RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C THI22Q06490 572 aa5.65□□□□□ -1.5
YPK3YBR028C OMS1Q06668 471 aa5.65□□□□□ -1.5
YPK3YBR028C YLR040CQ07988 224 aa5.65□□□□□ -1.5
YPK3YBR028C NUP60P39705 539 aa5.64□□□□□ -1.51
YPK3YBR028C VBA4Q04602 768 aaKnown RBP5.64□□□□□ -1.51
YPK3YBR028C IRC13Q08630 104 aa5.64□□□□□ -1.51
YPK3YBR028C CWC2Q12046 339 aaPredicted RBP5.64□□□□□ -1.51
YPK3YBR028C SRP68P38687 599 aaKnown RBP5.63□□□□□ -1.51
YPK3YBR028C BCD1P38772 366 aa5.63□□□□□ -1.51
YPK3YBR028C CCT3P39077 534 aaKnown RBP5.63□□□□□ -1.51
YPK3YBR028C PXA1P41909 870 aa5.63□□□□□ -1.51
YPK3YBR028C YJL163CP46996 555 aa5.63□□□□□ -1.51
YPK3YBR028C TAF4P50105 388 aa5.63□□□□□ -1.51
YPK3YBR028C FRE5Q08908 694 aa5.63□□□□□ -1.51
YPK3YBR028C POM34Q12445 299 aa5.63□□□□□ -1.51
YPK3YBR028C GAL1P04385 528 aa5.63□□□□□ -1.51
YPK3YBR028C KCC4P25389 1037 aa5.63□□□□□ -1.51
YPK3YBR028C DGR2P32330 852 aa5.63□□□□□ -1.51
YPK3YBR028C KTR4P38131 464 aa5.63□□□□□ -1.51
YPK3YBR028C IRC24P40580 263 aa5.63□□□□□ -1.51
YPK3YBR028C UBC11P52492 156 aa5.63□□□□□ -1.51
YPK3YBR028C PIP2P52960 996 aa5.63□□□□□ -1.51
YPK3YBR028C MTD1Q02046 320 aaKnown RBP5.63□□□□□ -1.51
YPK3YBR028C NSE5Q03718 556 aa5.63□□□□□ -1.51
YPK3YBR028C ADY4Q05955 493 aa5.63□□□□□ -1.51
YPK3YBR028C AIM39Q08223 395 aa5.63□□□□□ -1.51
YPK3YBR028C NYV1Q12255 253 aa5.63□□□□□ -1.51
YPK3YBR028C PIF1P07271 859 aa5.62□□□□□ -1.51
YPK3YBR028C MTC7P32633 139 aa5.62□□□□□ -1.51
YPK3YBR028C HRB1P38922 454 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
YPK3YBR028C RRP8P38961 392 aaKnown RBP5.62□□□□□ -1.51
YPK3YBR028C ENP2P48234 707 aaKnown RBP5.62□□□□□ -1.51
YPK3YBR028C YEL076C-AP0CX16 216 aa5.61□□□□□ -1.51
YPK3YBR028C YLR464WP0CX17 216 aa5.61□□□□□ -1.51
YPK3YBR028C YEF3P16521 1044 aaKnown RBP5.61□□□□□ -1.51
YPK3YBR028C PRE4P30657 266 aa5.61□□□□□ -1.51
YPK3YBR028C MVD1P32377 396 aaKnown RBP5.61□□□□□ -1.51
YPK3YBR028C YEL076CP39971 216 aa5.61□□□□□ -1.51
YPK3YBR028C HOL1P53389 586 aa5.61□□□□□ -1.51
YPK3YBR028C CNM67P53865 581 aaKnown RBP5.61□□□□□ -1.51
YPK3YBR028C KIN4Q01919 800 aa5.61□□□□□ -1.51
YPK3YBR028C RNT1Q02555 471 aa5.61□□□□□ -1.51
YPK3YBR028C DIA2Q08496 732 aaPredicted RBP5.61□□□□□ -1.51
YPK3YBR028C ALG7P07286 448 aa5.6□□□□□ -1.51
YPK3YBR028C KIN82P25341 720 aa5.6□□□□□ -1.51
YPK3YBR028C PMI40P29952 429 aaKnown RBP5.6□□□□□ -1.51
YPK3YBR028C BCS1P32839 456 aa5.6□□□□□ -1.51
YPK3YBR028C YHR033WP38690 423 aa5.6□□□□□ -1.51
YPK3YBR028C YIL092WP40497 633 aa5.6□□□□□ -1.51
YPK3YBR028C PRM2P40534 656 aa5.6□□□□□ -1.51
YPK3YBR028C CEG1Q01159 459 aaPredicted RBP5.6□□□□□ -1.51
YPK3YBR028C RPS9BP05755 195 aaKnown RBP5.59□□□□□ -1.51
YPK3YBR028C FEN2P25621 512 aaKnown RBP5.59□□□□□ -1.51
YPK3YBR028C CDS1P38221 457 aa5.59□□□□□ -1.51
YPK3YBR028C SUL1P38359 859 aa5.59□□□□□ -1.51
YPK3YBR028C GIP4P39732 760 aa5.59□□□□□ -1.51
YPK3YBR028C YIL077CP40508 320 aa5.59□□□□□ -1.51
YPK3YBR028C PAN2P53010 1115 aaPredicted RBP5.59□□□□□ -1.51
YPK3YBR028C PPN1Q04119 674 aa5.59□□□□□ -1.51
YPK3YBR028C RTK1Q12100 620 aaPredicted RBP5.59□□□□□ -1.51
YPK3YBR028C SIR3P06701 978 aa5.59□□□□□ -1.52
YPK3YBR028C PPR1P07272 904 aaPredicted RBP5.59□□□□□ -1.52
YPK3YBR028C PRP22P24384 1145 aaKnown RBP5.59□□□□□ -1.52
YPK3YBR028C HIS7P33734 552 aaKnown RBP5.59□□□□□ -1.52
YPK3YBR028C SFB3P38810 929 aa5.59□□□□□ -1.52
YPK3YBR028C CRG1P38892 291 aaRIP-Chip data5.59□□□□□ -1.52 RIP-Chip
YPK3YBR028C STL1P39932 569 aa5.59□□□□□ -1.52
YPK3YBR028C SPO1P53541 631 aa5.59□□□□□ -1.52
YPK3YBR028C MLC2Q06580 163 aa5.59□□□□□ -1.52
YPK3YBR028C YOL073CQ08232 322 aa5.59□□□□□ -1.52
YPK3YBR028C HOP1P20050 605 aa5.58□□□□□ -1.52
YPK3YBR028C PTP2P29461 750 aa5.58□□□□□ -1.52
YPK3YBR028C TRM2P33753 639 aa5.58□□□□□ -1.52
YPK3YBR028C YKL133CP36066 463 aa5.58□□□□□ -1.52
YPK3YBR028C PPS1P38148 807 aa5.58□□□□□ -1.52
YPK3YBR028C COS111P38308 924 aa5.58□□□□□ -1.52
YPK3YBR028C FMP52P40008 231 aa5.58□□□□□ -1.52
YPK3YBR028C RFX1P48743 811 aa5.58□□□□□ -1.52
YPK3YBR028C YFT2Q06676 274 aa5.58□□□□□ -1.52
YPK3YBR028C NUR1Q12066 484 aa5.58□□□□□ -1.52
YPK3YBR028C PHO3P24031 467 aa5.57□□□□□ -1.52
YPK3YBR028C RMA1P36001 430 aaKnown RBP5.57□□□□□ -1.52
YPK3YBR028C MAD2P40958 196 aa5.57□□□□□ -1.52
YPK3YBR028C PUS4P48567 403 aaKnown RBP5.57□□□□□ -1.52
YPK3YBR028C YDL183CP48569 320 aa5.57□□□□□ -1.52
YPK3YBR028C MNT2P53059 558 aa5.57□□□□□ -1.52
YPK3YBR028C YKL033W-AQ86ZR7 236 aa5.57□□□□□ -1.52
YPK3YBR028C TUP1P16649 713 aa5.56□□□□□ -1.52
YPK3YBR028C YCR015CP25616 317 aa5.56□□□□□ -1.52
YPK3YBR028C MSS1P32559 526 aaPredicted RBP5.56□□□□□ -1.52
YPK3YBR028C PHO11P35842 467 aa5.56□□□□□ -1.52
YPK3YBR028C PHO12P38693 467 aa5.56□□□□□ -1.52
YPK3YBR028C FTR1P40088 404 aa5.56□□□□□ -1.52
YPK3YBR028C PEF1P53238 335 aa5.56□□□□□ -1.52
YPK3YBR028C FHN1P53279 174 aa5.56□□□□□ -1.52
YPK3YBR028C CHS5Q12114 671 aaKnown RBP5.56□□□□□ -1.52
YPK3YBR028C PSF3Q12146 194 aa5.56□□□□□ -1.52
YPK3YBR028C YOL114CQ12322 202 aa5.56□□□□□ -1.52
YPK3YBR028C VPS5Q92331 675 aa5.56□□□□□ -1.52
YPK3YBR028C HMG2P12684 1045 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms