RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W TAF1P46677 1066 aa5.35□□□□□ -1.55
MSH1YHR120W SLG1P54867 378 aa5.35□□□□□ -1.55
MSH1YHR120W VTI1Q04338 217 aa5.35□□□□□ -1.55
MSH1YHR120W CDC8P00572 216 aa5.34□□□□□ -1.55
MSH1YHR120W ECM32P32644 1121 aaKnown RBP5.34□□□□□ -1.55
MSH1YHR120W SIF2P38262 535 aa5.34□□□□□ -1.55
MSH1YHR120W BFA1P47113 574 aa5.34□□□□□ -1.55
MSH1YHR120W STE20Q03497 939 aaKnown RBP5.34□□□□□ -1.55
MSH1YHR120W RIO1Q12196 484 aaKnown RBP5.34□□□□□ -1.55
MSH1YHR120W HRT3Q12347 344 aa5.34□□□□□ -1.55
MSH1YHR120W ECM3Q99252 613 aa5.34□□□□□ -1.55
MSH1YHR120W HMG2P12684 1045 aa5.34□□□□□ -1.55
MSH1YHR120W PDE1P22434 369 aa5.34□□□□□ -1.55
MSH1YHR120W PDC6P26263 563 aaKnown RBP5.34□□□□□ -1.55
MSH1YHR120W PPZ1P26570 692 aa5.34□□□□□ -1.55
MSH1YHR120W GAC1P28006 793 aa5.34□□□□□ -1.55
MSH1YHR120W KIP1P28742 1111 aa5.34□□□□□ -1.55
MSH1YHR120W PAP1P29468 568 aaKnown RBP5.34□□□□□ -1.55
MSH1YHR120W KDX1P36005 433 aa5.34□□□□□ -1.55
MSH1YHR120W CWC2Q12046 339 aaPredicted RBP5.34□□□□□ -1.55
MSH1YHR120W RRD2Q12461 358 aa5.34□□□□□ -1.55
MSH1YHR120W EFB1P32471 206 aaKnown RBP5.34□□□□□ -1.56
MSH1YHR120W FRE1P32791 686 aa5.34□□□□□ -1.56
MSH1YHR120W SHE3P38272 425 aaKnown RBP5.34□□□□□ -1.56
MSH1YHR120W SDS3P40505 327 aa5.34□□□□□ -1.56
MSH1YHR120W SBE2P42223 864 aaKnown RBP5.34□□□□□ -1.56
MSH1YHR120W VNX1P42839 908 aa5.34□□□□□ -1.56
MSH1YHR120W YJR054WP47114 497 aa5.34□□□□□ -1.56
MSH1YHR120W MUB1Q03162 620 aa5.34□□□□□ -1.56
MSH1YHR120W AI5_BETAQ9ZZX0 354 aa5.34□□□□□ -1.56
MSH1YHR120W TUP1P16649 713 aa5.33□□□□□ -1.56
MSH1YHR120W SAT4P25333 603 aaKnown RBP5.33□□□□□ -1.56
MSH1YHR120W TKL2P33315 681 aa5.33□□□□□ -1.56
MSH1YHR120W YBR056WP38081 501 aa5.33□□□□□ -1.56
MSH1YHR120W YSW1P38280 609 aa5.33□□□□□ -1.56
MSH1YHR120W GEM1P39722 662 aa5.33□□□□□ -1.56
MSH1YHR120W DSE1P40077 573 aa5.33□□□□□ -1.56
MSH1YHR120W YNL011CP53980 444 aa5.33□□□□□ -1.56
MSH1YHR120W MZM1Q03429 123 aaPredicted RBP5.33□□□□□ -1.56
MSH1YHR120W PRM6Q04705 352 aa5.33□□□□□ -1.56
MSH1YHR120W YDR344CQ05510 147 aa5.33□□□□□ -1.56
MSH1YHR120W SIL1Q08199 421 aa5.33□□□□□ -1.56
MSH1YHR120W GPM2Q12008 311 aa5.33□□□□□ -1.56
MSH1YHR120W TAF10Q12030 206 aa5.33□□□□□ -1.56
MSH1YHR120W DAL2P25335 343 aa5.33□□□□□ -1.56
MSH1YHR120W CDC10P25342 322 aaKnown RBP5.33□□□□□ -1.56
MSH1YHR120W IMG2P25642 146 aaPredicted RBP5.33□□□□□ -1.56
MSH1YHR120W SET5P38890 526 aaKnown RBP5.33□□□□□ -1.56
MSH1YHR120W SOV1Q04748 898 aa5.33□□□□□ -1.56
MSH1YHR120W BET2P20133 325 aa5.32□□□□□ -1.56
MSH1YHR120W VBA3P25594 458 aa5.32□□□□□ -1.56
MSH1YHR120W MET4P32389 672 aa5.32□□□□□ -1.56
MSH1YHR120W VBA5P36172 582 aa5.32□□□□□ -1.56
MSH1YHR120W GDT1P38301 280 aaPredicted RBP5.32□□□□□ -1.56
MSH1YHR120W YJR039WP47107 1121 aa5.32□□□□□ -1.56
MSH1YHR120W VPS25P47142 202 aa5.32□□□□□ -1.56
MSH1YHR120W CWC22P53333 577 aaKnown RBP5.32□□□□□ -1.56
MSH1YHR120W HER2Q03557 464 aa5.32□□□□□ -1.56
MSH1YHR120W PML39Q03760 334 aa5.32□□□□□ -1.56
MSH1YHR120W FMP25Q08023 583 aa5.32□□□□□ -1.56
MSH1YHR120W SPE3Q12074 293 aaKnown RBP5.32□□□□□ -1.56
MSH1YHR120W XRS2P33301 854 aa5.32□□□□□ -1.56
MSH1YHR120W CSG2P35206 410 aa5.32□□□□□ -1.56
MSH1YHR120W RCK2P38623 610 aa5.32□□□□□ -1.56
MSH1YHR120W VPS70P47161 811 aa5.32□□□□□ -1.56
MSH1YHR120W YML119WQ03208 357 aa5.32□□□□□ -1.56
MSH1YHR120W RAD1P06777 1100 aa5.31□□□□□ -1.56
MSH1YHR120W RPB2P08518 1224 aaKnown RBP5.31□□□□□ -1.56
MSH1YHR120W PEX34P25584 144 aa5.31□□□□□ -1.56
MSH1YHR120W YKL097CP34245 136 aa5.31□□□□□ -1.56
MSH1YHR120W LAS1P36146 502 aaPredicted RBP5.31□□□□□ -1.56
MSH1YHR120W DRN1P53255 507 aaKnown RBP5.31□□□□□ -1.56
MSH1YHR120W ESBP6P53918 673 aa5.31□□□□□ -1.56
MSH1YHR120W ECI1Q05871 280 aa5.31□□□□□ -1.56
MSH1YHR120W YPR078CQ06813 372 aa5.31□□□□□ -1.56
MSH1YHR120W YPL225WQ08971 146 aaKnown RBP5.31□□□□□ -1.56
MSH1YHR120W YKR051WP36142 418 aa5.31□□□□□ -1.56
MSH1YHR120W DYS1P38791 387 aa5.31□□□□□ -1.56
MSH1YHR120W SFB3P38810 929 aa5.31□□□□□ -1.56
MSH1YHR120W DSN1P40568 576 aa5.31□□□□□ -1.56
MSH1YHR120W HXT8P40886 569 aa5.31□□□□□ -1.56
MSH1YHR120W LSB6P42951 607 aa5.31□□□□□ -1.56
MSH1YHR120W YGL036WP53185 909 aaPredicted RBP5.31□□□□□ -1.56
MSH1YHR120W LEE1Q02799 301 aaKnown RBP5.31□□□□□ -1.56
MSH1YHR120W TSR1Q07381 788 aaKnown RBP5.31□□□□□ -1.56
MSH1YHR120W CCH1P50077 2039 aa5.31□□□□□ -1.56
MSH1YHR120W NIP100P33420 868 aa5.3□□□□□ -1.56
MSH1YHR120W COY1P34237 679 aa5.3□□□□□ -1.56
MSH1YHR120W NOP4P37838 685 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W SPP381P38282 291 aaPredicted RBP5.3□□□□□ -1.56
MSH1YHR120W RAD55P38953 406 aa5.3□□□□□ -1.56
MSH1YHR120W TRS85P46944 698 aa5.3□□□□□ -1.56
MSH1YHR120W YGR021WP53212 290 aa5.3□□□□□ -1.56
MSH1YHR120W SYH1Q02875 849 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W NSE5Q03718 556 aa5.3□□□□□ -1.56
MSH1YHR120W YML082WQ04533 649 aaKnown RBP5.3□□□□□ -1.56
MSH1YHR120W YLR001CQ07895 862 aa5.3□□□□□ -1.56
MSH1YHR120W ARD1P07347 238 aaPredicted RBP5.3□□□□□ -1.56
MSH1YHR120W RAM1P22007 431 aa5.3□□□□□ -1.56
MSH1YHR120W RAD16P31244 790 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms