RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeastyeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MVP1YMR004W CCT5P40413 562 aaKnown RBP2.38□□□□□ -2.03
MVP1YMR004W RSC8P43609 557 aaKnown RBP2.38□□□□□ -2.03
MVP1YMR004W HFD1Q04458 532 aa2.38□□□□□ -2.03
MVP1YMR004W THI4P32318 326 aa2.37□□□□□ -2.03
MVP1YMR004W APL3P38065 1025 aa2.37□□□□□ -2.03
MVP1YMR004W MAL31P38156 614 aa2.37□□□□□ -2.03
MVP1YMR004W PMC1P38929 1173 aaPredicted RBP2.37□□□□□ -2.03
MVP1YMR004W MIT1P40002 666 aa2.37□□□□□ -2.03
MVP1YMR004W PSA1P41940 361 aaKnown RBP2.37□□□□□ -2.03
MVP1YMR004W SET2P46995 733 aaKnown RBP2.37□□□□□ -2.03
MVP1YMR004W IRC8P47046 822 aa2.37□□□□□ -2.03
MVP1YMR004W MAL11P53048 616 aa2.37□□□□□ -2.03
MVP1YMR004W GIS2P53849 153 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
MVP1YMR004W ERR1P0CX10 437 aa2.37□□□□□ -2.03
MVP1YMR004W ERR2P0CX11 437 aa2.37□□□□□ -2.03
MVP1YMR004W RAD18P10862 487 aa2.37□□□□□ -2.03
MVP1YMR004W PRP22P24384 1145 aaKnown RBP2.37□□□□□ -2.03
MVP1YMR004W PEX6P33760 1030 aa2.37□□□□□ -2.03
MVP1YMR004W MPS3P47069 682 aa2.37□□□□□ -2.03
MVP1YMR004W YSH1Q06224 779 aaPredicted RBP2.37□□□□□ -2.03
MVP1YMR004W ULA1Q12059 462 aa2.37□□□□□ -2.03
MVP1YMR004W MDM20Q12387 796 aaKnown RBP2.37□□□□□ -2.03
MVP1YMR004W PHO5P00635 467 aa2.36□□□□□ -2.03
MVP1YMR004W TPK2P06245 380 aa2.36□□□□□ -2.03
MVP1YMR004W SRD1P09007 221 aa2.36□□□□□ -2.03
MVP1YMR004W MIH1P23748 554 aa2.36□□□□□ -2.03
MVP1YMR004W KIN82P25341 720 aa2.36□□□□□ -2.03
MVP1YMR004W VBA3P25594 458 aa2.36□□□□□ -2.03
MVP1YMR004W FEN2P25621 512 aaKnown RBP2.36□□□□□ -2.03
MVP1YMR004W MSH2P25847 964 aa2.36□□□□□ -2.03
MVP1YMR004W SFP1P32432 683 aa2.36□□□□□ -2.03
MVP1YMR004W SEC6P32844 805 aa2.36□□□□□ -2.03
MVP1YMR004W HOT13P36078 116 aa2.36□□□□□ -2.03
MVP1YMR004W PBP2P38151 413 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
MVP1YMR004W CTP1P38152 299 aa2.36□□□□□ -2.03
MVP1YMR004W YNL195CP40168 261 aa2.36□□□□□ -2.03
MVP1YMR004W NUP82P40368 713 aa2.36□□□□□ -2.03
MVP1YMR004W THI6P41835 540 aa2.36□□□□□ -2.03
MVP1YMR004W PMT6P42934 759 aa2.36□□□□□ -2.03
MVP1YMR004W ASN1P49089 572 aaKnown RBP2.36□□□□□ -2.03
MVP1YMR004W NMA2P53204 395 aa2.36□□□□□ -2.03
MVP1YMR004W PPN1Q04119 674 aa2.36□□□□□ -2.03
MVP1YMR004W UTP14Q04500 899 aaKnown RBP2.36□□□□□ -2.03
MVP1YMR004W RKI1Q12189 258 aa2.36□□□□□ -2.03
MVP1YMR004W LAM4P38800 1345 aa2.36□□□□□ -2.03
MVP1YMR004W TIM23P32897 222 aa2.35□□□□□ -2.03
MVP1YMR004W YHR097CP38809 366 aaKnown RBP2.35□□□□□ -2.03
MVP1YMR004W KHA1P40309 873 aa2.35□□□□□ -2.03
MVP1YMR004W RFX1P48743 811 aa2.35□□□□□ -2.03
MVP1YMR004W ARP4P80428 489 aa2.35□□□□□ -2.03
MVP1YMR004W NGL2Q03264 515 aaKnown RBP2.35□□□□□ -2.03
MVP1YMR004W VBA4Q04602 768 aaKnown RBP2.35□□□□□ -2.03
MVP1YMR004W POM34Q12445 299 aa2.35□□□□□ -2.03
MVP1YMR004W RPS9BP05755 195 aaKnown RBP2.34□□□□□ -2.03
MVP1YMR004W ECM32P32644 1121 aaKnown RBP2.34□□□□□ -2.03
MVP1YMR004W YIL077CP40508 320 aa2.34□□□□□ -2.03
MVP1YMR004W BRE5P53741 515 aaKnown RBP2.34□□□□□ -2.03
MVP1YMR004W DAK1P54838 584 aaKnown RBP2.34□□□□□ -2.03
MVP1YMR004W LEE1Q02799 301 aaKnown RBP2.34□□□□□ -2.03
MVP1YMR004W YDR179W-AQ03983 463 aa2.34□□□□□ -2.03
MVP1YMR004W UFO1Q04511 668 aa2.34□□□□□ -2.03
MVP1YMR004W ORM2Q06144 216 aa2.34□□□□□ -2.03
MVP1YMR004W IRC3Q06683 689 aa2.34□□□□□ -2.03
MVP1YMR004W ISA1Q07821 250 aaPredicted RBP2.34□□□□□ -2.03
MVP1YMR004W NOP1P15646 327 aaKnown RBP2.33□□□□□ -2.04
MVP1YMR004W PET127P32606 800 aa2.33□□□□□ -2.04
MVP1YMR004W OCA5P38738 679 aa2.33□□□□□ -2.04
MVP1YMR004W SSZ1P38788 538 aaKnown RBP2.33□□□□□ -2.04
MVP1YMR004W DIP5P53388 608 aa2.33□□□□□ -2.04
MVP1YMR004W CEF1Q03654 590 aaPredicted RBP2.33□□□□□ -2.04
MVP1YMR004W GIN4Q12263 1142 aa2.33□□□□□ -2.04
MVP1YMR004W MEF1P25039 761 aa2.32□□□□□ -2.04
MVP1YMR004W MNN4P36044 1178 aa2.32□□□□□ -2.04
MVP1YMR004W AKL1P38080 1108 aaKnown RBP2.32□□□□□ -2.04
MVP1YMR004W COS111P38308 924 aa2.32□□□□□ -2.04
MVP1YMR004W YJR039WP47107 1121 aa2.32□□□□□ -2.04
MVP1YMR004W YFT2Q06676 274 aa2.32□□□□□ -2.04
MVP1YMR004W GUD1Q07729 489 aa2.32□□□□□ -2.04
MVP1YMR004W NEW1Q08972 1196 aaKnown RBP2.32□□□□□ -2.04
MVP1YMR004W YTA7P40340 1379 aa2.32□□□□□ -2.04
MVP1YMR004W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
MVP1YMR004W YHR202WP38887 602 aa2.32□□□□□ -2.04
MVP1YMR004W BUD6P41697 788 aa2.32□□□□□ -2.04
MVP1YMR004W ENP2P48234 707 aaKnown RBP2.32□□□□□ -2.04
MVP1YMR004W YMR210WQ03649 449 aa2.32□□□□□ -2.04
MVP1YMR004W ATG33Q06485 197 aa2.32□□□□□ -2.04
MVP1YMR004W VPS36Q06696 566 aa2.32□□□□□ -2.04
MVP1YMR004W VHS3Q08438 674 aa2.32□□□□□ -2.04
MVP1YMR004W HMG1P12683 1054 aa2.31□□□□□ -2.04
MVP1YMR004W FRS1P15624 595 aaKnown RBP2.31□□□□□ -2.04
MVP1YMR004W MSS1P32559 526 aaPredicted RBP2.31□□□□□ -2.04
MVP1YMR004W PPG1P32838 368 aa2.31□□□□□ -2.04
MVP1YMR004W RRP14P36080 434 aaKnown RBP2.31□□□□□ -2.04
MVP1YMR004W TDA3P38758 523 aa2.31□□□□□ -2.04
MVP1YMR004W PIH1P38768 344 aa2.31□□□□□ -2.04
MVP1YMR004W CCT4P39078 528 aaKnown RBP2.31□□□□□ -2.04
MVP1YMR004W BIT61P47041 543 aa2.31□□□□□ -2.04
MVP1YMR004W SPO1P53541 631 aa2.31□□□□□ -2.04
MVP1YMR004W SNF12P53628 566 aa2.31□□□□□ -2.04
MVP1YMR004W CPR8P53728 308 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms