RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	YKL091C	P33324	310 aa	Known RBP	5.07	□□□□□ -1.6
ATM1	YMR301C	SEG2	P34250	1132 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	YBR056W	P38081	501 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	RFT1	P38206	574 aa	Predicted RBP	5.07	□□□□□ -1.6
ATM1	YMR301C	VAC8	P39968	578 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	FIG4	P42837	879 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	TOS3	P43637	560 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	DAS1	P47005	663 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	RTS3	P53289	263 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	YHM2	Q04013	314 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	HRQ1	Q05549	1077 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	MLH2	Q07980	695 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	MPC54	Q08550	464 aa		5.07	□□□□□ -1.6
ATM1	YMR301C	TPK1	P06244	397 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	RPS14A	P06367	137 aa	Known RBP	5.06	□□□□□ -1.6
ATM1	YMR301C	DUG2	P38149	878 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	RPS14B	P39516	138 aa	Known RBP	5.06	□□□□□ -1.6
ATM1	YMR301C	TAF1	P46677	1066 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
ATM1	YMR301C	TIM8	P57744	87 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	HER2	Q03557	464 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	TIF35	Q04067	274 aa	Known RBP	5.06	□□□□□ -1.6
ATM1	YMR301C	DON1	Q05610	365 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	ERF2	Q06551	359 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	YPR097W	Q06839	1073 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	MED1	Q12321	566 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	HIS5	P07172	385 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	CHS2	P14180	963 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	SFB3	P38810	929 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	LSB6	P42951	607 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	ZAP1	P47043	880 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	ALT1	P52893	592 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	SFB2	P53953	876 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	CEF1	Q03654	590 aa	Predicted RBP	5.06	□□□□□ -1.6
ATM1	YMR301C	PRM6	Q04705	352 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	YOL075C	Q08234	1294 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	SLX4	Q12098	748 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	LSO1	Q3E827	93 aa		5.06	□□□□□ -1.6
ATM1	YMR301C	SIR1	P21691	654 aa		5.05	□□□□□ -1.6
ATM1	YMR301C	RGD1	P38339	666 aa		5.05	□□□□□ -1.6
ATM1	YMR301C	SNF7	P39929	240 aa	Known RBP	5.05	□□□□□ -1.6
ATM1	YMR301C	FTR1	P40088	404 aa		5.05	□□□□□ -1.6
ATM1	YMR301C	LSC2	P53312	427 aa		5.05	□□□□□ -1.6
ATM1	YMR301C	PEX19	Q07418	342 aa		5.05	□□□□□ -1.6
ATM1	YMR301C	YPR027C	Q12079	277 aa		5.05	□□□□□ -1.6
ATM1	YMR301C	PDH1	Q12428	516 aa	Known RBP	5.05	□□□□□ -1.6
ATM1	YMR301C	CHS1	P08004	1131 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	STE11	P23561	717 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	GCD6	P32501	712 aa	Known RBP	5.04	□□□□□ -1.6
ATM1	YMR301C	POL12	P38121	705 aa	Predicted RBP	5.04	□□□□□ -1.6
ATM1	YMR301C	MED6	P38782	295 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	BFA1	P47113	574 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	UTP8	P53276	713 aa	Known RBP	5.04	□□□□□ -1.6
ATM1	YMR301C	TUB4	P53378	473 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	YPR084W	Q06821	456 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	NSE1	Q07913	336 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	RLP24	Q07915	199 aa	Known RBP	5.04	□□□□□ -1.6
ATM1	YMR301C	YPQ1	Q12010	308 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	PIN2	Q12057	282 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	SPE3	Q12074	293 aa	Known RBP	5.04	□□□□□ -1.6
ATM1	YMR301C	NAT1	P12945	854 aa	Known RBP	5.04	□□□□□ -1.6
ATM1	YMR301C	HCM1	P25364	564 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	RRT12	P25381	491 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	RAD16	P31244	790 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	SAC6	P32599	642 aa	Known RBP	5.04	□□□□□ -1.6
ATM1	YMR301C	YIR014W	P40570	242 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	TFG1	P41895	735 aa	Predicted RBP	5.04	□□□□□ -1.6
ATM1	YMR301C	VPS25	P47142	202 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	PSP1	P50896	841 aa	Known RBP	5.04	□□□□□ -1.6
ATM1	YMR301C	YNR061C	P53747	219 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	YNL011C	P53980	444 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	MUB1	Q03162	620 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	WAR1	Q03631	944 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	TMN2	Q04562	672 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	RGA2	Q06407	1009 aa		5.04	□□□□□ -1.6
ATM1	YMR301C	TRP2	P00899	507 aa	Known RBP	5.03	□□□□□ -1.6
ATM1	YMR301C	PCT1	P13259	424 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	KIP1	P28742	1111 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	SWI3	P32591	825 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	FRE1	P32791	686 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	TKL2	P33315	681 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	YKR051W	P36142	418 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	KAP123	P40069	1113 aa	Known RBP	5.03	□□□□□ -1.6
ATM1	YMR301C	SMC3	P47037	1230 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	FAA4	P47912	694 aa	Known RBP	5.03	□□□□□ -1.6
ATM1	YMR301C	VMS1	Q04311	632 aa	Known RBP	5.03	□□□□□ -1.6
ATM1	YMR301C	IWR1	Q07532	353 aa	Predicted RBP	5.03	□□□□□ -1.6
ATM1	YMR301C	ABP140	Q08641	628 aa	Known RBP	5.03	□□□□□ -1.6
ATM1	YMR301C	GPM2	Q12008	311 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	TAF10	Q12030	206 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	MEX67	Q99257	599 aa	Known RBP	5.03	□□□□□ -1.6
ATM1	YMR301C	GAL10	P04397	699 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	GAC1	P28006	793 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	PSO2	P30620	661 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	CBF2	P32504	956 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	SHE3	P38272	425 aa	Known RBP	5.03	□□□□□ -1.6
ATM1	YMR301C	SAH1	P39954	449 aa	Known RBP	5.03	□□□□□ -1.6
ATM1	YMR301C	MID1	P41821	548 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	IES1	P43579	692 aa		5.03	□□□□□ -1.6
ATM1	YMR301C	KXD1	P53158	218 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms