RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Col11a1Q61245 1804 aa17.17■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Gnai2P08752 355 aaKnown RBP17.17■□□□□ 0.34
Ldb3-207ENSMUST00000227819 CrkQ64010 304 aa17.17■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Secisbp2lQ6A098 1086 aaKnown RBP17.17■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Sez6lQ6P1D5 963 aa17.17■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Trpv1Q704Y3 839 aa17.17■□□□□ 0.34
Ldb3-207ENSMUST00000227819 SpidrQ8BGX7 933 aa17.17■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Ier5O89113 308 aa17.16■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Psen2Q61144 448 aa17.16■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Kiaa0753Q6A000 959 aa17.16■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Sptlc3Q8BG54 563 aa17.16■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Tmc2Q8R4P4 888 aa17.16■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Snap47Q8R570 413 aa17.16■□□□□ 0.34
Ldb3-207ENSMUST00000227819 RarsQ9D0I9 660 aaKnown RBP17.16■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Nfe2l3Q9WTM4 660 aa17.16■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Nova2D3YVV7 556 aaKnown RBP17.15■□□□□ 0.34
Ldb3-207ENSMUST00000227819 UncxO08934 530 aa17.15■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Sept1P42209 366 aa17.15■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Cwc27Q3TKY6 469 aa17.15■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Pcdhb5Q91XZ5 792 aa17.15■□□□□ 0.34
Ldb3-207ENSMUST00000227819 NsmfQ99NF2 532 aa17.15■□□□□ 0.34
Ldb3-207ENSMUST00000227819 Bcs1lQ9CZP5 418 aa17.15■□□□□ 0.34
Ldb3-207ENSMUST00000227819 A0A1W2P7S8 802 aa17.14■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Skint7A7XV04 395 aa17.14■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Cdc5lQ6A068 802 aaKnown RBP17.14■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Fam84aQ9D650 292 aa17.14■□□□□ 0.33
Ldb3-207ENSMUST00000227819 S1pr4Q9Z0L1 386 aa17.14■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Ccne2Q9Z238 404 aa17.14■□□□□ 0.33
Ldb3-207ENSMUST00000227819 CpdO89001 1377 aa17.14■□□□□ 0.33
Ldb3-207ENSMUST00000227819 ParnQ8VDG3 624 aa17.13■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Kdm3aQ6PCM1 1323 aa17.13■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Npc1l1Q6T3U4 1333 aa17.13■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Timm10P62073 90 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Tmprss11eQ5S248 423 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Krt74Q6IFZ9 495 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Podnl1Q6P3Y9 559 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Rbm15bQ6PHZ5 887 aaKnown RBP17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Edc3Q8K2D3 508 aaKnown RBP17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Noc3lQ8VI84 807 aaKnown RBP17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 MvpQ9EQK5 861 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Itgb7P26011 806 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Cacnb3P54285 484 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Ppp1r21Q3TDD9 780 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Tfcp2l1Q3UNW5 479 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Pram1Q6BCL1 675 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Adam39Q7M762 756 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Jag1Q9QXX0 1218 aa17.12■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Triml2E9PW10 424 aa17.11■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Gm3893E9Q1I1 302 aa17.11■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Klrg2Q3UM83 387 aa17.11■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Izumo3A6PWV3 263 aa17.1■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Serpinb2P12388 415 aa17.1■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Neurod6P48986 337 aa17.1■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Ppp4r3aQ6P2K6 820 aa17.1■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Tmem39bQ810L4 492 aa17.1■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Ift57Q8BXG3 429 aa17.1■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Rtp1Q8C8C1 263 aa17.1■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Ddx49Q4FZF3 480 aaKnown RBP17.09■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Tmem179Q8BHH9 233 aa17.09■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Pank1Q8K4K6 548 aa17.09■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Uba5Q8VE47 403 aa17.09■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Bcorl1A2AQH4 1781 aa17.09■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Nphp3Q7TNH6 1325 aa17.08■□□□□ 0.33
Ldb3-207ENSMUST00000227819 Gxylt1Q3UHH8 404 aa17.08■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Kif22Q3V300 660 aa17.08■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Senp5Q6NXL6 749 aa17.08■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Mapk4Q6P5G0 583 aa17.08■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Prss51A0A286YDY8 319 aa17.07■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Clrn2B2RVW2 232 aa17.07■□□□□ 0.32
Ldb3-207ENSMUST00000227819 CnpP16330 420 aa17.07■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Gsdma2Q32M21 443 aa17.07■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Sulf1Q8K007 870 aa17.07■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Ppp1r42Q8R1Z4 357 aa17.07■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Zbtb12Q9Z150 459 aa17.07■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Lbhd1A0A087WPA0 259 aa17.06■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Irx3P81067 507 aa17.06■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Spryd7Q3TFQ1 196 aa17.06■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Lgr6Q3UVD5 967 aa17.06■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Tm4sf1Q64302 202 aa17.06■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Ankrd13aQ80UP5 588 aa17.06■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Srgap3Q812A2 1099 aa17.06■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Aldh1l2Q8K009 923 aa17.06■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Armc3A2AU72 881 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 L1camP11627 1260 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Acsl1P41216 699 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Atp8b2P98199 1209 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Nlrp1aQ2LKU9 1182 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Ireb2Q811J3 963 aaKnown RBP17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 4930504O13RikQ8C5Z9 145 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Txnrd3Q99MD6 652 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Gimap3Q99MI6 301 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 TsksO54887 585 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Supt5hO55201 1082 aaKnown RBP17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Trmt1Q3TX08 663 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Washc4Q3UMB9 1173 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 NfkbibQ60778 359 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Fam102bQ8BQS4 339 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Mboat7Q8CHK3 473 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Pbx4Q99NE9 378 aa17.05■□□□□ 0.32
Ldb3-207ENSMUST00000227819 Borcs6Q9D6W8 360 aa17.05■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms