RNA–Protein interactions for RNA: YDR224C

HTB1, Transcript of Histone H2B, yeast

Gene HTB1, Length 396 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HTB1	YDR224C	PEX1	P24004	1043 aa		4.63	□□□□□ -1.67
HTB1	YDR224C	SFB3	P38810	929 aa		4.63	□□□□□ -1.67
HTB1	YDR224C	YNL195C	P40168	261 aa		4.63	□□□□□ -1.67
HTB1	YDR224C	GZF3	P42944	551 aa	Known RBP	4.63	□□□□□ -1.67
HTB1	YDR224C	NOP9	P47077	666 aa	Known RBP	4.63	□□□□□ -1.67
HTB1	YDR224C	YMR210W	Q03649	449 aa		4.63	□□□□□ -1.67
HTB1	YDR224C	HMO1	Q03973	246 aa	Known RBP	4.63	□□□□□ -1.67
HTB1	YDR224C	VHS3	Q08438	674 aa		4.63	□□□□□ -1.67
HTB1	YDR224C	ZRT2	Q12436	422 aa		4.63	□□□□□ -1.67
HTB1	YDR224C	ECM3	Q99252	613 aa		4.63	□□□□□ -1.67
HTB1	YDR224C	BEM4	P39011	633 aa		4.62	□□□□□ -1.67
HTB1	YDR224C	GET2	P40056	285 aa		4.62	□□□□□ -1.67
HTB1	YDR224C	CCT5	P40413	562 aa	Known RBP	4.62	□□□□□ -1.67
HTB1	YDR224C	RSC8	P43609	557 aa	Known RBP	4.62	□□□□□ -1.67
HTB1	YDR224C	PAN2	P53010	1115 aa	Predicted RBP	4.62	□□□□□ -1.67
HTB1	YDR224C	HOM2	P13663	365 aa	Known RBP	4.61	□□□□□ -1.67
HTB1	YDR224C	SEC15	P22224	910 aa		4.61	□□□□□ -1.67
HTB1	YDR224C	UBP12	P39538	1254 aa		4.61	□□□□□ -1.67
HTB1	YDR224C	GPP1	P41277	250 aa	Known RBP	4.61	□□□□□ -1.67
HTB1	YDR224C	GPG1	P53130	126 aa		4.61	□□□□□ -1.67
HTB1	YDR224C	YLR407W	Q06070	228 aa		4.61	□□□□□ -1.67
HTB1	YDR224C	ERG20	P08524	352 aa	Known RBP	4.6	□□□□□ -1.67
HTB1	YDR224C	IMG2	P25642	146 aa	Predicted RBP	4.6	□□□□□ -1.67
HTB1	YDR224C	PET127	P32606	800 aa		4.6	□□□□□ -1.67
HTB1	YDR224C	OAF1	P39720	1047 aa	Predicted RBP	4.6	□□□□□ -1.67
HTB1	YDR224C	MNN11	P46985	422 aa	Known RBP	4.6	□□□□□ -1.67
HTB1	YDR224C	ECM9	Q02202	377 aa		4.6	□□□□□ -1.67
HTB1	YDR224C	YHM2	Q04013	314 aa		4.6	□□□□□ -1.67
HTB1	YDR224C	CLF1	Q12309	687 aa	Predicted RBP	4.6	□□□□□ -1.67
HTB1	YDR224C	FRS1	P15624	595 aa	Known RBP	4.59	□□□□□ -1.67
HTB1	YDR224C	VPS34	P22543	875 aa		4.59	□□□□□ -1.67
HTB1	YDR224C	SEC65	P29478	273 aa		4.59	□□□□□ -1.67
HTB1	YDR224C	YKU70	P32807	602 aa		4.59	□□□□□ -1.67
HTB1	YDR224C	DID4	P36108	232 aa		4.59	□□□□□ -1.67
HTB1	YDR224C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
HTB1	YDR224C	PAC2	P39937	518 aa		4.59	□□□□□ -1.67
HTB1	YDR224C	YEN1	P40028	759 aa		4.59	□□□□□ -1.67
HTB1	YDR224C	PIG2	P40187	538 aa		4.59	□□□□□ -1.67
HTB1	YDR224C	ATG4	P53867	494 aa		4.59	□□□□□ -1.67
HTB1	YDR224C	VBA4	Q04602	768 aa	Known RBP	4.59	□□□□□ -1.67
HTB1	YDR224C	RGC1	Q06108	1083 aa	Known RBP	4.59	□□□□□ -1.67
HTB1	YDR224C	RPS21B	Q3E754	87 aa	Known RBP	4.59	□□□□□ -1.67
HTB1	YDR224C	SWI6	P09959	803 aa		4.58	□□□□□ -1.68
HTB1	YDR224C	PHO11	P35842	467 aa		4.58	□□□□□ -1.68
HTB1	YDR224C	BIT2	P38346	545 aa		4.58	□□□□□ -1.68
HTB1	YDR224C	PHO12	P38693	467 aa		4.58	□□□□□ -1.68
HTB1	YDR224C	HXT6	P39003	570 aa	Known RBP	4.58	□□□□□ -1.68
HTB1	YDR224C	HXT7	P39004	570 aa		4.58	□□□□□ -1.68
HTB1	YDR224C	PTA1	Q01329	785 aa	Predicted RBP	4.58	□□□□□ -1.68
HTB1	YDR224C	RIM13	Q03792	727 aa		4.58	□□□□□ -1.68
HTB1	YDR224C	THI22	Q06490	572 aa		4.58	□□□□□ -1.68
HTB1	YDR224C	VPS36	Q06696	566 aa		4.58	□□□□□ -1.68
HTB1	YDR224C	POM34	Q12445	299 aa		4.58	□□□□□ -1.68
HTB1	YDR224C	PRP28	P23394	588 aa		4.57	□□□□□ -1.68
HTB1	YDR224C	KIN82	P25341	720 aa		4.57	□□□□□ -1.68
HTB1	YDR224C	GRX4	P32642	244 aa		4.57	□□□□□ -1.68
HTB1	YDR224C	BCS1	P32839	456 aa		4.57	□□□□□ -1.68
HTB1	YDR224C	UBS1	P38290	277 aa		4.57	□□□□□ -1.68
HTB1	YDR224C	FHN1	P53279	174 aa		4.57	□□□□□ -1.68
HTB1	YDR224C	SEG1	Q04279	960 aa		4.57	□□□□□ -1.68
HTB1	YDR224C	HFI1	Q12060	488 aa		4.57	□□□□□ -1.68
HTB1	YDR224C	MLH3	Q12083	715 aa		4.57	□□□□□ -1.68
HTB1	YDR224C	RPS9B	P05755	195 aa	Known RBP	4.56	□□□□□ -1.68
HTB1	YDR224C	PRP22	P24384	1145 aa	Known RBP	4.56	□□□□□ -1.68
HTB1	YDR224C	TSR4	P25040	408 aa		4.56	□□□□□ -1.68
HTB1	YDR224C	DUN1	P39009	513 aa		4.56	□□□□□ -1.68
HTB1	YDR224C	BIT61	P47041	543 aa		4.56	□□□□□ -1.68
HTB1	YDR224C	NOP15	P53927	220 aa	Predicted RBP	4.56	□□□□□ -1.68
HTB1	YDR224C	YPS7	Q06325	596 aa		4.56	□□□□□ -1.68
HTB1	YDR224C	SLK19	Q08581	821 aa	Known RBP	4.56	□□□□□ -1.68
HTB1	YDR224C	CHS5	Q12114	671 aa	Known RBP	4.56	□□□□□ -1.68
HTB1	YDR224C	RPS17A	P02407	136 aa	Known RBP	4.55	□□□□□ -1.68
HTB1	YDR224C	RPS17B	P14127	136 aa	Known RBP	4.55	□□□□□ -1.68
HTB1	YDR224C	FEN2	P25621	512 aa	Known RBP	4.55	□□□□□ -1.68
HTB1	YDR224C	OAF3	P36023	863 aa		4.55	□□□□□ -1.68
HTB1	YDR224C	YIL077C	P40508	320 aa		4.55	□□□□□ -1.68
HTB1	YDR224C	PXA1	P41909	870 aa		4.55	□□□□□ -1.68
HTB1	YDR224C	GAT1	P43574	510 aa		4.55	□□□□□ -1.68
HTB1	YDR224C	MRK1	P50873	501 aa		4.55	□□□□□ -1.68
HTB1	YDR224C	RPS21A	P0C0V8	87 aa	Known RBP	4.54	□□□□□ -1.68
HTB1	YDR224C	GLN4	P13188	809 aa	Known RBP	4.54	□□□□□ -1.68
HTB1	YDR224C	ABF1	P14164	731 aa		4.54	□□□□□ -1.68
HTB1	YDR224C	THR1	P17423	357 aa	Known RBP	4.54	□□□□□ -1.68
HTB1	YDR224C	PTP1	P25044	335 aa		4.54	□□□□□ -1.68
HTB1	YDR224C	YPT7	P32939	208 aa		4.54	□□□□□ -1.68
HTB1	YDR224C	COS111	P38308	924 aa		4.54	□□□□□ -1.68
HTB1	YDR224C	RCR2	Q03446	210 aa	Known RBP	4.54	□□□□□ -1.68
HTB1	YDR224C	PPN1	Q04119	674 aa		4.54	□□□□□ -1.68
HTB1	YDR224C	USV1	Q12132	391 aa		4.54	□□□□□ -1.68
HTB1	YDR224C	SEC6	P32844	805 aa		4.53	□□□□□ -1.68
HTB1	YDR224C	FAT1	P38225	669 aa		4.53	□□□□□ -1.68
HTB1	YDR224C	MUP3	P38734	546 aa		4.53	□□□□□ -1.68
HTB1	YDR224C	DUG1	P43616	481 aa	Known RBP	4.53	□□□□□ -1.68
HTB1	YDR224C	RFX1	P48743	811 aa		4.53	□□□□□ -1.68
HTB1	YDR224C	YFT2	Q06676	274 aa		4.53	□□□□□ -1.68
HTB1	YDR224C	STP4	Q07351	490 aa		4.53	□□□□□ -1.68
HTB1	YDR224C	OSW1	Q08692	278 aa		4.53	□□□□□ -1.68
HTB1	YDR224C	RMP1	Q12530	201 aa		4.53	□□□□□ -1.68
HTB1	YDR224C	APM4	Q99186	491 aa		4.53	□□□□□ -1.68
HTB1	YDR224C	IME1	P21190	360 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms