RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W IES1P43579 692 aa4.75□□□□□ -1.65
CTK1YKL139W TEP1P53916 434 aa4.75□□□□□ -1.65
CTK1YKL139W MOT3P54785 490 aaKnown RBP4.75□□□□□ -1.65
CTK1YKL139W YML131WQ03102 365 aa4.75□□□□□ -1.65
CTK1YKL139W ROT1Q03691 256 aa4.75□□□□□ -1.65
CTK1YKL139W BRE1Q07457 700 aaKnown RBP4.75□□□□□ -1.65
CTK1YKL139W TRP3P00937 484 aa4.74□□□□□ -1.65
CTK1YKL139W DGR2P32330 852 aa4.74□□□□□ -1.65
CTK1YKL139W PET309P32522 965 aaPredicted RBP4.74□□□□□ -1.65
CTK1YKL139W STL1P39932 569 aa4.74□□□□□ -1.65
CTK1YKL139W ERR3P42222 437 aa4.74□□□□□ -1.65
CTK1YKL139W IRC5P43610 853 aa4.74□□□□□ -1.65
CTK1YKL139W MET12P46151 657 aa4.74□□□□□ -1.65
CTK1YKL139W YBP2P53169 641 aa4.74□□□□□ -1.65
CTK1YKL139W ASI2P53895 289 aa4.74□□□□□ -1.65
CTK1YKL139W HLR1Q04429 423 aa4.74□□□□□ -1.65
CTK1YKL139W ISA1Q07821 250 aaPredicted RBP4.74□□□□□ -1.65
CTK1YKL139W MSS4P38994 779 aa4.74□□□□□ -1.65
CTK1YKL139W EXG2P52911 562 aa4.74□□□□□ -1.65
CTK1YKL139W MTD1Q02046 320 aaKnown RBP4.74□□□□□ -1.65
CTK1YKL139W COG4Q06096 861 aa4.74□□□□□ -1.65
CTK1YKL139W YEL076C-AP0CX16 216 aa4.73□□□□□ -1.65
CTK1YKL139W YLR464WP0CX17 216 aa4.73□□□□□ -1.65
CTK1YKL139W PRP4P20053 465 aaKnown RBP4.73□□□□□ -1.65
CTK1YKL139W MSM1P22438 575 aa4.73□□□□□ -1.65
CTK1YKL139W MSH1P25846 959 aa4.73□□□□□ -1.65
CTK1YKL139W SEC21P32074 935 aaKnown RBP4.73□□□□□ -1.65
CTK1YKL139W MF(ALPHA)2P32435 120 aa4.73□□□□□ -1.65
CTK1YKL139W YEL076CP39971 216 aa4.73□□□□□ -1.65
CTK1YKL139W SCS2P40075 244 aaKnown RBP4.73□□□□□ -1.65
CTK1YKL139W CCT8P47079 568 aaKnown RBP4.73□□□□□ -1.65
CTK1YKL139W PRP31P49704 494 aaPredicted RBP4.73□□□□□ -1.65
CTK1YKL139W SGD1Q06132 899 aa4.73□□□□□ -1.65
CTK1YKL139W STP4Q07351 490 aa4.73□□□□□ -1.65
CTK1YKL139W VHS3Q08438 674 aa4.73□□□□□ -1.65
CTK1YKL139W PSF3Q12146 194 aa4.73□□□□□ -1.65
CTK1YKL139W YDL177CQ12257 170 aa4.73□□□□□ -1.65
CTK1YKL139W SWM1Q12379 170 aa4.73□□□□□ -1.65
CTK1YKL139W ARP7Q12406 477 aa4.73□□□□□ -1.65
CTK1YKL139W HIS5P07172 385 aa4.72□□□□□ -1.65
CTK1YKL139W TUB3P09734 445 aaKnown RBP4.72□□□□□ -1.65
CTK1YKL139W PYC1P11154 1178 aaKnown RBP4.72□□□□□ -1.65
CTK1YKL139W ADE2P21264 571 aaKnown RBP4.72□□□□□ -1.65
CTK1YKL139W SDS22P36047 338 aa4.72□□□□□ -1.65
CTK1YKL139W YKR073CP36153 106 aa4.72□□□□□ -1.65
CTK1YKL139W GID8P40208 455 aa4.72□□□□□ -1.65
CTK1YKL139W VPS27P40343 622 aaKnown RBP4.72□□□□□ -1.65
CTK1YKL139W PKH1Q03407 766 aa4.72□□□□□ -1.65
CTK1YKL139W RCR2Q03446 210 aaKnown RBP4.72□□□□□ -1.65
CTK1YKL139W CIA1Q05583 330 aa4.72□□□□□ -1.65
CTK1YKL139W YOR352WQ08816 343 aa4.72□□□□□ -1.65
CTK1YKL139W YLR415CO13578 112 aa4.71□□□□□ -1.66
CTK1YKL139W RPP2AP05319 106 aaKnown RBP4.71□□□□□ -1.66
CTK1YKL139W ACO1P19414 778 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
CTK1YKL139W TGL1P34163 548 aa4.71□□□□□ -1.66
CTK1YKL139W LAM1P38851 1228 aa4.71□□□□□ -1.66
CTK1YKL139W IML2P47031 731 aa4.71□□□□□ -1.66
CTK1YKL139W ENP2P48234 707 aaKnown RBP4.71□□□□□ -1.66
CTK1YKL139W PUS4P48567 403 aaKnown RBP4.71□□□□□ -1.66
CTK1YKL139W NCS6P53088 359 aa4.71□□□□□ -1.66
CTK1YKL139W GTR1Q00582 310 aa4.71□□□□□ -1.66
CTK1YKL139W ARG5,6Q01217 863 aa4.71□□□□□ -1.66
CTK1YKL139W SSP2Q08646 371 aa4.71□□□□□ -1.66
CTK1YKL139W HMI1Q12039 706 aa4.71□□□□□ -1.66
CTK1YKL139W ADH4P10127 382 aa4.7□□□□□ -1.66
CTK1YKL139W FRS1P15624 595 aaKnown RBP4.7□□□□□ -1.66
CTK1YKL139W IME1P21190 360 aa4.7□□□□□ -1.66
CTK1YKL139W EMC1P25574 760 aa4.7□□□□□ -1.66
CTK1YKL139W NGG1P32494 702 aa4.7□□□□□ -1.66
CTK1YKL139W PET127P32606 800 aa4.7□□□□□ -1.66
CTK1YKL139W BEM3P32873 1128 aa4.7□□□□□ -1.66
CTK1YKL139W LRG1P35688 1017 aa4.7□□□□□ -1.66
CTK1YKL139W TOS1P38288 455 aa4.7□□□□□ -1.66
CTK1YKL139W CHA4P43634 648 aa4.7□□□□□ -1.66
CTK1YKL139W TAF1P46677 1066 aa4.7□□□□□ -1.66
CTK1YKL139W MAD3P47074 515 aa4.7□□□□□ -1.66
CTK1YKL139W BLS1Q06071 122 aa4.7□□□□□ -1.66
CTK1YKL139W MED7Q08278 222 aa4.7□□□□□ -1.66
CTK1YKL139W SGO1Q08490 590 aa4.7□□□□□ -1.66
CTK1YKL139W MCH5Q08777 521 aa4.7□□□□□ -1.66
CTK1YKL139W GPB1Q08886 897 aa4.7□□□□□ -1.66
CTK1YKL139W RTK1Q12100 620 aaPredicted RBP4.7□□□□□ -1.66
CTK1YKL139W KCS1Q12494 1050 aa4.7□□□□□ -1.66
CTK1YKL139W CDC6P09119 513 aa4.7□□□□□ -1.66
CTK1YKL139W RPN12P32496 274 aa4.7□□□□□ -1.66
CTK1YKL139W APL2P36000 726 aaPredicted RBP4.7□□□□□ -1.66
CTK1YKL139W SHM2P37291 469 aaKnown RBP4.7□□□□□ -1.66
CTK1YKL139W APM3P38153 483 aa4.7□□□□□ -1.66
CTK1YKL139W SIC1P38634 284 aa4.7□□□□□ -1.66
CTK1YKL139W SWD1P39706 426 aa4.7□□□□□ -1.66
CTK1YKL139W SPC72P39723 622 aa4.7□□□□□ -1.66
CTK1YKL139W YNL195CP40168 261 aa4.7□□□□□ -1.66
CTK1YKL139W UBA2P52488 636 aa4.7□□□□□ -1.66
CTK1YKL139W COX18P53239 316 aa4.7□□□□□ -1.66
CTK1YKL139W SNO2P53823 222 aa4.7□□□□□ -1.66
CTK1YKL139W TRS130Q03660 1102 aa4.7□□□□□ -1.66
CTK1YKL139W VAS1P07806 1104 aaKnown RBP4.69□□□□□ -1.66
CTK1YKL139W YBR259WP38338 688 aa4.69□□□□□ -1.66
CTK1YKL139W YHR033WP38690 423 aa4.69□□□□□ -1.66
CTK1YKL139W YHR112CP38716 378 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms