RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C MVD1P32377 396 aaKnown RBP5.69□□□□□ -1.5
SCL1YGL011C HIS7P33734 552 aaKnown RBP5.69□□□□□ -1.5
SCL1YGL011C HRB1P38922 454 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
SCL1YGL011C AIM21P40563 679 aa5.69□□□□□ -1.5
SCL1YGL011C UBC11P52492 156 aa5.69□□□□□ -1.5
SCL1YGL011C NGL1Q08213 363 aaKnown RBP5.69□□□□□ -1.5
SCL1YGL011C PEX15Q08215 383 aa5.69□□□□□ -1.5
SCL1YGL011C PPR1P07272 904 aaPredicted RBP5.68□□□□□ -1.5
SCL1YGL011C SUN4P53616 420 aa5.68□□□□□ -1.5
SCL1YGL011C VBA4Q04602 768 aaKnown RBP5.68□□□□□ -1.5
SCL1YGL011C YOL073CQ08232 322 aa5.68□□□□□ -1.5
SCL1YGL011C MF(ALPHA)2P32435 120 aa5.67□□□□□ -1.5
SCL1YGL011C HIR1P32479 840 aa5.67□□□□□ -1.5
SCL1YGL011C EMP65P40085 556 aa5.67□□□□□ -1.5
SCL1YGL011C TAF4P50105 388 aa5.67□□□□□ -1.5
SCL1YGL011C PAN2P53010 1115 aaPredicted RBP5.67□□□□□ -1.5
SCL1YGL011C DIA2Q08496 732 aaPredicted RBP5.67□□□□□ -1.5
SCL1YGL011C POM34Q12445 299 aa5.67□□□□□ -1.5
SCL1YGL011C RPS9BP05755 195 aaKnown RBP5.66□□□□□ -1.5
SCL1YGL011C ACO1P19414 778 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
SCL1YGL011C PPS1P38148 807 aa5.66□□□□□ -1.5
SCL1YGL011C SFB3P38810 929 aa5.66□□□□□ -1.5
SCL1YGL011C EAF5P39995 279 aa5.66□□□□□ -1.5
SCL1YGL011C PEA2P40091 420 aa5.66□□□□□ -1.5
SCL1YGL011C PXA1P41909 870 aa5.66□□□□□ -1.5
SCL1YGL011C OMS1Q06668 471 aa5.66□□□□□ -1.5
SCL1YGL011C SLX4Q12098 748 aa5.66□□□□□ -1.5
SCL1YGL011C TUB2P02557 457 aaKnown RBP5.65□□□□□ -1.5
SCL1YGL011C KIN82P25341 720 aa5.65□□□□□ -1.5
SCL1YGL011C DGR2P32330 852 aa5.65□□□□□ -1.5
SCL1YGL011C BCS1P32839 456 aa5.65□□□□□ -1.5
SCL1YGL011C SEC6P32844 805 aa5.65□□□□□ -1.5
SCL1YGL011C YHR033WP38690 423 aa5.65□□□□□ -1.5
SCL1YGL011C FMP52P40008 231 aa5.65□□□□□ -1.5
SCL1YGL011C YIL077CP40508 320 aa5.65□□□□□ -1.5
SCL1YGL011C ATG36P46983 293 aa5.65□□□□□ -1.5
SCL1YGL011C MSE1P48525 536 aa5.65□□□□□ -1.5
SCL1YGL011C NSE5Q03718 556 aa5.65□□□□□ -1.5
SCL1YGL011C CWC2Q12046 339 aaPredicted RBP5.65□□□□□ -1.5
SCL1YGL011C FEN2P25621 512 aaKnown RBP5.64□□□□□ -1.51
SCL1YGL011C REV7P38927 245 aa5.64□□□□□ -1.51
SCL1YGL011C IRC5P43610 853 aa5.64□□□□□ -1.51
SCL1YGL011C YMR206WQ03695 313 aa5.64□□□□□ -1.51
SCL1YGL011C YKL033W-AQ86ZR7 236 aa5.64□□□□□ -1.51
SCL1YGL011C SIR3P06701 978 aa5.63□□□□□ -1.51
SCL1YGL011C SST2P11972 698 aaKnown RBP5.63□□□□□ -1.51
SCL1YGL011C SEC15P22224 910 aa5.63□□□□□ -1.51
SCL1YGL011C PRP22P24384 1145 aaKnown RBP5.63□□□□□ -1.51
SCL1YGL011C PRE4P30657 266 aa5.63□□□□□ -1.51
SCL1YGL011C PHO11P35842 467 aa5.63□□□□□ -1.51
SCL1YGL011C SRP68P38687 599 aaKnown RBP5.63□□□□□ -1.51
SCL1YGL011C PHO12P38693 467 aa5.63□□□□□ -1.51
SCL1YGL011C PIG2P40187 538 aa5.63□□□□□ -1.51
SCL1YGL011C ENP2P48234 707 aaKnown RBP5.63□□□□□ -1.51
SCL1YGL011C RFX1P48743 811 aa5.63□□□□□ -1.51
SCL1YGL011C SPO1P53541 631 aa5.63□□□□□ -1.51
SCL1YGL011C PPN1Q04119 674 aa5.63□□□□□ -1.51
SCL1YGL011C YOR378WQ08902 515 aa5.63□□□□□ -1.51
SCL1YGL011C PUS9Q12069 462 aa5.63□□□□□ -1.51
SCL1YGL011C ZRT2Q12436 422 aa5.63□□□□□ -1.51
SCL1YGL011C YEL076C-AP0CX16 216 aa5.62□□□□□ -1.51
SCL1YGL011C YLR464WP0CX17 216 aa5.62□□□□□ -1.51
SCL1YGL011C MTC7P32633 139 aa5.62□□□□□ -1.51
SCL1YGL011C NIC96P34077 839 aa5.62□□□□□ -1.51
SCL1YGL011C COS111P38308 924 aa5.62□□□□□ -1.51
SCL1YGL011C YEL076CP39971 216 aa5.62□□□□□ -1.51
SCL1YGL011C PRM2P40534 656 aa5.62□□□□□ -1.51
SCL1YGL011C TEL2P53038 688 aa5.62□□□□□ -1.51
SCL1YGL011C FHN1P53279 174 aa5.62□□□□□ -1.51
SCL1YGL011C HOL1P53389 586 aa5.62□□□□□ -1.51
SCL1YGL011C MTD1Q02046 320 aaKnown RBP5.62□□□□□ -1.51
SCL1YGL011C MUK1Q02866 612 aa5.62□□□□□ -1.51
SCL1YGL011C MLH3Q12083 715 aa5.62□□□□□ -1.51
SCL1YGL011C CHS5Q12114 671 aaKnown RBP5.62□□□□□ -1.51
SCL1YGL011C TUP1P16649 713 aa5.61□□□□□ -1.51
SCL1YGL011C CHS7P38843 316 aa5.61□□□□□ -1.51
SCL1YGL011C DAS1P47005 663 aa5.61□□□□□ -1.51
SCL1YGL011C YFT2Q06676 274 aa5.61□□□□□ -1.51
SCL1YGL011C THR1P17423 357 aaKnown RBP5.6□□□□□ -1.51
SCL1YGL011C PRP28P23394 588 aa5.6□□□□□ -1.51
SCL1YGL011C CDS1P38221 457 aa5.6□□□□□ -1.51
SCL1YGL011C CRG1P38892 291 aaRIP-Chip data5.6□□□□□ -1.51not detected
SCL1YGL011C YIL092WP40497 633 aa5.6□□□□□ -1.51
SCL1YGL011C MET14Q02196 202 aa5.6□□□□□ -1.51
SCL1YGL011C URN1Q06525 465 aaKnown RBP5.6□□□□□ -1.51
SCL1YGL011C HMG2P12684 1045 aa5.59□□□□□ -1.51
SCL1YGL011C PCL5P38794 229 aa5.59□□□□□ -1.51
SCL1YGL011C FTR1P40088 404 aa5.59□□□□□ -1.51
SCL1YGL011C TPM2P40414 161 aa5.59□□□□□ -1.51
SCL1YGL011C MPS3P47069 682 aa5.59□□□□□ -1.51
SCL1YGL011C RTS3P53289 263 aa5.59□□□□□ -1.51
SCL1YGL011C RIA1P53893 1110 aa5.59□□□□□ -1.51
SCL1YGL011C TIM50Q02776 476 aa5.59□□□□□ -1.51
SCL1YGL011C NUR1Q12066 484 aa5.59□□□□□ -1.51
SCL1YGL011C RTK1Q12100 620 aaPredicted RBP5.59□□□□□ -1.51
SCL1YGL011C NYV1Q12255 253 aa5.59□□□□□ -1.51
SCL1YGL011C CLF1Q12309 687 aaPredicted RBP5.59□□□□□ -1.51
SCL1YGL011C ATP4P05626 244 aa5.58□□□□□ -1.52
SCL1YGL011C YEF3P16521 1044 aaKnown RBP5.58□□□□□ -1.52
SCL1YGL011C KCC4P25389 1037 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms