RNA–Protein interactions for RNA: YOR129C

AFI1, Transcript of Arf3p polarization-specific docking factor, yeastyeast

Gene AFI1, Length 2,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFI1YOR129C SPC19Q03954 165 aa2.53□□□□□ -2
AFI1YOR129C HIM1Q06674 414 aa2.53□□□□□ -2
AFI1YOR129C STP4Q07351 490 aa2.53□□□□□ -2
AFI1YOR129C ISA1Q07821 250 aaPredicted RBP2.53□□□□□ -2
AFI1YOR129C RRI2Q12348 645 aa2.53□□□□□ -2
AFI1YOR129C RPS17AP02407 136 aaKnown RBP2.53□□□□□ -2.01
AFI1YOR129C CDC6P09119 513 aa2.53□□□□□ -2.01
AFI1YOR129C RPS17BP14127 136 aaKnown RBP2.53□□□□□ -2.01
AFI1YOR129C SED4P25365 1065 aa2.53□□□□□ -2.01
AFI1YOR129C PET309P32522 965 aaPredicted RBP2.53□□□□□ -2.01
AFI1YOR129C PEX5P35056 612 aa2.53□□□□□ -2.01
AFI1YOR129C RRN3P36070 627 aa2.53□□□□□ -2.01
AFI1YOR129C FOL2P51601 243 aaKnown RBP2.53□□□□□ -2.01
AFI1YOR129C TEP1P53916 434 aa2.53□□□□□ -2.01
AFI1YOR129C YNL058CP53947 316 aa2.53□□□□□ -2.01
AFI1YOR129C ORC4P54791 529 aa2.53□□□□□ -2.01
AFI1YOR129C HLR1Q04429 423 aa2.53□□□□□ -2.01
AFI1YOR129C YLR352WQ06479 807 aa2.53□□□□□ -2.01
AFI1YOR129C RRP9Q06506 573 aaKnown RBP2.53□□□□□ -2.01
AFI1YOR129C YPR172WQ06608 200 aa2.53□□□□□ -2.01
AFI1YOR129C YEL076C-AP0CX16 216 aa2.52□□□□□ -2.01
AFI1YOR129C YLR464WP0CX17 216 aa2.52□□□□□ -2.01
AFI1YOR129C ADE2P21264 571 aaKnown RBP2.52□□□□□ -2.01
AFI1YOR129C PHO3P24031 467 aa2.52□□□□□ -2.01
AFI1YOR129C SEC21P32074 935 aaKnown RBP2.52□□□□□ -2.01
AFI1YOR129C YKR073CP36153 106 aa2.52□□□□□ -2.01
AFI1YOR129C APE4P38821 490 aa2.52□□□□□ -2.01
AFI1YOR129C STL1P39932 569 aa2.52□□□□□ -2.01
AFI1YOR129C YEL076CP39971 216 aa2.52□□□□□ -2.01
AFI1YOR129C CHA4P43634 648 aa2.52□□□□□ -2.01
AFI1YOR129C PUS4P48567 403 aaKnown RBP2.52□□□□□ -2.01
AFI1YOR129C ASI2P53895 289 aa2.52□□□□□ -2.01
AFI1YOR129C MTD1Q02046 320 aaKnown RBP2.52□□□□□ -2.01
AFI1YOR129C VTI1Q04338 217 aa2.52□□□□□ -2.01
AFI1YOR129C PSR2Q07949 397 aa2.52□□□□□ -2.01
AFI1YOR129C CHD1P32657 1468 aa2.52□□□□□ -2.01
AFI1YOR129C ADH4P10127 382 aa2.52□□□□□ -2.01
AFI1YOR129C KRR1P25586 316 aaPredicted RBP2.52□□□□□ -2.01
AFI1YOR129C SHM2P37291 469 aaKnown RBP2.52□□□□□ -2.01
AFI1YOR129C TOS1P38288 455 aa2.52□□□□□ -2.01
AFI1YOR129C YNL195CP40168 261 aa2.52□□□□□ -2.01
AFI1YOR129C KEL2P50090 882 aa2.52□□□□□ -2.01
AFI1YOR129C MRPS35P53292 345 aa2.52□□□□□ -2.01
AFI1YOR129C HOL1P53389 586 aa2.52□□□□□ -2.01
AFI1YOR129C TRS130Q03660 1102 aa2.52□□□□□ -2.01
AFI1YOR129C HMI1Q12039 706 aa2.52□□□□□ -2.01
AFI1YOR129C RTK1Q12100 620 aaPredicted RBP2.52□□□□□ -2.01
AFI1YOR129C HIS5P07172 385 aa2.51□□□□□ -2.01
AFI1YOR129C ACO1P19414 778 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
AFI1YOR129C CDC60P26637 1090 aaKnown RBP2.51□□□□□ -2.01
AFI1YOR129C SSH4P32343 579 aa2.51□□□□□ -2.01
AFI1YOR129C BEM3P32873 1128 aa2.51□□□□□ -2.01
AFI1YOR129C YPT7P32939 208 aa2.51□□□□□ -2.01
AFI1YOR129C APN2P38207 520 aa2.51□□□□□ -2.01
AFI1YOR129C YHR112CP38716 378 aa2.51□□□□□ -2.01
AFI1YOR129C DUN1P39009 513 aa2.51□□□□□ -2.01
AFI1YOR129C SCS2P40075 244 aaKnown RBP2.51□□□□□ -2.01
AFI1YOR129C MAD2P40958 196 aa2.51□□□□□ -2.01
AFI1YOR129C PRP31P49704 494 aaPredicted RBP2.51□□□□□ -2.01
AFI1YOR129C ARG5,6Q01217 863 aa2.51□□□□□ -2.01
AFI1YOR129C VTC3Q02725 835 aa2.51□□□□□ -2.01
AFI1YOR129C DUS4Q06063 367 aa2.51□□□□□ -2.01
AFI1YOR129C TSR2Q06672 205 aaKnown RBP2.51□□□□□ -2.01
AFI1YOR129C VIP1Q06685 1146 aaKnown RBP2.51□□□□□ -2.01
AFI1YOR129C VHS3Q08438 674 aa2.51□□□□□ -2.01
AFI1YOR129C SSP2Q08646 371 aa2.51□□□□□ -2.01
AFI1YOR129C DIN7Q12086 430 aa2.51□□□□□ -2.01
AFI1YOR129C ARP7Q12406 477 aa2.51□□□□□ -2.01
AFI1YOR129C MSH1P25846 959 aa2.51□□□□□ -2.01
AFI1YOR129C DGR2P32330 852 aa2.51□□□□□ -2.01
AFI1YOR129C VPH1P32563 840 aaKnown RBP2.51□□□□□ -2.01
AFI1YOR129C YKL100CP34248 587 aa2.51□□□□□ -2.01
AFI1YOR129C APL2P36000 726 aaPredicted RBP2.51□□□□□ -2.01
AFI1YOR129C LAM1P38851 1228 aa2.51□□□□□ -2.01
AFI1YOR129C CAJ1P39101 391 aa2.51□□□□□ -2.01
AFI1YOR129C MAD3P47074 515 aa2.51□□□□□ -2.01
AFI1YOR129C SGD1Q06132 899 aa2.51□□□□□ -2.01
AFI1YOR129C VPS36Q06696 566 aa2.51□□□□□ -2.01
AFI1YOR129C PYC1P11154 1178 aaKnown RBP2.5□□□□□ -2.01
AFI1YOR129C FRS1P15624 595 aaKnown RBP2.5□□□□□ -2.01
AFI1YOR129C PHO81P17442 1178 aa2.5□□□□□ -2.01
AFI1YOR129C ERG6P25087 383 aaKnown RBP2.5□□□□□ -2.01
AFI1YOR129C GFD2P25370 566 aaKnown RBP2.5□□□□□ -2.01
AFI1YOR129C EMC1P25574 760 aa2.5□□□□□ -2.01
AFI1YOR129C PET127P32606 800 aa2.5□□□□□ -2.01
AFI1YOR129C YKL050CP35736 922 aa2.5□□□□□ -2.01
AFI1YOR129C RXT2P38255 430 aa2.5□□□□□ -2.01
AFI1YOR129C MEF2P39677 819 aa2.5□□□□□ -2.01
AFI1YOR129C SWD1P39706 426 aa2.5□□□□□ -2.01
AFI1YOR129C SPC72P39723 622 aa2.5□□□□□ -2.01
AFI1YOR129C SAW1P39735 261 aa2.5□□□□□ -2.01
AFI1YOR129C IMA5P40884 581 aa2.5□□□□□ -2.01
AFI1YOR129C BUD8P41698 603 aa2.5□□□□□ -2.01
AFI1YOR129C CTH1P47976 325 aa2.5□□□□□ -2.01
AFI1YOR129C EXG2P52911 562 aa2.5□□□□□ -2.01
AFI1YOR129C MNT2P53059 558 aa2.5□□□□□ -2.01
AFI1YOR129C YBP2P53169 641 aa2.5□□□□□ -2.01
AFI1YOR129C TIM11P81449 96 aaPredicted RBP2.5□□□□□ -2.01
AFI1YOR129C HMO1Q03973 246 aaKnown RBP2.5□□□□□ -2.01
AFI1YOR129C IRC3Q06683 689 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms