RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C MGS1P40151 587 aa4.45□□□□□ -1.7
SRP40YKR092C MTR3P48240 250 aaPredicted RBP4.45□□□□□ -1.7
SRP40YKR092C UBC9P50623 157 aaPredicted RBP4.45□□□□□ -1.7
SRP40YKR092C MDM1Q01846 1127 aa4.45□□□□□ -1.7
SRP40YKR092C SLU7Q02775 382 aaKnown RBP4.45□□□□□ -1.7
SRP40YKR092C MUS81Q04149 632 aaPredicted RBP4.45□□□□□ -1.7
SRP40YKR092C THI73Q07904 523 aa4.45□□□□□ -1.7
SRP40YKR092C RUD3Q12234 484 aaKnown RBP4.45□□□□□ -1.7
SRP40YKR092C TUB3P09734 445 aaKnown RBP4.44□□□□□ -1.7
SRP40YKR092C HMG1P12683 1054 aa4.44□□□□□ -1.7
SRP40YKR092C MIH1P23748 554 aa4.44□□□□□ -1.7
SRP40YKR092C DCG1P32460 244 aa4.44□□□□□ -1.7
SRP40YKR092C EFB1P32471 206 aaKnown RBP4.44□□□□□ -1.7
SRP40YKR092C NGG1P32494 702 aa4.44□□□□□ -1.7
SRP40YKR092C VPS24P36095 224 aaKnown RBP4.44□□□□□ -1.7
SRP40YKR092C YHR218WP38899 603 aa4.44□□□□□ -1.7
SRP40YKR092C BNA2P47125 453 aa4.44□□□□□ -1.7
SRP40YKR092C PMT3P47190 753 aa4.44□□□□□ -1.7
SRP40YKR092C GPI8P49018 411 aa4.44□□□□□ -1.7
SRP40YKR092C KEL2P50090 882 aa4.44□□□□□ -1.7
SRP40YKR092C ASI2P53895 289 aa4.44□□□□□ -1.7
SRP40YKR092C VTC3Q02725 835 aa4.44□□□□□ -1.7
SRP40YKR092C ECM16Q04217 1267 aaKnown RBP4.44□□□□□ -1.7
SRP40YKR092C RRB1Q04225 511 aaKnown RBP4.44□□□□□ -1.7
SRP40YKR092C VMS1Q04311 632 aaKnown RBP4.44□□□□□ -1.7
SRP40YKR092C RRP9Q06506 573 aaKnown RBP4.44□□□□□ -1.7
SRP40YKR092C ENB1Q08299 606 aa4.44□□□□□ -1.7
SRP40YKR092C SNU66Q12420 587 aaPredicted RBP4.44□□□□□ -1.7
SRP40YKR092C YLR149CQ99296 730 aa4.44□□□□□ -1.7
SRP40YKR092C Q0142Q9ZZW4 58 aa4.44□□□□□ -1.7
SRP40YKR092C GDB1Q06625 1536 aa4.44□□□□□ -1.7
SRP40YKR092C MMS1Q06211 1407 aa4.44□□□□□ -1.7
SRP40YKR092C ARO1P08566 1588 aaKnown RBP4.44□□□□□ -1.7
SRP40YKR092C PFK1P16861 987 aaKnown RBP4.43□□□□□ -1.7
SRP40YKR092C TSR4P25040 408 aa4.43□□□□□ -1.7
SRP40YKR092C YKR051WP36142 418 aa4.43□□□□□ -1.7
SRP40YKR092C RPP1P38786 293 aa4.43□□□□□ -1.7
SRP40YKR092C PFA3P42836 336 aa4.43□□□□□ -1.7
SRP40YKR092C RSC8P43609 557 aaKnown RBP4.43□□□□□ -1.7
SRP40YKR092C YNL058CP53947 316 aa4.43□□□□□ -1.7
SRP40YKR092C LSP1Q12230 341 aaKnown RBP4.43□□□□□ -1.7
SRP40YKR092C TRM11Q12463 433 aa4.43□□□□□ -1.7
SRP40YKR092C NUP145P49687 1317 aa4.43□□□□□ -1.7
SRP40YKR092C CFT1Q06632 1357 aaKnown RBP4.42□□□□□ -1.7
SRP40YKR092C SUP35P05453 685 aaKnown RBP4.42□□□□□ -1.7
SRP40YKR092C THR4P16120 514 aaKnown RBP4.42□□□□□ -1.7
SRP40YKR092C PRP4P20053 465 aaKnown RBP4.42□□□□□ -1.7
SRP40YKR092C ARC19P33204 171 aaKnown RBP4.42□□□□□ -1.7
SRP40YKR092C TYS1P36421 394 aaKnown RBP4.42□□□□□ -1.7
SRP40YKR092C SWD1P39706 426 aa4.42□□□□□ -1.7
SRP40YKR092C BUD27P43573 796 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
SRP40YKR092C OCA1P50946 238 aaPredicted RBP4.42□□□□□ -1.7
SRP40YKR092C DSL1P53847 754 aa4.42□□□□□ -1.7
SRP40YKR092C SXM1Q04175 944 aaKnown RBP4.42□□□□□ -1.7
SRP40YKR092C PDS5Q04264 1277 aa4.42□□□□□ -1.7
SRP40YKR092C ASM4Q05166 528 aa4.42□□□□□ -1.7
SRP40YKR092C YOL057WQ08225 711 aa4.42□□□□□ -1.7
SRP40YKR092C YOR389WQ08912 624 aa4.42□□□□□ -1.7
SRP40YKR092C TY1B-JR2P47100 1755 aaKnown RBP4.42□□□□□ -1.7
SRP40YKR092C TY1B-ER2Q03619 1755 aa4.42□□□□□ -1.7
SRP40YKR092C TY1B-MR1Q04214 1755 aa4.42□□□□□ -1.7
SRP40YKR092C TY1B-MR2Q04670 1755 aaKnown RBP4.42□□□□□ -1.7
SRP40YKR092C TY1B-LR1Q12088 1755 aaKnown RBP4.42□□□□□ -1.7
SRP40YKR092C TY1B-NL1Q12112 1755 aa4.42□□□□□ -1.7
SRP40YKR092C TY1B-GR1Q12141 1755 aa4.42□□□□□ -1.7
SRP40YKR092C TY1B-BLQ12490 1755 aa4.42□□□□□ -1.7
SRP40YKR092C KAR3P17119 729 aa4.41□□□□□ -1.7
SRP40YKR092C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SRP40YKR092C CCR4P31384 837 aaKnown RBP4.41□□□□□ -1.7
SRP40YKR092C NIP100P33420 868 aa4.41□□□□□ -1.7
SRP40YKR092C CTF13P35203 478 aa4.41□□□□□ -1.7
SRP40YKR092C CKB2P38930 258 aa4.41□□□□□ -1.7
SRP40YKR092C UBP12P39538 1254 aa4.41□□□□□ -1.7
SRP40YKR092C YJR096WP47137 282 aa4.41□□□□□ -1.7
SRP40YKR092C YGR237CP50089 785 aa4.41□□□□□ -1.7
SRP40YKR092C YBP2P53169 641 aa4.41□□□□□ -1.7
SRP40YKR092C BTN2P53286 410 aa4.41□□□□□ -1.7
SRP40YKR092C ORC4P54791 529 aa4.41□□□□□ -1.7
SRP40YKR092C UME1Q03010 460 aa4.41□□□□□ -1.7
SRP40YKR092C LAS17Q12446 633 aa4.41□□□□□ -1.7
SRP40YKR092C IQG1Q12280 1495 aa4.41□□□□□ -1.7
SRP40YKR092C YLR415CO13578 112 aa4.4□□□□□ -1.71
SRP40YKR092C CYB2P00175 591 aa4.4□□□□□ -1.71
SRP40YKR092C PMA1P05030 918 aaKnown RBP4.4□□□□□ -1.71
SRP40YKR092C CDC31P06704 161 aaKnown RBP4.4□□□□□ -1.71
SRP40YKR092C HCM1P25364 564 aa4.4□□□□□ -1.71
SRP40YKR092C PRP19P32523 503 aaKnown RBP4.4□□□□□ -1.71
SRP40YKR092C BYE1P36106 594 aa4.4□□□□□ -1.71
SRP40YKR092C YKR018CP36114 725 aa4.4□□□□□ -1.71
SRP40YKR092C PES4P39684 611 aa4.4□□□□□ -1.71
SRP40YKR092C MEP1P40260 492 aa4.4□□□□□ -1.71
SRP40YKR092C SMC3P47037 1230 aa4.4□□□□□ -1.71
SRP40YKR092C PHO23P50947 330 aa4.4□□□□□ -1.71
SRP40YKR092C JJJ1P53863 590 aa4.4□□□□□ -1.71
SRP40YKR092C TIM11P81449 96 aaPredicted RBP4.4□□□□□ -1.71
SRP40YKR092C GPR1Q12361 961 aa4.4□□□□□ -1.71
SRP40YKR092C PNS1Q12412 539 aa4.4□□□□□ -1.71
SRP40YKR092C TY3B-IQ7LHG5 1498 aaKnown RBP4.4□□□□□ -1.71
SRP40YKR092C NTE1Q04958 1679 aa4.39□□□□□ -1.71
SRP40YKR092C RPP0P05317 312 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms