RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C ISR1Q06098 443 aaKnown RBP5.51□□□□□ -1.53
ATG20YDL113C TY1A-BRQ12217 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-NL2Q12470 440 aa5.51□□□□□ -1.53
ATG20YDL113C TY1A-GR2Q12485 440 aa5.51□□□□□ -1.53
ATG20YDL113C ADE4P04046 510 aaKnown RBP5.5□□□□□ -1.53
ATG20YDL113C POX1P13711 748 aa5.5□□□□□ -1.53
ATG20YDL113C PRE10P21242 288 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
ATG20YDL113C SEC21P32074 935 aaKnown RBP5.5□□□□□ -1.53
ATG20YDL113C PEX2P32800 271 aa5.5□□□□□ -1.53
ATG20YDL113C NFU1P32860 256 aa5.5□□□□□ -1.53
ATG20YDL113C TDA3P38758 523 aa5.5□□□□□ -1.53
ATG20YDL113C DYS1P38791 387 aa5.5□□□□□ -1.53
ATG20YDL113C FTR1P40088 404 aa5.5□□□□□ -1.53
ATG20YDL113C ASG1P40467 964 aa5.5□□□□□ -1.53
ATG20YDL113C MKT1P40850 830 aaKnown RBP5.5□□□□□ -1.53
ATG20YDL113C PHO86P46956 311 aa5.5□□□□□ -1.53
ATG20YDL113C ZAP1P47043 880 aa5.5□□□□□ -1.53
ATG20YDL113C ISM1P48526 1002 aa5.5□□□□□ -1.53
ATG20YDL113C TDA9Q04545 1251 aa5.5□□□□□ -1.53
ATG20YDL113C OMS1Q06668 471 aa5.5□□□□□ -1.53
ATG20YDL113C ALR1Q08269 859 aa5.5□□□□□ -1.53
ATG20YDL113C TY3A-GQ12173 290 aa5.5□□□□□ -1.53
ATG20YDL113C ATG11Q12527 1178 aa5.5□□□□□ -1.53
ATG20YDL113C TY3A-IQ99219 290 aa5.5□□□□□ -1.53
ATG20YDL113C AI5_BETAQ9ZZX0 354 aa5.5□□□□□ -1.53
ATG20YDL113C ASP3-2P0CX77 362 aa5.5□□□□□ -1.53
ATG20YDL113C ASP3-3P0CX78 362 aa5.5□□□□□ -1.53
ATG20YDL113C ASP3-4P0CX79 362 aa5.5□□□□□ -1.53
ATG20YDL113C ASP3-1P0CZ17 362 aa5.5□□□□□ -1.53
ATG20YDL113C RAM1P22007 431 aa5.5□□□□□ -1.53
ATG20YDL113C DPH2P32461 534 aa5.5□□□□□ -1.53
ATG20YDL113C ISC10P32645 267 aa5.5□□□□□ -1.53
ATG20YDL113C YBL055CP34220 418 aaPredicted RBP5.5□□□□□ -1.53
ATG20YDL113C ECM2P38241 364 aaKnown RBP5.5□□□□□ -1.53
ATG20YDL113C MMS4P38257 691 aa5.5□□□□□ -1.53
ATG20YDL113C SPP381P38282 291 aaPredicted RBP5.5□□□□□ -1.53
ATG20YDL113C TIF5P38431 405 aaKnown RBP5.5□□□□□ -1.53
ATG20YDL113C END3P39013 349 aa5.5□□□□□ -1.53
ATG20YDL113C CCT2P39076 527 aaKnown RBP5.5□□□□□ -1.53
ATG20YDL113C SHE10P53075 577 aa5.5□□□□□ -1.53
ATG20YDL113C BRE5P53741 515 aaKnown RBP5.5□□□□□ -1.53
ATG20YDL113C NOG2P53742 486 aaKnown RBP5.5□□□□□ -1.53
ATG20YDL113C GPD1Q00055 391 aaKnown RBP5.5□□□□□ -1.53
ATG20YDL113C YLR455WQ06188 304 aa5.5□□□□□ -1.53
ATG20YDL113C HIF1Q12373 385 aa5.5□□□□□ -1.53
ATG20YDL113C COX4P04037 155 aa5.49□□□□□ -1.53
ATG20YDL113C WHI2P12611 486 aa5.49□□□□□ -1.53
ATG20YDL113C NAT1P12945 854 aaKnown RBP5.49□□□□□ -1.53
ATG20YDL113C MSH1P25846 959 aa5.49□□□□□ -1.53
ATG20YDL113C CAP1P28495 268 aaKnown RBP5.49□□□□□ -1.53
ATG20YDL113C TIM23P32897 222 aa5.49□□□□□ -1.53
ATG20YDL113C UBC6P33296 250 aaPredicted RBP5.49□□□□□ -1.53
ATG20YDL113C SPC72P39723 622 aa5.49□□□□□ -1.53
ATG20YDL113C ULI1P43604 169 aa5.49□□□□□ -1.53
ATG20YDL113C ASG7P46993 209 aa5.49□□□□□ -1.53
ATG20YDL113C YJR079WP47126 109 aa5.49□□□□□ -1.53
ATG20YDL113C UTP6Q02354 440 aaKnown RBP5.49□□□□□ -1.53
ATG20YDL113C YMR187CQ03236 431 aa5.49□□□□□ -1.53
ATG20YDL113C STE23Q06010 1027 aa5.49□□□□□ -1.53
ATG20YDL113C MET7Q08645 548 aa5.49□□□□□ -1.53
ATG20YDL113C BI2P03873 423 aa5.48□□□□□ -1.53
ATG20YDL113C BI4P03879 638 aa5.48□□□□□ -1.53
ATG20YDL113C PUF4P25339 888 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
ATG20YDL113C MSG5P38590 489 aa5.48□□□□□ -1.53
ATG20YDL113C QNS1P38795 714 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C FAA3P39002 694 aa5.48□□□□□ -1.53
ATG20YDL113C TMN3P40071 706 aa5.48□□□□□ -1.53
ATG20YDL113C INP51P40559 946 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C SKP2P42843 763 aa5.48□□□□□ -1.53
ATG20YDL113C YGL140CP53120 1219 aa5.48□□□□□ -1.53
ATG20YDL113C CWC24P53769 259 aa5.48□□□□□ -1.53
ATG20YDL113C NMA111P53920 997 aa5.48□□□□□ -1.53
ATG20YDL113C CDC55Q00362 526 aa5.48□□□□□ -1.53
ATG20YDL113C CWC21Q03375 135 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C MSC2Q03455 724 aa5.48□□□□□ -1.53
ATG20YDL113C ATG16Q03818 150 aa5.48□□□□□ -1.53
ATG20YDL113C UFO1Q04511 668 aa5.48□□□□□ -1.53
ATG20YDL113C ECM7Q06200 448 aa5.48□□□□□ -1.53
ATG20YDL113C CDD1Q06549 142 aa5.48□□□□□ -1.53
ATG20YDL113C GIS3Q12418 502 aa5.48□□□□□ -1.53
ATG20YDL113C BI3Q9ZZW7 517 aa5.48□□□□□ -1.53
ATG20YDL113C GAL10P04397 699 aa5.48□□□□□ -1.53
ATG20YDL113C CYT1P07143 309 aa5.48□□□□□ -1.53
ATG20YDL113C COX11P19516 300 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C DEP1P31385 405 aa5.48□□□□□ -1.53
ATG20YDL113C EFB1P32471 206 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C SKG6P32900 734 aaPredicted RBP5.48□□□□□ -1.53
ATG20YDL113C SEG2P34250 1132 aa5.48□□□□□ -1.53
ATG20YDL113C MOT2P34909 587 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C YHR020WP38708 688 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C PAC1P39946 494 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C FAA4P47912 694 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C STB4P50104 949 aa5.48□□□□□ -1.53
ATG20YDL113C CPR6P53691 371 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C SNU56Q03782 492 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C YLR225CQ05948 407 aaKnown RBP5.48□□□□□ -1.53
ATG20YDL113C SDH5Q08230 162 aa5.48□□□□□ -1.53
ATG20YDL113C BDS1Q08347 646 aa5.48□□□□□ -1.53
ATG20YDL113C EMP46Q12396 444 aa5.48□□□□□ -1.53
ATG20YDL113C VAC17P25591 423 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms