RNA–Protein interactions for RNA: YOR066W

MSA1, Transcript of Activator of G1-specific transcription factors MBF and SBF, yeast

Gene MSA1, Length 1,890 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSA1	YOR066W	CTH1	P47976	325 aa		4.88	□□□□□ -1.63
MSA1	YOR066W	VPS62	P53285	467 aa		4.88	□□□□□ -1.63
MSA1	YOR066W	ISA1	Q07821	250 aa	Predicted RBP	4.88	□□□□□ -1.63
MSA1	YOR066W	NGL1	Q08213	363 aa	Known RBP	4.88	□□□□□ -1.63
MSA1	YOR066W	CWC2	Q12046	339 aa	Predicted RBP	4.88	□□□□□ -1.63
MSA1	YOR066W	YLR415C	O13578	112 aa		4.87	□□□□□ -1.63
MSA1	YOR066W	RPS17A	P02407	136 aa	Known RBP	4.87	□□□□□ -1.63
MSA1	YOR066W	MSS18	P08593	268 aa		4.87	□□□□□ -1.63
MSA1	YOR066W	RPS17B	P14127	136 aa	Known RBP	4.87	□□□□□ -1.63
MSA1	YOR066W	PRP4	P20053	465 aa	Known RBP	4.87	□□□□□ -1.63
MSA1	YOR066W	QRI7	P43122	407 aa		4.87	□□□□□ -1.63
MSA1	YOR066W	IES1	P43579	692 aa		4.87	□□□□□ -1.63
MSA1	YOR066W	YPS7	Q06325	596 aa		4.87	□□□□□ -1.63
MSA1	YOR066W	OMS1	Q06668	471 aa		4.87	□□□□□ -1.63
MSA1	YOR066W	YDL121C	Q07541	149 aa		4.87	□□□□□ -1.63
MSA1	YOR066W	YOL114C	Q12322	202 aa		4.87	□□□□□ -1.63
MSA1	YOR066W	NPC2	Q12408	173 aa		4.87	□□□□□ -1.63
MSA1	YOR066W	ADE2	P21264	571 aa	Known RBP	4.86	□□□□□ -1.63
MSA1	YOR066W	DGR2	P32330	852 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	MF(ALPHA)2	P32435	120 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	YBR259W	P38338	688 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	DUN1	P39009	513 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	IRC5	P43610	853 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	ARG5,6	Q01217	863 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	GCN5	Q03330	439 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	YAP6	Q03935	383 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	PEX19	Q07418	342 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	DFG16	Q99234	619 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	APA1	P16550	321 aa	Known RBP	4.86	□□□□□ -1.63
MSA1	YOR066W	HXT4	P32467	576 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	POL12	P38121	705 aa	Predicted RBP	4.86	□□□□□ -1.63
MSA1	YOR066W	SIC1	P38634	284 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	YIL092W	P40497	633 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	ENP2	P48234	707 aa	Known RBP	4.86	□□□□□ -1.63
MSA1	YOR066W	ASK10	P48361	1146 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	EXG2	P52911	562 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	CEG1	Q01159	459 aa	Predicted RBP	4.86	□□□□□ -1.63
MSA1	YOR066W	REC102	Q02721	264 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	VHS3	Q08438	674 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	NUR1	Q12066	484 aa		4.86	□□□□□ -1.63
MSA1	YOR066W	PYC1	P11154	1178 aa	Known RBP	4.85	□□□□□ -1.63
MSA1	YOR066W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
MSA1	YOR066W	APL2	P36000	726 aa	Predicted RBP	4.85	□□□□□ -1.63
MSA1	YOR066W	RPP1	P38786	293 aa		4.85	□□□□□ -1.63
MSA1	YOR066W	STL1	P39932	569 aa		4.85	□□□□□ -1.63
MSA1	YOR066W	ACA1	P39970	489 aa		4.85	□□□□□ -1.63
MSA1	YOR066W	EAF5	P39995	279 aa		4.85	□□□□□ -1.63
MSA1	YOR066W	MCM21	Q06675	368 aa		4.85	□□□□□ -1.63
MSA1	YOR066W	ACK1	Q07622	623 aa	Predicted RBP	4.85	□□□□□ -1.63
MSA1	YOR066W	PSR2	Q07949	397 aa		4.85	□□□□□ -1.63
MSA1	YOR066W	PHO3	P24031	467 aa		4.84	□□□□□ -1.63
MSA1	YOR066W	DBF20	P32328	564 aa		4.84	□□□□□ -1.63
MSA1	YOR066W	PET127	P32606	800 aa		4.84	□□□□□ -1.63
MSA1	YOR066W	ECM1	P39715	212 aa		4.84	□□□□□ -1.63
MSA1	YOR066W	SAW1	P39735	261 aa		4.84	□□□□□ -1.63
MSA1	YOR066W	SLU7	Q02775	382 aa	Known RBP	4.84	□□□□□ -1.63
MSA1	YOR066W	STP4	Q07351	490 aa		4.84	□□□□□ -1.63
MSA1	YOR066W	KCS1	Q12494	1050 aa		4.84	□□□□□ -1.63
MSA1	YOR066W	YEL076C-A	P0CX16	216 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	YLR464W	P0CX17	216 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	FRS1	P15624	595 aa	Known RBP	4.83	□□□□□ -1.64
MSA1	YOR066W	PHO81	P17442	1178 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	CDC20	P26309	610 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	PET309	P32522	965 aa	Predicted RBP	4.83	□□□□□ -1.64
MSA1	YOR066W	APT2	P36973	181 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	YHR112C	P38716	378 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	YEL076C	P39971	216 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	TEP1	P53916	434 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	MTD1	Q02046	320 aa	Known RBP	4.83	□□□□□ -1.64
MSA1	YOR066W	YDR132C	Q03900	495 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	TRM11	Q12463	433 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	NKP1	Q12493	238 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	OMA1	P36163	345 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	PLB1	P39105	664 aa		4.83	□□□□□ -1.64
MSA1	YOR066W	RCR2	Q03446	210 aa	Known RBP	4.83	□□□□□ -1.64
MSA1	YOR066W	BRE1	Q07457	700 aa	Known RBP	4.83	□□□□□ -1.64
MSA1	YOR066W	IME1	P21190	360 aa		4.82	□□□□□ -1.64
MSA1	YOR066W	CTF13	P35203	478 aa		4.82	□□□□□ -1.64
MSA1	YOR066W	LRG1	P35688	1017 aa		4.82	□□□□□ -1.64
MSA1	YOR066W	SDS22	P36047	338 aa		4.82	□□□□□ -1.64
MSA1	YOR066W	SAP185	P40856	1058 aa		4.82	□□□□□ -1.64
MSA1	YOR066W	SPT20	P50875	604 aa		4.82	□□□□□ -1.64
MSA1	YOR066W	INP52	P50942	1183 aa		4.82	□□□□□ -1.64
MSA1	YOR066W	SVL3	Q03088	825 aa	Known RBP	4.82	□□□□□ -1.64
MSA1	YOR066W	HMO1	Q03973	246 aa	Known RBP	4.82	□□□□□ -1.64
MSA1	YOR066W	SGO1	Q08490	590 aa		4.82	□□□□□ -1.64
MSA1	YOR066W	PSF3	Q12146	194 aa		4.82	□□□□□ -1.64
MSA1	YOR066W	SEC18	P18759	758 aa	Known RBP	4.81	□□□□□ -1.64
MSA1	YOR066W	MSH1	P25846	959 aa		4.81	□□□□□ -1.64
MSA1	YOR066W	PXA1	P41909	870 aa		4.81	□□□□□ -1.64
MSA1	YOR066W	LSB3	P43603	459 aa	Known RBP	4.81	□□□□□ -1.64
MSA1	YOR066W	ECL1	P48235	211 aa		4.81	□□□□□ -1.64
MSA1	YOR066W	PUS4	P48567	403 aa	Known RBP	4.81	□□□□□ -1.64
MSA1	YOR066W	NRG1	Q03125	231 aa		4.81	□□□□□ -1.64
MSA1	YOR066W	HLR1	Q04429	423 aa		4.81	□□□□□ -1.64
MSA1	YOR066W	VBA4	Q04602	768 aa	Known RBP	4.81	□□□□□ -1.64
MSA1	YOR066W	YLR224W	Q05947	369 aa		4.81	□□□□□ -1.64
MSA1	YOR066W	HIM1	Q06674	414 aa		4.81	□□□□□ -1.64
MSA1	YOR066W	ARP7	Q12406	477 aa		4.81	□□□□□ -1.64
MSA1	YOR066W	RPS13	P05756	151 aa	Known RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms