Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Gm25239-201ENSMUST00000174915 86 ntBASIC46.52■■■■■ 5.04
Kdm3aQ6PCM1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.88■■■■■ 4.45
Kdm3aQ6PCM1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.35■■■■■ 4.37
Kdm3aQ6PCM1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.04■■■■■ 4.16
Kdm3aQ6PCM1 Gm15042-201ENSMUST00000120212 883 ntBASIC40.95■■■■■ 4.15
Kdm3aQ6PCM1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.24■■■■■ 4.03
Kdm3aQ6PCM1 Gm24109-201ENSMUST00000175489 103 ntBASIC40.19■■■■■ 4.02
Kdm3aQ6PCM1 Gm15045-201ENSMUST00000117359 883 ntBASIC40.08■■■■■ 4.01
Kdm3aQ6PCM1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.74■■■■□ 3.95
Kdm3aQ6PCM1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
Kdm3aQ6PCM1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.27■■■■□ 3.88
Kdm3aQ6PCM1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
Kdm3aQ6PCM1 Gm23366-201ENSMUST00000175022 89 ntBASIC38.93■■■■□ 3.82
Kdm3aQ6PCM1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
Kdm3aQ6PCM1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
Kdm3aQ6PCM1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.32■■■■□ 3.73
Kdm3aQ6PCM1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Kdm3aQ6PCM1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.03■■■■□ 3.68
Kdm3aQ6PCM1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
Kdm3aQ6PCM1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
Kdm3aQ6PCM1 Psd-208ENSMUST00000224556 2034 ntBASIC37.84■■■■□ 3.65
Kdm3aQ6PCM1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.74■■■■□ 3.63
Kdm3aQ6PCM1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.72■■■■□ 3.63
Kdm3aQ6PCM1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.62■■■■□ 3.61
Kdm3aQ6PCM1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Kdm3aQ6PCM1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.6■■■■□ 3.61
Kdm3aQ6PCM1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.52■■■■□ 3.6
Kdm3aQ6PCM1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.48■■■■□ 3.59
Kdm3aQ6PCM1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.35■■■■□ 3.57
Kdm3aQ6PCM1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.14■■■■□ 3.54
Kdm3aQ6PCM1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.94■■■■□ 3.5
Kdm3aQ6PCM1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.91■■■■□ 3.5
Kdm3aQ6PCM1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Kdm3aQ6PCM1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Kdm3aQ6PCM1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
Kdm3aQ6PCM1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
Kdm3aQ6PCM1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Kdm3aQ6PCM1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.63■■■■□ 3.45
Kdm3aQ6PCM1 Gm25238-201ENSMUST00000174914 89 ntBASIC36.59■■■■□ 3.45
Kdm3aQ6PCM1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.54■■■■□ 3.44
Kdm3aQ6PCM1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Kdm3aQ6PCM1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.3■■■■□ 3.4
Kdm3aQ6PCM1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Kdm3aQ6PCM1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Kdm3aQ6PCM1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.05■■■■□ 3.36
Kdm3aQ6PCM1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.04■■■■□ 3.36
Kdm3aQ6PCM1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Kdm3aQ6PCM1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Kdm3aQ6PCM1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.95■■■■□ 3.35
Kdm3aQ6PCM1 Gm27325-201ENSMUST00000175467 74 ntBASIC35.93■■■■□ 3.34
Kdm3aQ6PCM1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.83■■■■□ 3.33
Kdm3aQ6PCM1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Kdm3aQ6PCM1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.65■■■■□ 3.3
Kdm3aQ6PCM1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
Kdm3aQ6PCM1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.63■■■■□ 3.29
Kdm3aQ6PCM1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
Kdm3aQ6PCM1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.55■■■■□ 3.28
Kdm3aQ6PCM1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.48■■■■□ 3.27
Kdm3aQ6PCM1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.47■■■■□ 3.27
Kdm3aQ6PCM1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
Kdm3aQ6PCM1 Gm10524-201ENSMUST00000181931 1893 ntBASIC35.39■■■■□ 3.26
Kdm3aQ6PCM1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Kdm3aQ6PCM1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.35■■■■□ 3.25
Kdm3aQ6PCM1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Kdm3aQ6PCM1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.28■■■■□ 3.24
Kdm3aQ6PCM1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Kdm3aQ6PCM1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.22■■■■□ 3.23
Kdm3aQ6PCM1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.2■■■■□ 3.23
Kdm3aQ6PCM1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Kdm3aQ6PCM1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Kdm3aQ6PCM1 Rab21-202ENSMUST00000218831 843 ntBASIC35.14■■■■□ 3.22
Kdm3aQ6PCM1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.07■■■■□ 3.21
Kdm3aQ6PCM1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
Kdm3aQ6PCM1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Kdm3aQ6PCM1 Gm25262-201ENSMUST00000174934 133 ntBASIC34.98■■■■□ 3.19
Kdm3aQ6PCM1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.98■■■■□ 3.19
Kdm3aQ6PCM1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34.97■■■■□ 3.19
Kdm3aQ6PCM1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Kdm3aQ6PCM1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.9■■■■□ 3.18
Kdm3aQ6PCM1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Kdm3aQ6PCM1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Kdm3aQ6PCM1 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.79■■■■□ 3.16
Kdm3aQ6PCM1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
Kdm3aQ6PCM1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.65■■■■□ 3.14
Kdm3aQ6PCM1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.62■■■■□ 3.13
Kdm3aQ6PCM1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.61■■■■□ 3.13
Kdm3aQ6PCM1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Kdm3aQ6PCM1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.55■■■■□ 3.12
Kdm3aQ6PCM1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.55■■■■□ 3.12
Kdm3aQ6PCM1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Kdm3aQ6PCM1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.48■■■■□ 3.11
Kdm3aQ6PCM1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
Kdm3aQ6PCM1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Kdm3aQ6PCM1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Kdm3aQ6PCM1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Kdm3aQ6PCM1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Kdm3aQ6PCM1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
Kdm3aQ6PCM1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Kdm3aQ6PCM1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.27■■■■□ 3.08
Kdm3aQ6PCM1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.26■■■■□ 3.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms