RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	MUP3	P38734	546 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	REV7	P38927	245 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	SAK1	P38990	1142 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	SIT1	P39980	628 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	COG8	Q04632	607 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	HAL9	Q12180	1030 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	NFI1	Q12216	726 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	RPS9A	O13516	197 aa	Known RBP	2.13	□□□□□ -2.07
LRE1	YCL051W	PET111	P08468	800 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	AAR2	P32357	355 aa	Predicted RBP	2.13	□□□□□ -2.07
LRE1	YCL051W	PIM1	P36775	1133 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	CCM1	P48237	864 aa	Predicted RBP	2.13	□□□□□ -2.07
LRE1	YCL051W	VID30	P53076	958 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	CWC24	P53769	259 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	ERV41	Q04651	352 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.13	□□□□□ -2.07	not detected
LRE1	YCL051W	YKL033W-A	Q86ZR7	236 aa		2.13	□□□□□ -2.07
LRE1	YCL051W	APN1	P22936	367 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	SPC29	P33419	253 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	MRP8	P35719	219 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	PBY1	P38254	753 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	TPM2	P40414	161 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	MAD1	P40957	749 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	CEF1	Q03654	590 aa	Predicted RBP	2.12	□□□□□ -2.07
LRE1	YCL051W	RCF1	Q03713	159 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	GGA1	Q06336	557 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	IMH1	Q06704	911 aa	Known RBP	2.12	□□□□□ -2.07
LRE1	YCL051W	OPI10	Q08202	246 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	PIN2	Q12057	282 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	CFT2	Q12102	859 aa	Predicted RBP	2.12	□□□□□ -2.07
LRE1	YCL051W	VPS5	Q92331	675 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	NOP14	Q99207	810 aa	Known RBP	2.12	□□□□□ -2.07
LRE1	YCL051W	TY4B-H	P0C2J7	1802 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	TY4B-J	P47024	1803 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	FKS3	Q04952	1785 aa		2.12	□□□□□ -2.07
LRE1	YCL051W	PCT1	P13259	424 aa		2.11	□□□□□ -2.07
LRE1	YCL051W	HSC82	P15108	705 aa	Known RBP	2.11	□□□□□ -2.07
LRE1	YCL051W	SWI3	P32591	825 aa		2.11	□□□□□ -2.07
LRE1	YCL051W	SWH1	P35845	1188 aa		2.11	□□□□□ -2.07
LRE1	YCL051W	YMR124W	P39523	943 aa	Known RBP	2.11	□□□□□ -2.07
LRE1	YCL051W	YIR014W	P40570	242 aa		2.11	□□□□□ -2.07
LRE1	YCL051W	SSY5	P47002	699 aa		2.11	□□□□□ -2.07
LRE1	YCL051W	PAN2	P53010	1115 aa	Predicted RBP	2.11	□□□□□ -2.07
LRE1	YCL051W	VPS72	Q03388	795 aa		2.11	□□□□□ -2.07
LRE1	YCL051W	VPS60	Q03390	229 aa		2.11	□□□□□ -2.07
LRE1	YCL051W	PSR1	Q07800	427 aa		2.11	□□□□□ -2.07
LRE1	YCL051W	MLH3	Q12083	715 aa		2.11	□□□□□ -2.07
LRE1	YCL051W	GPR1	Q12361	961 aa		2.11	□□□□□ -2.07
LRE1	YCL051W	ENT1	Q12518	454 aa		2.11	□□□□□ -2.07
LRE1	YCL051W	URB1	P34241	1764 aa	Known RBP	2.11	□□□□□ -2.07
LRE1	YCL051W	TY3B-I	Q7LHG5	1498 aa	Known RBP	2.1	□□□□□ -2.07
LRE1	YCL051W	MSP1	P28737	362 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	ZUO1	P32527	433 aa	Known RBP	2.1	□□□□□ -2.07
LRE1	YCL051W	CCT3	P39077	534 aa	Known RBP	2.1	□□□□□ -2.07
LRE1	YCL051W	CIN4	P39110	191 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	CHZ1	P40019	153 aa	Predicted RBP	2.1	□□□□□ -2.07
LRE1	YCL051W	TOK1	P40310	691 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.1	□□□□□ -2.07	not detected
LRE1	YCL051W	YNR029C	P53729	429 aa	Known RBP	2.1	□□□□□ -2.07
LRE1	YCL051W	TEX1	P53851	422 aa	Known RBP	2.1	□□□□□ -2.07
LRE1	YCL051W	ATG4	P53867	494 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	ORM2	Q06144	216 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	NDL1	Q06568	189 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	RIX7	Q07844	837 aa	Known RBP	2.1	□□□□□ -2.07
LRE1	YCL051W	YOR389W	Q08912	624 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	MBR1	P23493	339 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	PSO2	P30620	661 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	NUF2	P33895	451 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	SFB3	P38810	929 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	IRR1	P40541	1150 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	FHN1	P53279	174 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	STP1	Q00947	519 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	LCD1	Q04377	747 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	SVF1	Q05515	481 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	ARR1	Q06596	294 aa		2.1	□□□□□ -2.07
LRE1	YCL051W	CLF1	Q12309	687 aa	Predicted RBP	2.1	□□□□□ -2.07
LRE1	YCL051W	EDE1	P34216	1381 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	RAD3	P06839	778 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	KAR3	P17119	729 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	PRP9	P19736	530 aa	Known RBP	2.09	□□□□□ -2.07
LRE1	YCL051W	CLN1	P20437	546 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	PRI2	P20457	528 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	RPL5	P26321	297 aa	Known RBP	2.09	□□□□□ -2.07
LRE1	YCL051W	CCR4	P31384	837 aa	Known RBP	2.09	□□□□□ -2.07
LRE1	YCL051W	REC104	P33323	182 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	YKL069W	P36088	180 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	VPS24	P36095	224 aa	Known RBP	2.09	□□□□□ -2.07
LRE1	YCL051W	GDT1	P38301	280 aa	Predicted RBP	2.09	□□□□□ -2.07
LRE1	YCL051W	BEM4	P39011	633 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	HUL5	P53119	910 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	NOP7	P53261	605 aa	Known RBP	2.09	□□□□□ -2.07
LRE1	YCL051W	PXR1	P53335	271 aa	Predicted RBP	2.09	□□□□□ -2.07
LRE1	YCL051W	DNM1	P54861	757 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	TIM11	P81449	96 aa	Predicted RBP	2.09	□□□□□ -2.07
LRE1	YCL051W	FMP30	Q02883	468 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	YMR102C	Q03177	834 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	RRB1	Q04225	511 aa	Known RBP	2.09	□□□□□ -2.07
LRE1	YCL051W	YDR341C	Q05506	607 aa	Known RBP	2.09	□□□□□ -2.07
LRE1	YCL051W	GLE1	Q12315	538 aa		2.09	□□□□□ -2.07
LRE1	YCL051W	IKI3	Q06706	1349 aa	Known RBP	2.09	□□□□□ -2.08

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms