RNA–Protein interactions for RNA: YPL124W

SPC29, Transcript of Inner plaque spindle pole body (SPB) component, yeast

Gene SPC29, Length 762 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC29	YPL124W	NOP9	P47077	666 aa	Known RBP	4.22	□□□□□ -1.73
SPC29	YPL124W	NPY1	P53164	384 aa		4.22	□□□□□ -1.73
SPC29	YPL124W	NOP7	P53261	605 aa	Known RBP	4.22	□□□□□ -1.73
SPC29	YPL124W	CDC53	Q12018	815 aa	Known RBP	4.22	□□□□□ -1.73
SPC29	YPL124W	CLF1	Q12309	687 aa	Predicted RBP	4.22	□□□□□ -1.73
SPC29	YPL124W	CCR4	P31384	837 aa	Known RBP	4.21	□□□□□ -1.74
SPC29	YPL124W	TMT1	P32643	299 aa		4.21	□□□□□ -1.74
SPC29	YPL124W	YKR018C	P36114	725 aa		4.21	□□□□□ -1.74
SPC29	YPL124W	YKR051W	P36142	418 aa		4.21	□□□□□ -1.74
SPC29	YPL124W	RPN10	P38886	268 aa	Known RBP	4.21	□□□□□ -1.74
SPC29	YPL124W	OSW1	Q08692	278 aa		4.21	□□□□□ -1.74
SPC29	YPL124W	GMH1	P36125	273 aa		4.2	□□□□□ -1.74
SPC29	YPL124W	MUP3	P38734	546 aa		4.2	□□□□□ -1.74
SPC29	YPL124W	THI22	Q06490	572 aa		4.2	□□□□□ -1.74
SPC29	YPL124W	USV1	Q12132	391 aa		4.2	□□□□□ -1.74
SPC29	YPL124W	HOM2	P13663	365 aa	Known RBP	4.19	□□□□□ -1.74
SPC29	YPL124W	ORC2	P32833	620 aa		4.19	□□□□□ -1.74
SPC29	YPL124W	BCS1	P32839	456 aa		4.19	□□□□□ -1.74
SPC29	YPL124W	NNF1	P47149	201 aa		4.19	□□□□□ -1.74
SPC29	YPL124W	ARP4	P80428	489 aa		4.19	□□□□□ -1.74
SPC29	YPL124W	LEE1	Q02799	301 aa	Known RBP	4.19	□□□□□ -1.74
SPC29	YPL124W	YAP7	Q08182	245 aa		4.19	□□□□□ -1.74
SPC29	YPL124W	PRP28	P23394	588 aa		4.18	□□□□□ -1.74
SPC29	YPL124W	HSL7	P38274	827 aa		4.18	□□□□□ -1.74
SPC29	YPL124W	BIT2	P38346	545 aa		4.18	□□□□□ -1.74
SPC29	YPL124W	PCL10	P53124	433 aa		4.18	□□□□□ -1.74
SPC29	YPL124W	YGR151C	P53287	111 aa		4.18	□□□□□ -1.74
SPC29	YPL124W	NHX1	Q04121	633 aa		4.18	□□□□□ -1.74
SPC29	YPL124W	RPN7	Q06103	429 aa	Known RBP	4.18	□□□□□ -1.74
SPC29	YPL124W	KCC4	P25389	1037 aa		4.17	□□□□□ -1.74
SPC29	YPL124W	HOG1	P32485	435 aa		4.17	□□□□□ -1.74
SPC29	YPL124W	YMC2	P38087	329 aa		4.17	□□□□□ -1.74
SPC29	YPL124W	MIT1	P40002	666 aa		4.17	□□□□□ -1.74
SPC29	YPL124W	RSC8	P43609	557 aa	Known RBP	4.17	□□□□□ -1.74
SPC29	YPL124W	GLO1	P50107	326 aa		4.17	□□□□□ -1.74
SPC29	YPL124W	RAD18	P10862	487 aa		4.16	□□□□□ -1.74
SPC29	YPL124W	MEF1	P25039	761 aa		4.16	□□□□□ -1.74
SPC29	YPL124W	BUD6	P41697	788 aa		4.16	□□□□□ -1.74
SPC29	YPL124W	RPN4	Q03465	531 aa		4.16	□□□□□ -1.74
SPC29	YPL124W	RIM13	Q03792	727 aa		4.16	□□□□□ -1.74
SPC29	YPL124W	SEG1	Q04279	960 aa		4.16	□□□□□ -1.74
SPC29	YPL124W	BMS1	Q08965	1183 aa	Known RBP	4.16	□□□□□ -1.74
SPC29	YPL124W	YOL098C	Q12496	1037 aa		4.16	□□□□□ -1.74
SPC29	YPL124W	YPT7	P32939	208 aa		4.15	□□□□□ -1.75
SPC29	YPL124W	YNL195C	P40168	261 aa		4.15	□□□□□ -1.75
SPC29	YPL124W	BNA3	P47039	444 aa	Known RBP	4.15	□□□□□ -1.75
SPC29	YPL124W	BRE5	P53741	515 aa	Known RBP	4.15	□□□□□ -1.75
SPC29	YPL124W	DIA2	Q08496	732 aa	Predicted RBP	4.15	□□□□□ -1.75
SPC29	YPL124W	ECM3	Q99252	613 aa		4.15	□□□□□ -1.75
SPC29	YPL124W	SRD1	P09007	221 aa		4.14	□□□□□ -1.75
SPC29	YPL124W	VBA3	P25594	458 aa		4.14	□□□□□ -1.75
SPC29	YPL124W	TIM23	P32897	222 aa		4.14	□□□□□ -1.75
SPC29	YPL124W	KSP1	P38691	1029 aa	Known RBP	4.14	□□□□□ -1.75
SPC29	YPL124W	YHR097C	P38809	366 aa	Known RBP	4.14	□□□□□ -1.75
SPC29	YPL124W	PIG2	P40187	538 aa		4.14	□□□□□ -1.75
SPC29	YPL124W	SET2	P46995	733 aa	Known RBP	4.14	□□□□□ -1.75
SPC29	YPL124W	SLK19	Q08581	821 aa	Known RBP	4.14	□□□□□ -1.75
SPC29	YPL124W	CHS5	Q12114	671 aa	Known RBP	4.14	□□□□□ -1.75
SPC29	YPL124W	YOR131C	Q12486	218 aa		4.14	□□□□□ -1.75
SPC29	YPL124W	PHO5	P00635	467 aa		4.13	□□□□□ -1.75
SPC29	YPL124W	ABF1	P14164	731 aa		4.13	□□□□□ -1.75
SPC29	YPL124W	GSY1	P23337	708 aa		4.13	□□□□□ -1.75
SPC29	YPL124W	MSS1	P32559	526 aa	Predicted RBP	4.13	□□□□□ -1.75
SPC29	YPL124W	APN2	P38207	520 aa		4.13	□□□□□ -1.75
SPC29	YPL124W	COX18	P53239	316 aa		4.13	□□□□□ -1.75
SPC29	YPL124W	SEC5	P89102	971 aa		4.13	□□□□□ -1.75
SPC29	YPL124W	YDL086W	Q07505	273 aa		4.13	□□□□□ -1.75
SPC29	YPL124W	SAT4	P25333	603 aa	Known RBP	4.12	□□□□□ -1.75
SPC29	YPL124W	FEN2	P25621	512 aa	Known RBP	4.12	□□□□□ -1.75
SPC29	YPL124W	MNN4	P36044	1178 aa		4.12	□□□□□ -1.75
SPC29	YPL124W	AKL1	P38080	1108 aa	Known RBP	4.12	□□□□□ -1.75
SPC29	YPL124W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
SPC29	YPL124W	CTP1	P38152	299 aa		4.12	□□□□□ -1.75
SPC29	YPL124W	SSZ1	P38788	538 aa	Known RBP	4.12	□□□□□ -1.75
SPC29	YPL124W	KHA1	P40309	873 aa		4.12	□□□□□ -1.75
SPC29	YPL124W	LTP1	P40347	161 aa		4.12	□□□□□ -1.75
SPC29	YPL124W	MPS3	P47069	682 aa		4.12	□□□□□ -1.75
SPC29	YPL124W	COG8	Q04632	607 aa		4.12	□□□□□ -1.75
SPC29	YPL124W	PGK1	P00560	416 aa	Known RBP	4.11	□□□□□ -1.75
SPC29	YPL124W	STE12	P13574	688 aa		4.11	□□□□□ -1.75
SPC29	YPL124W	RPA135	P22138	1203 aa	Known RBP	4.11	□□□□□ -1.75
SPC29	YPL124W	MSH2	P25847	964 aa		4.11	□□□□□ -1.75
SPC29	YPL124W	YMC1	P32331	307 aa		4.11	□□□□□ -1.75
SPC29	YPL124W	YEL1	P34225	687 aa		4.11	□□□□□ -1.75
SPC29	YPL124W	PMC1	P38929	1173 aa	Predicted RBP	4.11	□□□□□ -1.75
SPC29	YPL124W	DSS1	P39112	969 aa		4.11	□□□□□ -1.75
SPC29	YPL124W	YJR039W	P47107	1121 aa		4.11	□□□□□ -1.75
SPC29	YPL124W	SPC98	P53540	846 aa		4.11	□□□□□ -1.75
SPC29	YPL124W	HFD1	Q04458	532 aa		4.11	□□□□□ -1.75
SPC29	YPL124W	ATG33	Q06485	197 aa		4.11	□□□□□ -1.75
SPC29	YPL124W	ADE5,7	P07244	802 aa	Known RBP	4.1	□□□□□ -1.75
SPC29	YPL124W	SRP40	P32583	406 aa	Predicted RBP	4.1	□□□□□ -1.75
SPC29	YPL124W	UGP1	P32861	499 aa	Known RBP	4.1	□□□□□ -1.75
SPC29	YPL124W	NUP82	P40368	713 aa		4.1	□□□□□ -1.75
SPC29	YPL124W	RFX1	P48743	811 aa		4.1	□□□□□ -1.75
SPC29	YPL124W	NMA2	P53204	395 aa		4.1	□□□□□ -1.75
SPC29	YPL124W	UGO1	Q03327	502 aa		4.1	□□□□□ -1.75
SPC29	YPL124W	POM34	Q12445	299 aa		4.1	□□□□□ -1.75
SPC29	YPL124W	LAM4	P38800	1345 aa		4.1	□□□□□ -1.75
SPC29	YPL124W	CIT2	P08679	460 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 809.3 ms