Protein–RNA interactions for Protein: Q6BCL1

Pram1, PML-RARA-regulated adapter molecule 1, mousemouse

Predictions only

Length 675 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pram1Q6BCL1 Gm25239-201ENSMUST00000174915 86 ntBASIC46.35■■■■■ 5.01
Pram1Q6BCL1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC42.85■■■■■ 4.45
Pram1Q6BCL1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC42.18■■■■■ 4.34
Pram1Q6BCL1 Gm15042-201ENSMUST00000120212 883 ntBASIC40.55■■■■■ 4.08
Pram1Q6BCL1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.04
Pram1Q6BCL1 Gm24109-201ENSMUST00000175489 103 ntBASIC40.15■■■■■ 4.02
Pram1Q6BCL1 Gm15045-201ENSMUST00000117359 883 ntBASIC39.7■■■■□ 3.95
Pram1Q6BCL1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
Pram1Q6BCL1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
Pram1Q6BCL1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC39.1■■■■□ 3.85
Pram1Q6BCL1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.94■■■■□ 3.82
Pram1Q6BCL1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
Pram1Q6BCL1 Gm23366-201ENSMUST00000175022 89 ntBASIC38.68■■■■□ 3.78
Pram1Q6BCL1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
Pram1Q6BCL1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
Pram1Q6BCL1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
Pram1Q6BCL1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.73■■■■□ 3.63
Pram1Q6BCL1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.56■■■■□ 3.6
Pram1Q6BCL1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
Pram1Q6BCL1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC37.42■■■■□ 3.58
Pram1Q6BCL1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC37.39■■■■□ 3.58
Pram1Q6BCL1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC37.22■■■■□ 3.55
Pram1Q6BCL1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.19■■■■□ 3.54
Pram1Q6BCL1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.16■■■■□ 3.54
Pram1Q6BCL1 Psd-208ENSMUST00000224556 2034 ntBASIC37.12■■■■□ 3.53
Pram1Q6BCL1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Pram1Q6BCL1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.09■■■■□ 3.53
Pram1Q6BCL1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.07■■■■□ 3.52
Pram1Q6BCL1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.97■■■■□ 3.51
Pram1Q6BCL1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.87■■■■□ 3.49
Pram1Q6BCL1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Pram1Q6BCL1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Pram1Q6BCL1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.7■■■■□ 3.47
Pram1Q6BCL1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Pram1Q6BCL1 Gm25238-201ENSMUST00000174914 89 ntBASIC36.58■■■■□ 3.45
Pram1Q6BCL1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC36.46■■■■□ 3.43
Pram1Q6BCL1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Pram1Q6BCL1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.22■■■■□ 3.39
Pram1Q6BCL1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Pram1Q6BCL1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.02■■■■□ 3.36
Pram1Q6BCL1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Pram1Q6BCL1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Pram1Q6BCL1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC35.77■■■■□ 3.32
Pram1Q6BCL1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Pram1Q6BCL1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC35.69■■■■□ 3.3
Pram1Q6BCL1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Pram1Q6BCL1 Gm27325-201ENSMUST00000175467 74 ntBASIC35.54■■■■□ 3.28
Pram1Q6BCL1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
Pram1Q6BCL1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.53■■■■□ 3.28
Pram1Q6BCL1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.51■■■■□ 3.27
Pram1Q6BCL1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.38■■■■□ 3.25
Pram1Q6BCL1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC35.34■■■■□ 3.25
Pram1Q6BCL1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
Pram1Q6BCL1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC35.26■■■■□ 3.23
Pram1Q6BCL1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC35.22■■■■□ 3.23
Pram1Q6BCL1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35.12■■■■□ 3.21
Pram1Q6BCL1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
Pram1Q6BCL1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Pram1Q6BCL1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
Pram1Q6BCL1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Pram1Q6BCL1 Gm25262-201ENSMUST00000174934 133 ntBASIC34.93■■■■□ 3.18
Pram1Q6BCL1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Pram1Q6BCL1 Rab21-202ENSMUST00000218831 843 ntBASIC34.84■■■■□ 3.17
Pram1Q6BCL1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC34.83■■■■□ 3.17
Pram1Q6BCL1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
Pram1Q6BCL1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC34.72■■■■□ 3.15
Pram1Q6BCL1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Pram1Q6BCL1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
Pram1Q6BCL1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
Pram1Q6BCL1 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.62■■■■□ 3.13
Pram1Q6BCL1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.62■■■■□ 3.13
Pram1Q6BCL1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Pram1Q6BCL1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Pram1Q6BCL1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34.55■■■■□ 3.12
Pram1Q6BCL1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Pram1Q6BCL1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC34.54■■■■□ 3.12
Pram1Q6BCL1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Pram1Q6BCL1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Pram1Q6BCL1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.49■■■■□ 3.11
Pram1Q6BCL1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34.47■■■■□ 3.11
Pram1Q6BCL1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC34.47■■■■□ 3.11
Pram1Q6BCL1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Pram1Q6BCL1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
Pram1Q6BCL1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34.34■■■■□ 3.09
Pram1Q6BCL1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.31■■■■□ 3.08
Pram1Q6BCL1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.3■■■■□ 3.08
Pram1Q6BCL1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
Pram1Q6BCL1 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.28■■■■□ 3.08
Pram1Q6BCL1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC34.26■■■■□ 3.08
Pram1Q6BCL1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Pram1Q6BCL1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Pram1Q6BCL1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.16■■■■□ 3.06
Pram1Q6BCL1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34.14■■■■□ 3.06
Pram1Q6BCL1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Pram1Q6BCL1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.04■■■■□ 3.04
Pram1Q6BCL1 Gm26115-201ENSMUST00000175605 87 ntBASIC34.02■■■■□ 3.04
Pram1Q6BCL1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34.01■■■■□ 3.03
Pram1Q6BCL1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Pram1Q6BCL1 Gm8109-201ENSMUST00000194076 746 ntBASIC33.92■■■■□ 3.02
Pram1Q6BCL1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.89■■■■□ 3.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms