RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeast

Gene VTI1, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTI1	YMR197C	GMH1	P36125	273 aa		3.17	□□□□□ -1.9
VTI1	YMR197C	YKR051W	P36142	418 aa		3.17	□□□□□ -1.9
VTI1	YMR197C	REC102	Q02721	264 aa		3.17	□□□□□ -1.9
VTI1	YMR197C	HMO1	Q03973	246 aa	Known RBP	3.17	□□□□□ -1.9
VTI1	YMR197C	IOC4	Q04213	475 aa		3.17	□□□□□ -1.9
VTI1	YMR197C	CLF1	Q12309	687 aa	Predicted RBP	3.17	□□□□□ -1.9
VTI1	YMR197C	ERR1	P0CX10	437 aa		3.16	□□□□□ -1.9
VTI1	YMR197C	ERR2	P0CX11	437 aa		3.16	□□□□□ -1.9
VTI1	YMR197C	STO1	P34160	861 aa	Known RBP	3.16	□□□□□ -1.9
VTI1	YMR197C	MAL11	P53048	616 aa		3.16	□□□□□ -1.9
VTI1	YMR197C	COX18	P53239	316 aa		3.16	□□□□□ -1.9
VTI1	YMR197C	SEG1	Q04279	960 aa		3.16	□□□□□ -1.9
VTI1	YMR197C	RPN7	Q06103	429 aa	Known RBP	3.16	□□□□□ -1.9
VTI1	YMR197C	ECM3	Q99252	613 aa		3.16	□□□□□ -1.9
VTI1	YMR197C	PEX1	P24004	1043 aa		3.15	□□□□□ -1.91
VTI1	YMR197C	NOP9	P47077	666 aa	Known RBP	3.15	□□□□□ -1.91
VTI1	YMR197C	YGR151C	P53287	111 aa		3.15	□□□□□ -1.91
VTI1	YMR197C	SNP1	Q00916	300 aa	Predicted RBP	3.15	□□□□□ -1.91
VTI1	YMR197C	NSE3	Q05541	303 aa		3.15	□□□□□ -1.91
VTI1	YMR197C	CDC9	P04819	755 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	ERG11	P10614	530 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	STE12	P13574	688 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
VTI1	YMR197C	RPA135	P22138	1203 aa	Known RBP	3.14	□□□□□ -1.91
VTI1	YMR197C	MIH1	P23748	554 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	KCC4	P25389	1037 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	YKR018C	P36114	725 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	YNL195C	P40168	261 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	GID8	P40208	455 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	CAF16	P43569	289 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	PCL10	P53124	433 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	SPC98	P53540	846 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	THI22	Q06490	572 aa		3.14	□□□□□ -1.91
VTI1	YMR197C	SLK19	Q08581	821 aa	Known RBP	3.14	□□□□□ -1.91
VTI1	YMR197C	ABF1	P14164	731 aa		3.13	□□□□□ -1.91
VTI1	YMR197C	BCS1	P32839	456 aa		3.13	□□□□□ -1.91
VTI1	YMR197C	HSL7	P38274	827 aa		3.13	□□□□□ -1.91
VTI1	YMR197C	BIT2	P38346	545 aa		3.13	□□□□□ -1.91
VTI1	YMR197C	KSP1	P38691	1029 aa	Known RBP	3.13	□□□□□ -1.91
VTI1	YMR197C	CHZ1	P40019	153 aa	Predicted RBP	3.13	□□□□□ -1.91
VTI1	YMR197C	GAT1	P43574	510 aa		3.13	□□□□□ -1.91
VTI1	YMR197C	ARP4	P80428	489 aa		3.13	□□□□□ -1.91
VTI1	YMR197C	FMP30	Q02883	468 aa		3.13	□□□□□ -1.91
VTI1	YMR197C	NHX1	Q04121	633 aa		3.13	□□□□□ -1.91
VTI1	YMR197C	DIA2	Q08496	732 aa	Predicted RBP	3.13	□□□□□ -1.91
VTI1	YMR197C	MDM12	Q92328	271 aa		3.13	□□□□□ -1.91
VTI1	YMR197C	YMC2	P38087	329 aa		3.12	□□□□□ -1.91
VTI1	YMR197C	DSS1	P39112	969 aa		3.12	□□□□□ -1.91
VTI1	YMR197C	MIT1	P40002	666 aa		3.12	□□□□□ -1.91
VTI1	YMR197C	PIG2	P40187	538 aa		3.12	□□□□□ -1.91
VTI1	YMR197C	RSC8	P43609	557 aa	Known RBP	3.12	□□□□□ -1.91
VTI1	YMR197C	LEE1	Q02799	301 aa	Known RBP	3.12	□□□□□ -1.91
VTI1	YMR197C	YDL086W	Q07505	273 aa		3.12	□□□□□ -1.91
VTI1	YMR197C	CHS5	Q12114	671 aa	Known RBP	3.12	□□□□□ -1.91
VTI1	YMR197C	YOR131C	Q12486	218 aa		3.12	□□□□□ -1.91
VTI1	YMR197C	CIT2	P08679	460 aa		3.11	□□□□□ -1.91
VTI1	YMR197C	RAD18	P10862	487 aa		3.11	□□□□□ -1.91
VTI1	YMR197C	NUP1	P20676	1076 aa		3.11	□□□□□ -1.91
VTI1	YMR197C	GSY1	P23337	708 aa		3.11	□□□□□ -1.91
VTI1	YMR197C	PRP28	P23394	588 aa		3.11	□□□□□ -1.91
VTI1	YMR197C	MEF1	P25039	761 aa		3.11	□□□□□ -1.91
VTI1	YMR197C	VBA3	P25594	458 aa		3.11	□□□□□ -1.91
VTI1	YMR197C	HOG1	P32485	435 aa		3.11	□□□□□ -1.91
VTI1	YMR197C	TIM23	P32897	222 aa		3.11	□□□□□ -1.91
VTI1	YMR197C	YHR097C	P38809	366 aa	Known RBP	3.11	□□□□□ -1.91
VTI1	YMR197C	BNA3	P47039	444 aa	Known RBP	3.11	□□□□□ -1.91
VTI1	YMR197C	BMS1	Q08965	1183 aa	Known RBP	3.11	□□□□□ -1.91
VTI1	YMR197C	PHO5	P00635	467 aa		3.1	□□□□□ -1.91
VTI1	YMR197C	PTP1	P25044	335 aa		3.1	□□□□□ -1.91
VTI1	YMR197C	SAT4	P25333	603 aa	Known RBP	3.1	□□□□□ -1.91
VTI1	YMR197C	UGP1	P32861	499 aa	Known RBP	3.1	□□□□□ -1.91
VTI1	YMR197C	APN2	P38207	520 aa		3.1	□□□□□ -1.91
VTI1	YMR197C	PMC1	P38929	1173 aa	Predicted RBP	3.1	□□□□□ -1.91
VTI1	YMR197C	XBP1	P40489	647 aa		3.1	□□□□□ -1.91
VTI1	YMR197C	SET2	P46995	733 aa	Known RBP	3.1	□□□□□ -1.91
VTI1	YMR197C	NET1	P47035	1189 aa		3.1	□□□□□ -1.91
VTI1	YMR197C	MPS3	P47069	682 aa		3.1	□□□□□ -1.91
VTI1	YMR197C	ASN1	P49089	572 aa	Known RBP	3.1	□□□□□ -1.91
VTI1	YMR197C	NMA2	P53204	395 aa		3.1	□□□□□ -1.91
VTI1	YMR197C	LAM4	P38800	1345 aa		3.1	□□□□□ -1.91
VTI1	YMR197C	PGK1	P00560	416 aa	Known RBP	3.09	□□□□□ -1.91
VTI1	YMR197C	ADE5,7	P07244	802 aa	Known RBP	3.09	□□□□□ -1.91
VTI1	YMR197C	SRD1	P09007	221 aa		3.09	□□□□□ -1.91
VTI1	YMR197C	FEN2	P25621	512 aa	Known RBP	3.09	□□□□□ -1.91
VTI1	YMR197C	YMC1	P32331	307 aa		3.09	□□□□□ -1.91
VTI1	YMR197C	SEC6	P32844	805 aa		3.09	□□□□□ -1.91
VTI1	YMR197C	CTP1	P38152	299 aa		3.09	□□□□□ -1.91
VTI1	YMR197C	DOT6	P40059	670 aa	Known RBP	3.09	□□□□□ -1.91
VTI1	YMR197C	LTP1	P40347	161 aa		3.09	□□□□□ -1.91
VTI1	YMR197C	PMT6	P42934	759 aa		3.09	□□□□□ -1.91
VTI1	YMR197C	NNF1	P47149	201 aa		3.09	□□□□□ -1.91
VTI1	YMR197C	RFX1	P48743	811 aa		3.09	□□□□□ -1.91
VTI1	YMR197C	MNN4	P36044	1178 aa		3.08	□□□□□ -1.92
VTI1	YMR197C	APL3	P38065	1025 aa		3.08	□□□□□ -1.92
VTI1	YMR197C	KHA1	P40309	873 aa		3.08	□□□□□ -1.92
VTI1	YMR197C	YIL077C	P40508	320 aa		3.08	□□□□□ -1.92
VTI1	YMR197C	TAX4	P47030	604 aa		3.08	□□□□□ -1.92
VTI1	YMR197C	BRE5	P53741	515 aa	Known RBP	3.08	□□□□□ -1.92
VTI1	YMR197C	YSH1	Q06224	779 aa	Predicted RBP	3.08	□□□□□ -1.92
VTI1	YMR197C	ULA1	Q12059	462 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms