RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	YLR415C	O13578	112 aa		6.48	□□□□□ -1.37
RPN5	YDL147W	EMC1	P25574	760 aa		6.48	□□□□□ -1.37
RPN5	YDL147W	YKL222C	P35995	705 aa		6.48	□□□□□ -1.37
RPN5	YDL147W	SDS22	P36047	338 aa		6.48	□□□□□ -1.37
RPN5	YDL147W	ASK10	P48361	1146 aa		6.48	□□□□□ -1.37
RPN5	YDL147W	NCS6	P53088	359 aa		6.48	□□□□□ -1.37
RPN5	YDL147W	REC102	Q02721	264 aa		6.48	□□□□□ -1.37
RPN5	YDL147W	NGL1	Q08213	363 aa	Known RBP	6.48	□□□□□ -1.37
RPN5	YDL147W	HOP1	P20050	605 aa		6.47	□□□□□ -1.37
RPN5	YDL147W	IMG2	P25642	146 aa	Predicted RBP	6.47	□□□□□ -1.37
RPN5	YDL147W	KTR4	P38131	464 aa		6.47	□□□□□ -1.37
RPN5	YDL147W	MSS4	P38994	779 aa		6.47	□□□□□ -1.37
RPN5	YDL147W	VPS27	P40343	622 aa	Known RBP	6.47	□□□□□ -1.37
RPN5	YDL147W	YIL092W	P40497	633 aa		6.47	□□□□□ -1.37
RPN5	YDL147W	MRPL22	P53881	309 aa		6.47	□□□□□ -1.37
RPN5	YDL147W	PEX19	Q07418	342 aa		6.47	□□□□□ -1.37
RPN5	YDL147W	HMI1	Q12039	706 aa		6.47	□□□□□ -1.37
RPN5	YDL147W	YDL177C	Q12257	170 aa		6.47	□□□□□ -1.37
RPN5	YDL147W	YOL114C	Q12322	202 aa		6.47	□□□□□ -1.37
RPN5	YDL147W	MSH1	P25846	959 aa		6.46	□□□□□ -1.38
RPN5	YDL147W	SEC21	P32074	935 aa	Known RBP	6.46	□□□□□ -1.38
RPN5	YDL147W	ACA1	P39970	489 aa		6.46	□□□□□ -1.38
RPN5	YDL147W	QRI7	P43122	407 aa		6.46	□□□□□ -1.38
RPN5	YDL147W	ACK1	Q07622	623 aa	Predicted RBP	6.46	□□□□□ -1.38
RPN5	YDL147W	NOP12	Q08208	459 aa	Known RBP	6.46	□□□□□ -1.38
RPN5	YDL147W	SGO1	Q08490	590 aa		6.46	□□□□□ -1.38
RPN5	YDL147W	NUR1	Q12066	484 aa		6.46	□□□□□ -1.38
RPN5	YDL147W	GPR1	Q12361	961 aa		6.46	□□□□□ -1.38
RPN5	YDL147W	NKP1	Q12493	238 aa		6.46	□□□□□ -1.38
RPN5	YDL147W	PYC1	P11154	1178 aa	Known RBP	6.45	□□□□□ -1.38
RPN5	YDL147W	PET127	P32606	800 aa		6.45	□□□□□ -1.38
RPN5	YDL147W	POL12	P38121	705 aa	Predicted RBP	6.45	□□□□□ -1.38
RPN5	YDL147W	STL1	P39932	569 aa		6.45	□□□□□ -1.38
RPN5	YDL147W	VPS62	P53285	467 aa		6.45	□□□□□ -1.38
RPN5	YDL147W	ARG5,6	Q01217	863 aa		6.45	□□□□□ -1.38
RPN5	YDL147W	GCN5	Q03330	439 aa		6.45	□□□□□ -1.38
RPN5	YDL147W	DUS4	Q06063	367 aa		6.45	□□□□□ -1.38
RPN5	YDL147W	OMS1	Q06668	471 aa		6.45	□□□□□ -1.38
RPN5	YDL147W	MCM21	Q06675	368 aa		6.45	□□□□□ -1.38
RPN5	YDL147W	MSS18	P08593	268 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	CDC26	P14724	124 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	ADE2	P21264	571 aa	Known RBP	6.44	□□□□□ -1.38
RPN5	YDL147W	PHO3	P24031	467 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	DBF20	P32328	564 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	HXT4	P32467	576 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	LRG1	P35688	1017 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	APL2	P36000	726 aa	Predicted RBP	6.44	□□□□□ -1.38
RPN5	YDL147W	GID8	P40208	455 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	IES1	P43579	692 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	COX18	P53239	316 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	TEP1	P53916	434 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	HIM1	Q06674	414 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	NPC2	Q12408	173 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	DFG16	Q99234	619 aa		6.44	□□□□□ -1.38
RPN5	YDL147W	TUB3	P09734	445 aa	Known RBP	6.43	□□□□□ -1.38
RPN5	YDL147W	YEL076C-A	P0CX16	216 aa		6.43	□□□□□ -1.38
RPN5	YDL147W	YLR464W	P0CX17	216 aa		6.43	□□□□□ -1.38
RPN5	YDL147W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	6.43	□□□□□ -1.38	not detected
RPN5	YDL147W	PET309	P32522	965 aa	Predicted RBP	6.43	□□□□□ -1.38
RPN5	YDL147W	ECM1	P39715	212 aa		6.43	□□□□□ -1.38
RPN5	YDL147W	YEL076C	P39971	216 aa		6.43	□□□□□ -1.38
RPN5	YDL147W	SAP185	P40856	1058 aa		6.43	□□□□□ -1.38
RPN5	YDL147W	IRC5	P43610	853 aa		6.43	□□□□□ -1.38
RPN5	YDL147W	CTH1	P47976	325 aa		6.43	□□□□□ -1.38
RPN5	YDL147W	NRG1	Q03125	231 aa		6.43	□□□□□ -1.38
RPN5	YDL147W	TMA64	Q04600	565 aa	Known RBP	6.43	□□□□□ -1.38
RPN5	YDL147W	YPS7	Q06325	596 aa		6.43	□□□□□ -1.38
RPN5	YDL147W	PSF3	Q12146	194 aa		6.43	□□□□□ -1.38
RPN5	YDL147W	TRM11	Q12463	433 aa		6.43	□□□□□ -1.38
RPN5	YDL147W	FRS1	P15624	595 aa	Known RBP	6.42	□□□□□ -1.38
RPN5	YDL147W	CAD1	P24813	409 aa	Known RBP	6.42	□□□□□ -1.38
RPN5	YDL147W	MF(ALPHA)2	P32435	120 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	OMA1	P36163	345 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	TAF5	P38129	798 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	SIC1	P38634	284 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	RPP1	P38786	293 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	PLB1	P39105	664 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	EAF5	P39995	279 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	PXA1	P41909	870 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	SPT20	P50875	604 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	CEG1	Q01159	459 aa	Predicted RBP	6.42	□□□□□ -1.38
RPN5	YDL147W	YAP6	Q03935	383 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	PPN1	Q04119	674 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	VBA4	Q04602	768 aa	Known RBP	6.42	□□□□□ -1.38
RPN5	YDL147W	ARP7	Q12406	477 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	KCS1	Q12494	1050 aa		6.42	□□□□□ -1.38
RPN5	YDL147W	ERG20	P08524	352 aa	Known RBP	6.41	□□□□□ -1.38
RPN5	YDL147W	CDC6	P09119	513 aa		6.41	□□□□□ -1.38
RPN5	YDL147W	APA1	P16550	321 aa	Known RBP	6.41	□□□□□ -1.38
RPN5	YDL147W	SEC18	P18759	758 aa	Known RBP	6.41	□□□□□ -1.38
RPN5	YDL147W	PRP4	P20053	465 aa	Known RBP	6.41	□□□□□ -1.38
RPN5	YDL147W	PRP22	P24384	1145 aa	Known RBP	6.41	□□□□□ -1.38
RPN5	YDL147W	TGL1	P34163	548 aa		6.41	□□□□□ -1.38
RPN5	YDL147W	SSP120	P39931	234 aa	Known RBP	6.41	□□□□□ -1.38
RPN5	YDL147W	ECL1	P48235	211 aa		6.41	□□□□□ -1.38
RPN5	YDL147W	MTD1	Q02046	320 aa	Known RBP	6.41	□□□□□ -1.38
RPN5	YDL147W	NSE5	Q03718	556 aa		6.41	□□□□□ -1.38
RPN5	YDL147W	GAD1	Q04792	585 aa		6.41	□□□□□ -1.38
RPN5	YDL147W	SEC15	P22224	910 aa		6.4	□□□□□ -1.39
RPN5	YDL147W	CDC20	P26309	610 aa		6.4	□□□□□ -1.39

Retrieved 100 of 5,963 RNA–protein pairs in 120.2 ms