RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W ABZ2Q03266 374 aa6.14□□□□□ -1.43
SKN1YGR143W ISW2Q08773 1120 aa6.14□□□□□ -1.43
SKN1YGR143W OCA6Q12454 224 aa6.14□□□□□ -1.43
SKN1YGR143W DUR1,2P32528 1835 aaKnown RBP6.14□□□□□ -1.43
SKN1YGR143W PFK2P16862 959 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
SKN1YGR143W RDS1P25611 832 aa6.14□□□□□ -1.43
SKN1YGR143W OXP1P28273 1286 aa6.14□□□□□ -1.43
SKN1YGR143W ASF2P32448 525 aaPredicted RBP6.14□□□□□ -1.43
SKN1YGR143W ALG14P38242 237 aa6.14□□□□□ -1.43
SKN1YGR143W FES1P38260 290 aa6.14□□□□□ -1.43
SKN1YGR143W BRE2P43132 505 aa6.14□□□□□ -1.43
SKN1YGR143W ZIP2P53061 704 aa6.14□□□□□ -1.43
SKN1YGR143W MRM2P53123 320 aa6.14□□□□□ -1.43
SKN1YGR143W SWP1Q02795 286 aa6.14□□□□□ -1.43
SKN1YGR143W YPL109CQ02981 657 aa6.14□□□□□ -1.43
SKN1YGR143W ICL2Q12031 575 aa6.14□□□□□ -1.43
SKN1YGR143W RED1P14291 827 aa6.13□□□□□ -1.43
SKN1YGR143W HSP60P19882 572 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W TRX2P22803 104 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W ALG3P38179 458 aa6.13□□□□□ -1.43
SKN1YGR143W GLO3P38682 493 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W LSM12P38828 187 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W HXT6P39003 570 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W HXT7P39004 570 aa6.13□□□□□ -1.43
SKN1YGR143W CCT4P39078 528 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W RCY1P39531 840 aa6.13□□□□□ -1.43
SKN1YGR143W SEC28P40509 296 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W AGE2P40529 298 aa6.13□□□□□ -1.43
SKN1YGR143W SNL1P40548 159 aa6.13□□□□□ -1.43
SKN1YGR143W FAR7P43592 221 aa6.13□□□□□ -1.43
SKN1YGR143W TRS85P46944 698 aa6.13□□□□□ -1.43
SKN1YGR143W YJR079WP47126 109 aa6.13□□□□□ -1.43
SKN1YGR143W PCL10P53124 433 aa6.13□□□□□ -1.43
SKN1YGR143W SHE9Q04172 456 aa6.13□□□□□ -1.43
SKN1YGR143W SGD1Q06132 899 aa6.13□□□□□ -1.43
SKN1YGR143W DXO1Q06349 442 aa6.13□□□□□ -1.43
SKN1YGR143W TMA16Q08687 178 aa6.13□□□□□ -1.43
SKN1YGR143W GAL1P04385 528 aa6.13□□□□□ -1.43
SKN1YGR143W YMR085WP0CF18 432 aa6.13□□□□□ -1.43
SKN1YGR143W BIK1P11709 440 aa6.13□□□□□ -1.43
SKN1YGR143W CKI1P20485 582 aa6.13□□□□□ -1.43
SKN1YGR143W PWP1P21304 576 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W VPS3P23643 1011 aa6.13□□□□□ -1.43
SKN1YGR143W TEF4P36008 412 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W VPS21P36017 210 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W STP2P38704 541 aa6.13□□□□□ -1.43
SKN1YGR143W NOP16P40007 231 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W ULP2P40537 1034 aaPredicted RBP6.13□□□□□ -1.43
SKN1YGR143W SAP185P40856 1058 aa6.13□□□□□ -1.43
SKN1YGR143W FET4P40988 552 aa6.13□□□□□ -1.43
SKN1YGR143W RET2P43621 546 aa6.13□□□□□ -1.43
SKN1YGR143W PAN2P53010 1115 aaPredicted RBP6.13□□□□□ -1.43
SKN1YGR143W SPC105P53148 917 aa6.13□□□□□ -1.43
SKN1YGR143W CWC25P53854 179 aaKnown RBP6.13□□□□□ -1.43
SKN1YGR143W PTA1Q01329 785 aaPredicted RBP6.13□□□□□ -1.43
SKN1YGR143W HER2Q03557 464 aa6.13□□□□□ -1.43
SKN1YGR143W USA1Q03714 838 aa6.13□□□□□ -1.43
SKN1YGR143W TRS120Q04183 1289 aa6.13□□□□□ -1.43
SKN1YGR143W RTP1Q12751 981 aa6.13□□□□□ -1.43
SKN1YGR143W FLO11P08640 1367 aa6.12□□□□□ -1.43
SKN1YGR143W ADE8P04161 214 aa6.12□□□□□ -1.43
SKN1YGR143W RPS19AP07280 144 aaKnown RBP6.12□□□□□ -1.43
SKN1YGR143W RPS19BP07281 144 aaPredicted RBP6.12□□□□□ -1.43
SKN1YGR143W MPH2P0CD99 609 aa6.12□□□□□ -1.43
SKN1YGR143W GPA2P10823 449 aa6.12□□□□□ -1.43
SKN1YGR143W MSS116P15424 664 aaKnown RBP6.12□□□□□ -1.43
SKN1YGR143W DBP3P20447 523 aaKnown RBP6.12□□□□□ -1.43
SKN1YGR143W URE2P23202 354 aaKnown RBP6.12□□□□□ -1.43
SKN1YGR143W MEF1P25039 761 aa6.12□□□□□ -1.43
SKN1YGR143W VPH1P32563 840 aaKnown RBP6.12□□□□□ -1.43
SKN1YGR143W VMA8P32610 256 aaKnown RBP6.12□□□□□ -1.43
SKN1YGR143W STV1P37296 890 aa6.12□□□□□ -1.43
SKN1YGR143W YIL077CP40508 320 aa6.12□□□□□ -1.43
SKN1YGR143W MKT1P40850 830 aaKnown RBP6.12□□□□□ -1.43
SKN1YGR143W GSM1P42950 618 aa6.12□□□□□ -1.43
SKN1YGR143W VMA10P48836 114 aaKnown RBP6.12□□□□□ -1.43
SKN1YGR143W ERP6P53198 216 aa6.12□□□□□ -1.43
SKN1YGR143W RNH70P53331 553 aa6.12□□□□□ -1.43
SKN1YGR143W GOR1P53839 350 aa6.12□□□□□ -1.43
SKN1YGR143W VPS16Q03308 798 aa6.12□□□□□ -1.43
SKN1YGR143W OYE2Q03558 400 aaKnown RBP6.12□□□□□ -1.43
SKN1YGR143W TOS4Q06266 489 aa6.12□□□□□ -1.43
SKN1YGR143W MCM16Q12262 181 aa6.12□□□□□ -1.43
SKN1YGR143W RPS9BP05755 195 aaKnown RBP6.11□□□□□ -1.43
SKN1YGR143W ATE1P16639 503 aa6.11□□□□□ -1.43
SKN1YGR143W ADE2P21264 571 aaKnown RBP6.11□□□□□ -1.43
SKN1YGR143W TYE7P33122 291 aaPredicted RBP6.11□□□□□ -1.43
SKN1YGR143W GRX7P38068 203 aa6.11□□□□□ -1.43
SKN1YGR143W REV7P38927 245 aa6.11□□□□□ -1.43
SKN1YGR143W STM1P39015 273 aaKnown RBP6.11□□□□□ -1.43
SKN1YGR143W DSS1P39112 969 aa6.11□□□□□ -1.43
SKN1YGR143W JLP2P40206 208 aa6.11□□□□□ -1.43
SKN1YGR143W HYR1P40581 163 aaKnown RBP6.11□□□□□ -1.43
SKN1YGR143W MDJ2P42834 146 aa6.11□□□□□ -1.43
SKN1YGR143W YJR039WP47107 1121 aa6.11□□□□□ -1.43
SKN1YGR143W TRM44Q02648 567 aaKnown RBP6.11□□□□□ -1.43
SKN1YGR143W SEC10Q06245 871 aa6.11□□□□□ -1.43
SKN1YGR143W EAF1Q06337 982 aa6.11□□□□□ -1.43
SKN1YGR143W MAM3Q12296 706 aa6.11□□□□□ -1.43
SKN1YGR143W ARP6Q12509 438 aa6.11□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms