RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W SNU56Q03782 492 aaKnown RBP8.72□□□□□ -1.01
YPT11YNL304W ATG16Q03818 150 aa8.72□□□□□ -1.01
YPT11YNL304W PUF3Q07807 879 aaKnown RBP RIP-Chip data8.72□□□□□ -1.01not detected
YPT11YNL304W CHS1P08004 1131 aa8.71□□□□□ -1.02
YPT11YNL304W ERG11P10614 530 aa8.71□□□□□ -1.02
YPT11YNL304W GFA1P14742 717 aaKnown RBP8.71□□□□□ -1.02
YPT11YNL304W VBA3P25594 458 aa8.71□□□□□ -1.02
YPT11YNL304W VBA5P36172 582 aa8.71□□□□□ -1.02
YPT11YNL304W NCL1P38205 684 aaKnown RBP8.71□□□□□ -1.02
YPT11YNL304W APN2P38207 520 aa8.71□□□□□ -1.02
YPT11YNL304W XDJ1P39102 459 aa8.71□□□□□ -1.02
YPT11YNL304W SIP5P40210 489 aaKnown RBP8.71□□□□□ -1.02
YPT11YNL304W RPC17P47076 161 aa8.71□□□□□ -1.02
YPT11YNL304W STP1Q00947 519 aa8.71□□□□□ -1.02
YPT11YNL304W SIL1Q08199 421 aa8.71□□□□□ -1.02
YPT11YNL304W PKH2Q12236 1081 aaKnown RBP8.71□□□□□ -1.02
YPT11YNL304W GAL80P04387 435 aa8.7□□□□□ -1.02
YPT11YNL304W HAP2P06774 265 aa8.7□□□□□ -1.02
YPT11YNL304W CIT2P08679 460 aa8.7□□□□□ -1.02
YPT11YNL304W STE11P23561 717 aa8.7□□□□□ -1.02
YPT11YNL304W LRE1P25579 583 aaKnown RBP8.7□□□□□ -1.02
YPT11YNL304W GAC1P28006 793 aa8.7□□□□□ -1.02
YPT11YNL304W BIO2P32451 375 aa8.7□□□□□ -1.02
YPT11YNL304W FRE1P32791 686 aa8.7□□□□□ -1.02
YPT11YNL304W SEG2P34250 1132 aa8.7□□□□□ -1.02
YPT11YNL304W RRP1P35178 278 aaPredicted RBP8.7□□□□□ -1.02
YPT11YNL304W BCH2P36122 765 aa8.7□□□□□ -1.02
YPT11YNL304W RRT2P38332 387 aa8.7□□□□□ -1.02
YPT11YNL304W RGD1P38339 666 aa8.7□□□□□ -1.02
YPT11YNL304W RCK2P38623 610 aa8.7□□□□□ -1.02
YPT11YNL304W YHR202WP38887 602 aa8.7□□□□□ -1.02
YPT11YNL304W SMF1P38925 575 aa8.7□□□□□ -1.02
YPT11YNL304W YMR1P47147 688 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
YPT11YNL304W MUB1Q03162 620 aa8.7□□□□□ -1.02
YPT11YNL304W ARO80Q04052 950 aa8.7□□□□□ -1.02
YPT11YNL304W POB3Q04636 552 aaKnown RBP8.7□□□□□ -1.02
YPT11YNL304W YDR222WQ04925 415 aa8.7□□□□□ -1.02
YPT11YNL304W YLR462WO13556 202 aa8.69□□□□□ -1.02
YPT11YNL304W SCJ1P25303 377 aa8.69□□□□□ -1.02
YPT11YNL304W ABD1P32783 436 aaPredicted RBP8.69□□□□□ -1.02
YPT11YNL304W CNS1P33313 385 aa8.69□□□□□ -1.02
YPT11YNL304W CCL1P37366 393 aa8.69□□□□□ -1.02
YPT11YNL304W AGP2P38090 596 aa8.69□□□□□ -1.02
YPT11YNL304W SLX1P38324 304 aa8.69□□□□□ -1.02
YPT11YNL304W MSC7P38694 644 aa8.69□□□□□ -1.02
YPT11YNL304W YHL049CP38722 271 aa8.69□□□□□ -1.02
YPT11YNL304W CCT4P39078 528 aaKnown RBP8.69□□□□□ -1.02
YPT11YNL304W YEL075CP39972 122 aa8.69□□□□□ -1.02
YPT11YNL304W YER189WP40104 122 aa8.69□□□□□ -1.02
YPT11YNL304W YFL064CP43540 174 aa8.69□□□□□ -1.02
YPT11YNL304W SPC98P53540 846 aa8.69□□□□□ -1.02
YPT11YNL304W SXM1Q04175 944 aaKnown RBP8.69□□□□□ -1.02
YPT11YNL304W PIB1Q06651 286 aa8.69□□□□□ -1.02
YPT11YNL304W YOR059CQ08448 450 aaKnown RBP8.69□□□□□ -1.02
YPT11YNL304W TRE1Q08919 783 aa8.69□□□□□ -1.02
YPT11YNL304W NOP58Q12499 511 aaKnown RBP8.69□□□□□ -1.02
YPT11YNL304W YBL111CQ3E7Y5 667 aa8.69□□□□□ -1.02
YPT11YNL304W PMS1P14242 873 aa8.68□□□□□ -1.02
YPT11YNL304W KAR3P17119 729 aa8.68□□□□□ -1.02
YPT11YNL304W OLA1P38219 394 aaKnown RBP8.68□□□□□ -1.02
YPT11YNL304W QNS1P38795 714 aaKnown RBP8.68□□□□□ -1.02
YPT11YNL304W PMC1P38929 1173 aaPredicted RBP8.68□□□□□ -1.02
YPT11YNL304W SAK1P38990 1142 aa8.68□□□□□ -1.02
YPT11YNL304W POL31P46957 487 aa8.68□□□□□ -1.02
YPT11YNL304W BRO1P48582 844 aa8.68□□□□□ -1.02
YPT11YNL304W INP52P50942 1183 aa8.68□□□□□ -1.02
YPT11YNL304W MCM6P53091 1017 aaKnown RBP8.68□□□□□ -1.02
YPT11YNL304W IVY1Q04934 453 aa8.68□□□□□ -1.02
YPT11YNL304W APC5Q08683 685 aa8.68□□□□□ -1.02
YPT11YNL304W PDR1P12383 1068 aa8.67□□□□□ -1.02
YPT11YNL304W SAT4P25333 603 aaKnown RBP8.67□□□□□ -1.02
YPT11YNL304W ADK2P26364 225 aa8.67□□□□□ -1.02
YPT11YNL304W SEC1P30619 724 aaKnown RBP8.67□□□□□ -1.02
YPT11YNL304W VPH1P32563 840 aaKnown RBP8.67□□□□□ -1.02
YPT11YNL304W YBL055CP34220 418 aaPredicted RBP8.67□□□□□ -1.02
YPT11YNL304W PCM1P38628 557 aaKnown RBP8.67□□□□□ -1.02
YPT11YNL304W APM2P38700 605 aa8.67□□□□□ -1.02
YPT11YNL304W JHD1P40034 492 aa8.67□□□□□ -1.02
YPT11YNL304W DSE1P40077 573 aa8.67□□□□□ -1.02
YPT11YNL304W LCP5P40079 357 aaPredicted RBP8.67□□□□□ -1.02
YPT11YNL304W RPT2P40327 437 aaKnown RBP8.67□□□□□ -1.02
YPT11YNL304W SAP185P40856 1058 aa8.67□□□□□ -1.02
YPT11YNL304W SNZ3P43545 298 aa8.67□□□□□ -1.02
YPT11YNL304W RSC8P43609 557 aaKnown RBP8.67□□□□□ -1.02
YPT11YNL304W PRP31P49704 494 aaPredicted RBP8.67□□□□□ -1.02
YPT11YNL304W SNZ2P53824 298 aa8.67□□□□□ -1.02
YPT11YNL304W DIG1Q03063 452 aaKnown RBP8.67□□□□□ -1.02
YPT11YNL304W RRB1Q04225 511 aaKnown RBP8.67□□□□□ -1.02
YPT11YNL304W GYL1Q04322 720 aa8.67□□□□□ -1.02
YPT11YNL304W YML083CQ04526 418 aa8.67□□□□□ -1.02
YPT11YNL304W ATG23Q06671 453 aa8.67□□□□□ -1.02
YPT11YNL304W MDM38Q08179 573 aa8.67□□□□□ -1.02
YPT11YNL304W APL5Q08951 932 aaKnown RBP8.67□□□□□ -1.02
YPT11YNL304W SPO21Q12411 609 aa8.67□□□□□ -1.02
YPT11YNL304W ADE3P07245 946 aaKnown RBP8.66□□□□□ -1.02
YPT11YNL304W AEP2P22136 580 aa8.66□□□□□ -1.02
YPT11YNL304W PAP1P29468 568 aaKnown RBP8.66□□□□□ -1.02
YPT11YNL304W UBC6P33296 250 aaPredicted RBP8.66□□□□□ -1.02
YPT11YNL304W YBL036CP38197 257 aa8.66□□□□□ -1.02
YPT11YNL304W YEL023CP39992 682 aa8.66□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms