RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C COG6P53959 839 aa2.21□□□□□ -2.06
BRE1YDL074C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
BRE1YDL074C SLD5Q03406 294 aa2.21□□□□□ -2.06
BRE1YDL074C CEF1Q03654 590 aaPredicted RBP2.21□□□□□ -2.06
BRE1YDL074C GYL1Q04322 720 aa2.21□□□□□ -2.06
BRE1YDL074C TDA9Q04545 1251 aa2.21□□□□□ -2.06
BRE1YDL074C YOL087CQ99247 1116 aa2.21□□□□□ -2.06
BRE1YDL074C AI5_BETAQ9ZZX0 354 aa2.21□□□□□ -2.06
BRE1YDL074C YML002WP0CF17 737 aa2.21□□□□□ -2.06
BRE1YDL074C WHI2P12611 486 aa2.21□□□□□ -2.06
BRE1YDL074C YPK1P12688 680 aaKnown RBP2.21□□□□□ -2.06
BRE1YDL074C YDJ1P25491 409 aaKnown RBP2.21□□□□□ -2.06
BRE1YDL074C EFB1P32471 206 aaKnown RBP2.21□□□□□ -2.06
BRE1YDL074C CBF2P32504 956 aa2.21□□□□□ -2.06
BRE1YDL074C TOA1P32773 286 aa2.21□□□□□ -2.06
BRE1YDL074C RAD5P32849 1169 aaPredicted RBP2.21□□□□□ -2.06
BRE1YDL074C PEX5P35056 612 aa2.21□□□□□ -2.06
BRE1YDL074C NCL1P38205 684 aaKnown RBP2.21□□□□□ -2.06
BRE1YDL074C SHE3P38272 425 aaKnown RBP2.21□□□□□ -2.06
BRE1YDL074C APM2P38700 605 aa2.21□□□□□ -2.06
BRE1YDL074C YHR054CP38780 354 aa2.21□□□□□ -2.06
BRE1YDL074C ARG2P40360 574 aa2.21□□□□□ -2.06
BRE1YDL074C RLP7P40693 322 aaKnown RBP2.21□□□□□ -2.06
BRE1YDL074C PHO86P46956 311 aa2.21□□□□□ -2.06
BRE1YDL074C YJR054WP47114 497 aa2.21□□□□□ -2.06
BRE1YDL074C VPS70P47161 811 aa2.21□□□□□ -2.06
BRE1YDL074C BRO1P48582 844 aa2.21□□□□□ -2.06
BRE1YDL074C ATG1P53104 897 aa2.21□□□□□ -2.06
BRE1YDL074C YMR027WQ04371 470 aa2.21□□□□□ -2.06
BRE1YDL074C SPC24Q04477 213 aa2.21□□□□□ -2.06
BRE1YDL074C PRM6Q04705 352 aa2.21□□□□□ -2.06
BRE1YDL074C THI7Q05998 598 aa2.21□□□□□ -2.06
BRE1YDL074C FMP25Q08023 583 aa2.21□□□□□ -2.06
BRE1YDL074C YOR223WQ12015 292 aa2.21□□□□□ -2.06
BRE1YDL074C SLX4Q12098 748 aa2.21□□□□□ -2.06
BRE1YDL074C NCA2Q12374 616 aa2.21□□□□□ -2.06
BRE1YDL074C LAA1P39526 2014 aa2.21□□□□□ -2.06
BRE1YDL074C GAL10P04397 699 aa2.2□□□□□ -2.06
BRE1YDL074C GCR1P07261 785 aa2.2□□□□□ -2.06
BRE1YDL074C PUT4P15380 627 aa2.2□□□□□ -2.06
BRE1YDL074C SRV2P17555 526 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C PRP9P19736 530 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C DAL2P25335 343 aa2.2□□□□□ -2.06
BRE1YDL074C PAT1P25644 796 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C SEC1P30619 724 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C NIP1P32497 812 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C RRN6P32786 894 aa2.2□□□□□ -2.06
BRE1YDL074C SMY2P32909 740 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C IXR1P33417 597 aa2.2□□□□□ -2.06
BRE1YDL074C SET3P36124 751 aa2.2□□□□□ -2.06
BRE1YDL074C VID24P38263 362 aa2.2□□□□□ -2.06
BRE1YDL074C SWC5P38326 303 aa2.2□□□□□ -2.06
BRE1YDL074C MSG5P38590 489 aa2.2□□□□□ -2.06
BRE1YDL074C SAH1P39954 449 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C TMA108P40462 946 aa2.2□□□□□ -2.06
BRE1YDL074C YNL320WP42840 284 aa2.2□□□□□ -2.06
BRE1YDL074C AVT1P47082 602 aa2.2□□□□□ -2.06
BRE1YDL074C URB2P47108 1174 aa2.2□□□□□ -2.06
BRE1YDL074C ILM1P47155 203 aa2.2□□□□□ -2.06
BRE1YDL074C MND1P53102 219 aa2.2□□□□□ -2.06
BRE1YDL074C RIM8P53179 542 aa2.2□□□□□ -2.06
BRE1YDL074C LSC1P53598 329 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C YNL058CP53947 316 aa2.2□□□□□ -2.06
BRE1YDL074C YDR090CQ03193 310 aa2.2□□□□□ -2.06
BRE1YDL074C CWC21Q03375 135 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C TRS130Q03660 1102 aa2.2□□□□□ -2.06
BRE1YDL074C PPM1Q04081 328 aa2.2□□□□□ -2.06
BRE1YDL074C YDR222WQ04925 415 aa2.2□□□□□ -2.06
BRE1YDL074C SHS1Q07657 551 aa2.2□□□□□ -2.06
BRE1YDL074C ABP140Q08641 628 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C TFB4Q12004 338 aa2.2□□□□□ -2.06
BRE1YDL074C FAP7Q12055 197 aaPredicted RBP2.2□□□□□ -2.06
BRE1YDL074C HOS1Q12214 470 aa2.2□□□□□ -2.06
BRE1YDL074C TY4A-HQ6Q5P6 413 aa2.2□□□□□ -2.06
BRE1YDL074C VPS5Q92331 675 aa2.2□□□□□ -2.06
BRE1YDL074C ECM3Q99252 613 aa2.2□□□□□ -2.06
BRE1YDL074C ARG4P04076 463 aaPredicted RBP2.2□□□□□ -2.06
BRE1YDL074C SPT2P06843 333 aaPredicted RBP2.2□□□□□ -2.06
BRE1YDL074C ASP3-2P0CX77 362 aa2.2□□□□□ -2.06
BRE1YDL074C ASP3-3P0CX78 362 aa2.2□□□□□ -2.06
BRE1YDL074C ASP3-4P0CX79 362 aa2.2□□□□□ -2.06
BRE1YDL074C ASP3-1P0CZ17 362 aa2.2□□□□□ -2.06
BRE1YDL074C AEP2P22136 580 aa2.2□□□□□ -2.06
BRE1YDL074C KIN82P25341 720 aa2.2□□□□□ -2.06
BRE1YDL074C HEM3P28789 327 aa2.2□□□□□ -2.06
BRE1YDL074C MSS51P32335 436 aa2.2□□□□□ -2.06
BRE1YDL074C TMT1P32643 299 aa2.2□□□□□ -2.06
BRE1YDL074C SHP1P34223 423 aa2.2□□□□□ -2.06
BRE1YDL074C HEK2P38199 381 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
BRE1YDL074C FZO1P38297 855 aa2.2□□□□□ -2.06
BRE1YDL074C LYS9P38999 446 aa2.2□□□□□ -2.06
BRE1YDL074C SAP1P39955 897 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C RIO2P40160 425 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C SMX2P40204 77 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C YIL089WP40500 205 aa2.2□□□□□ -2.06
BRE1YDL074C SNZ3P43545 298 aa2.2□□□□□ -2.06
BRE1YDL074C MNN11P46985 422 aaKnown RBP2.2□□□□□ -2.06
BRE1YDL074C ACF4P47129 309 aa2.2□□□□□ -2.06
BRE1YDL074C ORC5P50874 479 aa2.2□□□□□ -2.06
BRE1YDL074C ALT2P52892 507 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms