RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCD6	YPR129W	TAN1	P53072	289 aa	Predicted RBP	4.29	□□□□□ -1.72
SCD6	YPR129W	NAN1	Q02931	896 aa	Known RBP	4.29	□□□□□ -1.72
SCD6	YPR129W	SEC3	P33332	1336 aa	Known RBP	4.28	□□□□□ -1.72
SCD6	YPR129W	DIF1	O13577	133 aa		4.28	□□□□□ -1.72
SCD6	YPR129W	PGK1	P00560	416 aa	Known RBP	4.28	□□□□□ -1.72
SCD6	YPR129W	ERG11	P10614	530 aa		4.28	□□□□□ -1.72
SCD6	YPR129W	ADE2	P21264	571 aa	Known RBP	4.28	□□□□□ -1.72
SCD6	YPR129W	LTV1	P34078	463 aa		4.28	□□□□□ -1.72
SCD6	YPR129W	TRZ1	P36159	838 aa	Predicted RBP	4.28	□□□□□ -1.72
SCD6	YPR129W	YHR112C	P38716	378 aa		4.28	□□□□□ -1.72
SCD6	YPR129W	TY4A-J	P47023	414 aa		4.28	□□□□□ -1.72
SCD6	YPR129W	HXT16	P47185	567 aa		4.28	□□□□□ -1.72
SCD6	YPR129W	NOP7	P53261	605 aa	Known RBP	4.28	□□□□□ -1.72
SCD6	YPR129W	DOS2	P54858	310 aa		4.28	□□□□□ -1.72
SCD6	YPR129W	ATP25	Q03153	612 aa		4.28	□□□□□ -1.72
SCD6	YPR129W	MLH3	Q12083	715 aa		4.28	□□□□□ -1.72
SCD6	YPR129W	YLR149C	Q99296	730 aa		4.28	□□□□□ -1.72
SCD6	YPR129W	DAL5	P15365	543 aa		4.27	□□□□□ -1.73
SCD6	YPR129W	THR1	P17423	357 aa	Known RBP	4.27	□□□□□ -1.73
SCD6	YPR129W	RCF1	Q03713	159 aa		4.27	□□□□□ -1.73
SCD6	YPR129W	BUD21	Q08492	214 aa	Predicted RBP	4.27	□□□□□ -1.73
SCD6	YPR129W	MET7	Q08645	548 aa		4.27	□□□□□ -1.73
SCD6	YPR129W	APL5	Q08951	932 aa	Known RBP	4.27	□□□□□ -1.73
SCD6	YPR129W	CLF1	Q12309	687 aa	Predicted RBP	4.27	□□□□□ -1.73
SCD6	YPR129W	OSH2	Q12451	1283 aa		4.27	□□□□□ -1.73
SCD6	YPR129W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
SCD6	YPR129W	FUB1	P25659	250 aa		4.26	□□□□□ -1.73
SCD6	YPR129W	GMH1	P36125	273 aa		4.26	□□□□□ -1.73
SCD6	YPR129W	YMR124W	P39523	943 aa	Known RBP	4.26	□□□□□ -1.73
SCD6	YPR129W	XBP1	P40489	647 aa		4.26	□□□□□ -1.73
SCD6	YPR129W	ARG5,6	Q01217	863 aa		4.26	□□□□□ -1.73
SCD6	YPR129W	MCM21	Q06675	368 aa		4.26	□□□□□ -1.73
SCD6	YPR129W	YDL124W	Q07551	312 aa	Known RBP	4.26	□□□□□ -1.73
SCD6	YPR129W	HRP1	Q99383	534 aa	Known RBP	4.26	□□□□□ -1.73
SCD6	YPR129W	TOM70	P07213	617 aa	Known RBP	4.25	□□□□□ -1.73
SCD6	YPR129W	HSP60	P19882	572 aa	Known RBP	4.25	□□□□□ -1.73
SCD6	YPR129W	RRP14	P36080	434 aa	Known RBP	4.25	□□□□□ -1.73
SCD6	YPR129W	APT2	P36973	181 aa		4.25	□□□□□ -1.73
SCD6	YPR129W	SEC9	P40357	651 aa		4.25	□□□□□ -1.73
SCD6	YPR129W	DJP1	P40564	432 aa		4.25	□□□□□ -1.73
SCD6	YPR129W	SEC27	P41811	889 aa	Known RBP	4.25	□□□□□ -1.73
SCD6	YPR129W	ALG2	P43636	503 aa		4.25	□□□□□ -1.73
SCD6	YPR129W	MPS1	P54199	764 aa		4.25	□□□□□ -1.73
SCD6	YPR129W	BRE1	Q07457	700 aa	Known RBP	4.25	□□□□□ -1.73
SCD6	YPR129W	CFT2	Q12102	859 aa	Predicted RBP	4.25	□□□□□ -1.73
SCD6	YPR129W	USV1	Q12132	391 aa		4.25	□□□□□ -1.73
SCD6	YPR129W	ZRT2	Q12436	422 aa		4.25	□□□□□ -1.73
SCD6	YPR129W	RPA135	P22138	1203 aa	Known RBP	4.24	□□□□□ -1.73
SCD6	YPR129W	STB2	P46679	850 aa		4.24	□□□□□ -1.73
SCD6	YPR129W	BPL1	P48445	690 aa	Predicted RBP	4.24	□□□□□ -1.73
SCD6	YPR129W	PRP3	Q03338	469 aa	Predicted RBP	4.24	□□□□□ -1.73
SCD6	YPR129W	TAF8	Q03750	510 aa		4.24	□□□□□ -1.73
SCD6	YPR129W	YDR341C	Q05506	607 aa	Known RBP	4.24	□□□□□ -1.73
SCD6	YPR129W	RPN7	Q06103	429 aa	Known RBP	4.24	□□□□□ -1.73
SCD6	YPR129W	RGC1	Q06108	1083 aa	Known RBP	4.24	□□□□□ -1.73
SCD6	YPR129W	IMH1	Q06704	911 aa	Known RBP	4.24	□□□□□ -1.73
SCD6	YPR129W	SSF2	Q12153	453 aa	Predicted RBP	4.24	□□□□□ -1.73
SCD6	YPR129W	CIT1	P00890	479 aa		4.23	□□□□□ -1.73
SCD6	YPR129W	KCC4	P25389	1037 aa		4.23	□□□□□ -1.73
SCD6	YPR129W	WRS1	Q12109	432 aa	Known RBP	4.23	□□□□□ -1.73
SCD6	YPR129W	NUP1	P20676	1076 aa		4.22	□□□□□ -1.73
SCD6	YPR129W	ERG6	P25087	383 aa	Known RBP	4.22	□□□□□ -1.73
SCD6	YPR129W	DEP1	P31385	405 aa		4.22	□□□□□ -1.73
SCD6	YPR129W	SET3	P36124	751 aa		4.22	□□□□□ -1.73
SCD6	YPR129W	NPR3	P38742	1146 aa		4.22	□□□□□ -1.73
SCD6	YPR129W	HUL4	P40985	892 aa		4.22	□□□□□ -1.73
SCD6	YPR129W	YGL081W	P53156	320 aa		4.22	□□□□□ -1.73
SCD6	YPR129W	ORC4	P54791	529 aa		4.22	□□□□□ -1.73
SCD6	YPR129W	FMP30	Q02883	468 aa		4.22	□□□□□ -1.73
SCD6	YPR129W	CEF1	Q03654	590 aa	Predicted RBP	4.22	□□□□□ -1.73
SCD6	YPR129W	GIR2	Q03768	265 aa	Predicted RBP	4.22	□□□□□ -1.73
SCD6	YPR129W	YDR338C	Q05497	695 aa		4.22	□□□□□ -1.73
SCD6	YPR129W	CRP1	P38845	465 aa	Known RBP	4.21	□□□□□ -1.74
SCD6	YPR129W	ALY2	P47029	1046 aa		4.21	□□□□□ -1.74
SCD6	YPR129W	MEH1	Q02205	184 aa		4.21	□□□□□ -1.74
SCD6	YPR129W	CIR2	Q08822	631 aa		4.21	□□□□□ -1.74
SCD6	YPR129W	NOP58	Q12499	511 aa	Known RBP	4.21	□□□□□ -1.74
SCD6	YPR129W	TY1B-A	O13527	1196 aa	Known RBP	4.2	□□□□□ -1.74
SCD6	YPR129W	RAD4	P14736	754 aa		4.2	□□□□□ -1.74
SCD6	YPR129W	SAT4	P25333	603 aa	Known RBP	4.2	□□□□□ -1.74
SCD6	YPR129W	MFT1	P33441	392 aa	Known RBP	4.2	□□□□□ -1.74
SCD6	YPR129W	GET2	P40056	285 aa		4.2	□□□□□ -1.74
SCD6	YPR129W	YJR008W	P47085	338 aa		4.2	□□□□□ -1.74
SCD6	YPR129W	VID30	P53076	958 aa		4.2	□□□□□ -1.74
SCD6	YPR129W	EAF7	P53911	425 aa	Known RBP	4.2	□□□□□ -1.74
SCD6	YPR129W	ECM16	Q04217	1267 aa	Known RBP	4.2	□□□□□ -1.74
SCD6	YPR129W	PSK2	Q08217	1101 aa		4.2	□□□□□ -1.74
SCD6	YPR129W	ADE5,7	P07244	802 aa	Known RBP	4.19	□□□□□ -1.74
SCD6	YPR129W	STE12	P13574	688 aa		4.19	□□□□□ -1.74
SCD6	YPR129W	APN1	P22936	367 aa		4.19	□□□□□ -1.74
SCD6	YPR129W	RAD51	P25454	400 aa		4.19	□□□□□ -1.74
SCD6	YPR129W	PER1	P25625	357 aa		4.19	□□□□□ -1.74
SCD6	YPR129W	UGP1	P32861	499 aa	Known RBP	4.19	□□□□□ -1.74
SCD6	YPR129W	PIM1	P36775	1133 aa		4.19	□□□□□ -1.74
SCD6	YPR129W	YMC2	P38087	329 aa		4.19	□□□□□ -1.74
SCD6	YPR129W	AIM20	P40451	204 aa		4.19	□□□□□ -1.74
SCD6	YPR129W	SMC3	P47037	1230 aa		4.19	□□□□□ -1.74
SCD6	YPR129W	YGR125W	P53273	1036 aa		4.19	□□□□□ -1.74
SCD6	YPR129W	HMO1	Q03973	246 aa	Known RBP	4.19	□□□□□ -1.74
SCD6	YPR129W	TDA9	Q04545	1251 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms