RNA–Protein interactions for RNA: YBR130C

SHE3, Transcript of Protein adaptor between Myo4p and the She2p-mRNA complex, yeast

Gene SHE3, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE3	YBR130C	STE14	P32584	239 aa		5	□□□□□ -1.61
SHE3	YBR130C	YEL076C	P39971	216 aa		5	□□□□□ -1.61
SHE3	YBR130C	GID8	P40208	455 aa		5	□□□□□ -1.61
SHE3	YBR130C	PXA1	P41909	870 aa		5	□□□□□ -1.61
SHE3	YBR130C	IRC5	P43610	853 aa		5	□□□□□ -1.61
SHE3	YBR130C	CHA4	P43634	648 aa		5	□□□□□ -1.61
SHE3	YBR130C	GCV2	P49095	1034 aa		5	□□□□□ -1.61
SHE3	YBR130C	NCS6	P53088	359 aa		5	□□□□□ -1.61
SHE3	YBR130C	COX18	P53239	316 aa		5	□□□□□ -1.61
SHE3	YBR130C	ARG5,6	Q01217	863 aa		5	□□□□□ -1.61
SHE3	YBR130C	YML131W	Q03102	365 aa		5	□□□□□ -1.61
SHE3	YBR130C	NRG1	Q03125	231 aa		5	□□□□□ -1.61
SHE3	YBR130C	YMR018W	Q04364	514 aa		5	□□□□□ -1.61
SHE3	YBR130C	HLR1	Q04429	423 aa		5	□□□□□ -1.61
SHE3	YBR130C	GAD1	Q04792	585 aa		5	□□□□□ -1.61
SHE3	YBR130C	COG4	Q06096	861 aa		5	□□□□□ -1.61
SHE3	YBR130C	DIA2	Q08496	732 aa	Predicted RBP	5	□□□□□ -1.61
SHE3	YBR130C	TRM11	Q12463	433 aa		5	□□□□□ -1.61
SHE3	YBR130C	VPS5	Q92331	675 aa		5	□□□□□ -1.61
SHE3	YBR130C	VAS1	P07806	1104 aa	Known RBP	4.99	□□□□□ -1.61
SHE3	YBR130C	CDC26	P14724	124 aa		4.99	□□□□□ -1.61
SHE3	YBR130C	FRS1	P15624	595 aa	Known RBP	4.99	□□□□□ -1.61
SHE3	YBR130C	SEC18	P18759	758 aa	Known RBP	4.99	□□□□□ -1.61
SHE3	YBR130C	RPN12	P32496	274 aa		4.99	□□□□□ -1.61
SHE3	YBR130C	EXO84	P38261	753 aa		4.99	□□□□□ -1.61
SHE3	YBR130C	RAD26	P40352	1085 aa		4.99	□□□□□ -1.61
SHE3	YBR130C	PUS4	P48567	403 aa	Known RBP	4.99	□□□□□ -1.61
SHE3	YBR130C	TAF4	P50105	388 aa		4.99	□□□□□ -1.61
SHE3	YBR130C	SQS1	P53866	767 aa	Known RBP	4.99	□□□□□ -1.61
SHE3	YBR130C	CEG1	Q01159	459 aa	Predicted RBP	4.99	□□□□□ -1.61
SHE3	YBR130C	LEE1	Q02799	301 aa	Known RBP	4.99	□□□□□ -1.61
SHE3	YBR130C	OPY2	Q06810	360 aa		4.99	□□□□□ -1.61
SHE3	YBR130C	BRE1	Q07457	700 aa	Known RBP	4.99	□□□□□ -1.61
SHE3	YBR130C	NPC2	Q12408	173 aa		4.99	□□□□□ -1.61
SHE3	YBR130C	APA1	P16550	321 aa	Known RBP	4.98	□□□□□ -1.61
SHE3	YBR130C	ADE2	P21264	571 aa	Known RBP	4.98	□□□□□ -1.61
SHE3	YBR130C	CDC20	P26309	610 aa		4.98	□□□□□ -1.61
SHE3	YBR130C	SEC21	P32074	935 aa	Known RBP	4.98	□□□□□ -1.61
SHE3	YBR130C	APM3	P38153	483 aa		4.98	□□□□□ -1.61
SHE3	YBR130C	YHR033W	P38690	423 aa		4.98	□□□□□ -1.61
SHE3	YBR130C	NOC2	P39744	710 aa	Known RBP	4.98	□□□□□ -1.61
SHE3	YBR130C	EAF5	P39995	279 aa		4.98	□□□□□ -1.61
SHE3	YBR130C	YAP6	Q03935	383 aa		4.98	□□□□□ -1.61
SHE3	YBR130C	TRI1	Q05024	226 aa		4.98	□□□□□ -1.61
SHE3	YBR130C	ASM4	Q05166	528 aa		4.98	□□□□□ -1.61
SHE3	YBR130C	HOS1	Q12214	470 aa		4.98	□□□□□ -1.61
SHE3	YBR130C	GPR1	Q12361	961 aa		4.98	□□□□□ -1.61
SHE3	YBR130C	TUB3	P09734	445 aa	Known RBP	4.97	□□□□□ -1.61
SHE3	YBR130C	KIN82	P25341	720 aa		4.97	□□□□□ -1.61
SHE3	YBR130C	XRS2	P33301	854 aa		4.97	□□□□□ -1.61
SHE3	YBR130C	TOD6	P34219	525 aa		4.97	□□□□□ -1.61
SHE3	YBR130C	MRPL36	P36531	177 aa		4.97	□□□□□ -1.61
SHE3	YBR130C	PSY4	P38193	441 aa		4.97	□□□□□ -1.61
SHE3	YBR130C	RPP1	P38786	293 aa		4.97	□□□□□ -1.61
SHE3	YBR130C	MSS4	P38994	779 aa		4.97	□□□□□ -1.61
SHE3	YBR130C	SCS2	P40075	244 aa	Known RBP	4.97	□□□□□ -1.61
SHE3	YBR130C	MDR1	P53258	950 aa		4.97	□□□□□ -1.61
SHE3	YBR130C	CTK1	Q03957	528 aa	Known RBP	4.97	□□□□□ -1.61
SHE3	YBR130C	YPS7	Q06325	596 aa		4.97	□□□□□ -1.61
SHE3	YBR130C	STP4	Q07351	490 aa		4.97	□□□□□ -1.61
SHE3	YBR130C	NEW1	Q08972	1196 aa	Known RBP	4.97	□□□□□ -1.61
SHE3	YBR130C	TUF1	P02992	437 aa	Known RBP	4.96	□□□□□ -1.62
SHE3	YBR130C	RPS9B	P05755	195 aa	Known RBP	4.96	□□□□□ -1.62
SHE3	YBR130C	CBP3	P21560	335 aa		4.96	□□□□□ -1.62
SHE3	YBR130C	CAD1	P24813	409 aa	Known RBP	4.96	□□□□□ -1.62
SHE3	YBR130C	RER1	P25560	188 aa		4.96	□□□□□ -1.62
SHE3	YBR130C	YLF2	P38746	405 aa		4.96	□□□□□ -1.62
SHE3	YBR130C	SPO1	P53541	631 aa		4.96	□□□□□ -1.62
SHE3	YBR130C	SVL3	Q03088	825 aa	Known RBP	4.96	□□□□□ -1.62
SHE3	YBR130C	GSF2	Q04697	403 aa	Known RBP	4.96	□□□□□ -1.62
SHE3	YBR130C	YLR224W	Q05947	369 aa		4.96	□□□□□ -1.62
SHE3	YBR130C	MCH5	Q08777	521 aa		4.96	□□□□□ -1.62
SHE3	YBR130C	ATG11	Q12527	1178 aa		4.96	□□□□□ -1.62
SHE3	YBR130C	YLR358C	O13565	187 aa		4.95	□□□□□ -1.62
SHE3	YBR130C	PHO5	P00635	467 aa		4.95	□□□□□ -1.62
SHE3	YBR130C	MIS1	P09440	975 aa	Known RBP	4.95	□□□□□ -1.62
SHE3	YBR130C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
SHE3	YBR130C	RNR1	P21524	888 aa	Known RBP	4.95	□□□□□ -1.62
SHE3	YBR130C	CWH43	P25618	953 aa		4.95	□□□□□ -1.62
SHE3	YBR130C	RPT3	P33298	428 aa	Known RBP	4.95	□□□□□ -1.62
SHE3	YBR130C	MFT1	P33441	392 aa	Known RBP	4.95	□□□□□ -1.62
SHE3	YBR130C	SWD1	P39706	426 aa		4.95	□□□□□ -1.62
SHE3	YBR130C	KAP123	P40069	1113 aa	Known RBP	4.95	□□□□□ -1.62
SHE3	YBR130C	SMK1	P41808	388 aa		4.95	□□□□□ -1.62
SHE3	YBR130C	PEF1	P53238	335 aa		4.95	□□□□□ -1.62
SHE3	YBR130C	GTR1	Q00582	310 aa		4.95	□□□□□ -1.62
SHE3	YBR130C	SSP2	Q08646	371 aa		4.95	□□□□□ -1.62
SHE3	YBR130C	AIM41	Q12032	185 aa		4.95	□□□□□ -1.62
SHE3	YBR130C	CHS3	P29465	1165 aa		4.94	□□□□□ -1.62
SHE3	YBR130C	CTF13	P35203	478 aa		4.94	□□□□□ -1.62
SHE3	YBR130C	SHM2	P37291	469 aa	Known RBP	4.94	□□□□□ -1.62
SHE3	YBR130C	YHR112C	P38716	378 aa		4.94	□□□□□ -1.62
SHE3	YBR130C	TMA108	P40462	946 aa		4.94	□□□□□ -1.62
SHE3	YBR130C	BUD8	P41698	603 aa		4.94	□□□□□ -1.62
SHE3	YBR130C	BIT61	P47041	543 aa		4.94	□□□□□ -1.62
SHE3	YBR130C	MAD3	P47074	515 aa		4.94	□□□□□ -1.62
SHE3	YBR130C	MRPL13	Q02204	264 aa		4.94	□□□□□ -1.62
SHE3	YBR130C	HMO1	Q03973	246 aa	Known RBP	4.94	□□□□□ -1.62
SHE3	YBR130C	POM34	Q12445	299 aa		4.94	□□□□□ -1.62
SHE3	YBR130C	NUC1	P08466	329 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms