1.66
ATG5	YPL149W	GAL1	P04385	528 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	PHO3	P24031	467 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	PRP22	P24384	1145 aa	Known RBP	4.69	□□□□□ -1.66
ATG5	YPL149W	YPT7	P32939	208 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	YKL133C	P36066	463 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	KTR4	P38131	464 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	SUL1	P38359	859 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	YIL092W	P40497	633 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	IRC5	P43610	853 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	TAF1	P46677	1066 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	YJL163C	P46996	555 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	SPO1	P53541	631 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	NSE5	Q03718	556 aa		4.69	□□□□□ -1.66
ATG5	YPL149W	ALG7	P07286	448 aa		4.68	□□□□□ -1.66
ATG5	YPL149W	DEF1	P35732	738 aa	Known RBP	4.68	□□□□□ -1.66
ATG5	YPL149W	SFB3	P38810	929 aa		4.68	□□□□□ -1.66
ATG5	YPL149W	YIL077C	P40508	320 aa		4.68	□□□□□ -1.66
ATG5	YPL149W	UBC11	P52492	156 aa		4.68	□□□□□ -1.66
ATG5	YPL149W	PAN2	P53010	1115 aa	Predicted RBP	4.68	□□□□□ -1.66
ATG5	YPL149W	CNM67	P53865	581 aa	Known RBP	4.68	□□□□□ -1.66
ATG5	YPL149W	RNT1	Q02555	471 aa		4.68	□□□□□ -1.66
ATG5	YPL149W	ADY4	Q05955	493 aa		4.68	□□□□□ -1.66
ATG5	YPL149W	MLC2	Q06580	163 aa		4.68	□□□□□ -1.66
ATG5	YPL149W	FEN2	P25621	512 aa	Known RBP	4.67	□□□□□ -1.66
ATG5	YPL149W	PTP2	P29461	750 aa		4.67	□□□□□ -1.66
ATG5	YPL149W	PRE4	P30657	266 aa		4.67	□□□□□ -1.66
ATG5	YPL149W	RIM4	P38741	713 aa		4.67	□□□□□ -1.66
ATG5	YPL149W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
ATG5	YPL149W	GIP4	P39732	760 aa		4.67	□□□□□ -1.66
ATG5	YPL149W	SAW1	P39735	261 aa		4.67	□□□□□ -1.66
ATG5	YPL149W	STL1	P39932	569 aa		4.67	□□□□□ -1.66
ATG5	YPL149W	PIG2	P40187	538 aa		4.67	□□□□□ -1.66
ATG5	YPL149W	SQS1	P53866	767 aa	Known RBP	4.67	□□□□□ -1.66
ATG5	YPL149W	PSF3	Q12146	194 aa		4.67	□□□□□ -1.66
ATG5	YPL149W	PIF1	P07271	859 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	PPR1	P07272	904 aa	Predicted RBP	4.66	□□□□□ -1.66
ATG5	YPL149W	TUP1	P16649	713 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	PMI40	P29952	429 aa	Known RBP	4.66	□□□□□ -1.66
ATG5	YPL149W	BCS1	P32839	456 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	COS111	P38308	924 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	REV7	P38927	245 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	FMP52	P40008	231 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	PRM2	P40534	656 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	HIS6	P40545	261 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	ASK10	P48361	1146 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	RFX1	P48743	811 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	KIN4	Q01919	800 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	VPS5	Q92331	675 aa		4.66	□□□□□ -1.66
ATG5	YPL149W	HMG2	P12684	1045 aa		4.65	□□□□□ -1.67
ATG5	YPL149W	MTC7	P32633	139 aa		4.65	□□□□□ -1.67
ATG5	YPL149W	TRM2	P33753	639 aa		4.65	□□□□□ -1.67
ATG5	YPL149W	PPS1	P38148	807 aa		4.65	□□□□□ -1.67
ATG5	YPL149W	SCS2	P40075	244 aa	Known RBP	4.65	□□□□□ -1.67
ATG5	YPL149W	AIM21	P40563	679 aa		4.65	□□□□□ -1.67
ATG5	YPL149W	UBX4	P54730	416 aa		4.65	□□□□□ -1.67
ATG5	YPL149W	CEG1	Q01159	459 aa	Predicted RBP	4.65	□□□□□ -1.67
ATG5	YPL149W	YFT2	Q06676	274 aa		4.65	□□□□□ -1.67
ATG5	YPL149W	YOL073C	Q08232	322 aa		4.65	□□□□□ -1.67
ATG5	YPL149W	RTK1	Q12100	620 aa	Predicted RBP	4.65	□□□□□ -1.67
ATG5	YPL149W	CHS5	Q12114	671 aa	Known RBP	4.65	□□□□□ -1.67
ATG5	YPL149W	YOL114C	Q12322	202 aa		4.65	□□□□□ -1.67
ATG5	YPL149W	ZRT2	Q12436	422 aa		4.65	□□□□□ -1.67
ATG5	YPL149W	YKL033W-A	Q86ZR7	236 aa		4.65	□□□□□ -1.67
ATG5	YPL149W	PGI1	P12709	554 aa	Known RBP	4.64	□□□□□ -1.67
ATG5	YPL149W	PHO11	P35842	467 aa		4.64	□□□□□ -1.67
ATG5	YPL149W	YKL222C	P35995	705 aa		4.64	□□□□□ -1.67
ATG5	YPL149W	PHO12	P38693	467 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 77.4 ms