RNA–Protein interactions for RNA: YGR198W

YPP1, Transcript of Cargo-transport protein involved in endocytosis, yeast

Gene YPP1, Length 2,454 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPP1	YGR198W	COQ6	P53318	479 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	SUN4	P53616	420 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	YPR109W	Q06104	294 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	YPL272C	Q08984	517 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	HIS4	P00815	799 aa	Known RBP	3.01	□□□□□ -1.93
YPP1	YGR198W	PRI2	P20457	528 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	LTP1	P40347	161 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	RRN7	P40992	514 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	VPS70	P47161	811 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	YGL081W	P53156	320 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	SWS2	P53937	143 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	ESC2	Q06340	456 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	SPN1	Q06505	410 aa	Predicted RBP	3.01	□□□□□ -1.93
YPP1	YGR198W	IES4	Q08561	116 aa		3.01	□□□□□ -1.93
YPP1	YGR198W	CLN3	P13365	580 aa		3	□□□□□ -1.93
YPP1	YGR198W	VPS3	P23643	1011 aa		3	□□□□□ -1.93
YPP1	YGR198W	TIF34	P40217	347 aa	Known RBP	3	□□□□□ -1.93
YPP1	YGR198W	VTC2	P43585	828 aa		3	□□□□□ -1.93
YPP1	YGR198W	YNL146W	P53906	100 aa		3	□□□□□ -1.93
YPP1	YGR198W	CEG1	Q01159	459 aa	Predicted RBP	3	□□□□□ -1.93
YPP1	YGR198W	TRM82	Q03774	444 aa		3	□□□□□ -1.93
YPP1	YGR198W	BNA5	Q05979	453 aa		3	□□□□□ -1.93
YPP1	YGR198W	HRT3	Q12347	344 aa		3	□□□□□ -1.93
YPP1	YGR198W	TPK1	P06244	397 aa		3	□□□□□ -1.93
YPP1	YGR198W	RNR3	P21672	869 aa	Known RBP	3	□□□□□ -1.93
YPP1	YGR198W	BEM1	P29366	551 aa		3	□□□□□ -1.93
YPP1	YGR198W	SPT16	P32558	1035 aa	Known RBP	3	□□□□□ -1.93
YPP1	YGR198W	BRN1	P38170	754 aa		3	□□□□□ -1.93
YPP1	YGR198W	FYV10	P40492	516 aa		3	□□□□□ -1.93
YPP1	YGR198W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
YPP1	YGR198W	MFM1	Q02783	413 aa		3	□□□□□ -1.93
YPP1	YGR198W	TFC6	Q06339	672 aa		3	□□□□□ -1.93
YPP1	YGR198W	CLP1	Q08685	445 aa	Predicted RBP	3	□□□□□ -1.93
YPP1	YGR198W	TAF10	Q12030	206 aa		3	□□□□□ -1.93
YPP1	YGR198W	MET32	Q12041	191 aa		3	□□□□□ -1.93
YPP1	YGR198W	KTR1	P27810	393 aa	Known RBP	2.99	□□□□□ -1.93
YPP1	YGR198W	COT1	P32798	439 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	YHR054C	P38780	354 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	ALR2	P43553	858 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	NPA3	P47122	385 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	GIS4	Q04233	774 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	BRE1	Q07457	700 aa	Known RBP	2.99	□□□□□ -1.93
YPP1	YGR198W	RPN8	Q08723	338 aa	Known RBP	2.99	□□□□□ -1.93
YPP1	YGR198W	OSW2	Q12202	724 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	FRE7	Q12333	620 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	LDB16	P25587	256 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	PYC2	P32327	1180 aa	Known RBP	2.99	□□□□□ -1.93
YPP1	YGR198W	TRM2	P33753	639 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	SIF2	P38262	535 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	RTT102	P53330	157 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
YPP1	YGR198W	TIF35	Q04067	274 aa	Known RBP	2.99	□□□□□ -1.93
YPP1	YGR198W	VID22	Q05934	901 aa		2.99	□□□□□ -1.93
YPP1	YGR198W	CDC4	P07834	779 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	RPL4A	P10664	362 aa	Known RBP	2.98	□□□□□ -1.93
YPP1	YGR198W	MET22	P32179	357 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	STE13	P33894	931 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	RER2	P35196	286 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	KDX1	P36005	433 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	VID24	P38263	362 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	DUN1	P39009	513 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	RPL4B	P49626	362 aa	Known RBP	2.98	□□□□□ -1.93
YPP1	YGR198W	SHE10	P53075	577 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	PEX14	P53112	341 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	TPO2	P53283	614 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	YNL092W	P53934	400 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
YPP1	YGR198W	RKM5	Q12367	367 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	ZPS1	Q12512	249 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	SRD1	P09007	221 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	MMS4	P38257	691 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	STB4	P50104	949 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	CAF130	P53280	1122 aa	Predicted RBP	2.98	□□□□□ -1.93
YPP1	YGR198W	RPN4	Q03465	531 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	YFT2	Q06676	274 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	NOC3	Q07896	663 aa	Predicted RBP	2.98	□□□□□ -1.93
YPP1	YGR198W	CTF3	Q12748	733 aa		2.98	□□□□□ -1.93
YPP1	YGR198W	ABF1	P14164	731 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	SUI2	P20459	304 aa	Known RBP	2.97	□□□□□ -1.93
YPP1	YGR198W	SCJ1	P25303	377 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	GAR1	P28007	205 aa	Known RBP	2.97	□□□□□ -1.93
YPP1	YGR198W	PIM1	P36775	1133 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	GAA1	P39012	614 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	MRPS35	P53292	345 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	TRS130	Q03660	1102 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	HED1	Q03937	162 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	ADY4	Q05955	493 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	SAM4	Q08985	325 aa	Known RBP	2.97	□□□□□ -1.93
YPP1	YGR198W	SRO7	Q12038	1033 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	SKM1	Q12469	655 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	YOR111W	Q99210	232 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	RAD3	P06839	778 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	TKL2	P33315	681 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	DSN1	P40568	576 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	NUP42	P49686	430 aa	Known RBP	2.97	□□□□□ -1.93
YPP1	YGR198W	PYK2	P52489	506 aa	Known RBP	2.97	□□□□□ -1.93
YPP1	YGR198W	PEX13	P80667	386 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	CWC21	Q03375	135 aa	Known RBP	2.97	□□□□□ -1.93
YPP1	YGR198W	YMR018W	Q04364	514 aa		2.97	□□□□□ -1.93
YPP1	YGR198W	YML096W	Q04489	525 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 74.5 ms