RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W CLU1Q03690 1277 aaKnown RBP2.52□□□□□ -2.01
UBP1YDL122W TDA6Q06466 467 aa2.52□□□□□ -2.01
UBP1YDL122W UTP4Q06679 776 aaKnown RBP2.52□□□□□ -2.01
UBP1YDL122W SEC16P48415 2195 aaKnown RBP2.52□□□□□ -2.01
UBP1YDL122W RAD50P12753 1312 aa2.52□□□□□ -2.01
UBP1YDL122W SSB1P11484 613 aaKnown RBP2.52□□□□□ -2.01
UBP1YDL122W PDC5P16467 563 aaKnown RBP2.52□□□□□ -2.01
UBP1YDL122W RGP1P16664 663 aa2.52□□□□□ -2.01
UBP1YDL122W DAL82P21705 255 aa2.52□□□□□ -2.01
UBP1YDL122W PDE1P22434 369 aa2.52□□□□□ -2.01
UBP1YDL122W SAP190P36123 1033 aa2.52□□□□□ -2.01
UBP1YDL122W PIM1P36775 1133 aa2.52□□□□□ -2.01
UBP1YDL122W TIF5P38431 405 aaKnown RBP2.52□□□□□ -2.01
UBP1YDL122W ERV46P39727 415 aa2.52□□□□□ -2.01
UBP1YDL122W UBP5P39944 805 aa2.52□□□□□ -2.01
UBP1YDL122W SSB2P40150 613 aaKnown RBP2.52□□□□□ -2.01
UBP1YDL122W YNL011CP53980 444 aa2.52□□□□□ -2.01
UBP1YDL122W YMR187CQ03236 431 aa2.52□□□□□ -2.01
UBP1YDL122W TY1A-DR2Q03964 440 aaKnown RBP2.52□□□□□ -2.01
UBP1YDL122W YDR341CQ05506 607 aaKnown RBP2.52□□□□□ -2.01
UBP1YDL122W YDR061WQ12298 539 aa2.52□□□□□ -2.01
UBP1YDL122W YGR161W-CQ3E744 92 aa2.52□□□□□ -2.01
UBP1YDL122W CYC8P14922 966 aa2.51□□□□□ -2.01
UBP1YDL122W SIR1P21691 654 aa2.51□□□□□ -2.01
UBP1YDL122W KIP1P28742 1111 aa2.51□□□□□ -2.01
UBP1YDL122W EFT1P32324 842 aaKnown RBP2.51□□□□□ -2.01
UBP1YDL122W UGA4P32837 571 aa2.51□□□□□ -2.01
UBP1YDL122W GDH3P39708 457 aa2.51□□□□□ -2.01
UBP1YDL122W DOT6P40059 670 aaKnown RBP2.51□□□□□ -2.01
UBP1YDL122W SUT1P53032 299 aaKnown RBP2.51□□□□□ -2.01
UBP1YDL122W FOL1P53848 824 aa2.51□□□□□ -2.01
UBP1YDL122W YNL193WP53870 558 aa2.51□□□□□ -2.01
UBP1YDL122W YNL165WP53891 406 aa2.51□□□□□ -2.01
UBP1YDL122W CDC55Q00362 526 aa2.51□□□□□ -2.01
UBP1YDL122W FMP25Q08023 583 aa2.51□□□□□ -2.01
UBP1YDL122W YPL272CQ08984 517 aa2.51□□□□□ -2.01
UBP1YDL122W MET6P05694 767 aaKnown RBP2.51□□□□□ -2.01
UBP1YDL122W WHI2P12611 486 aa2.51□□□□□ -2.01
UBP1YDL122W MTF1P14908 341 aaKnown RBP2.51□□□□□ -2.01
UBP1YDL122W SWE1P32944 819 aa2.51□□□□□ -2.01
UBP1YDL122W CSE2P33308 149 aa2.51□□□□□ -2.01
UBP1YDL122W CIC1P38779 376 aaKnown RBP2.51□□□□□ -2.01
UBP1YDL122W MNN1P39106 762 aa2.51□□□□□ -2.01
UBP1YDL122W IES1P43579 692 aa2.51□□□□□ -2.01
UBP1YDL122W MTO1P53070 669 aa2.51□□□□□ -2.01
UBP1YDL122W YGL081WP53156 320 aa2.51□□□□□ -2.01
UBP1YDL122W NRM1P53718 249 aa2.51□□□□□ -2.01
UBP1YDL122W SLG1P54867 378 aa2.51□□□□□ -2.01
UBP1YDL122W BRE1Q07457 700 aaKnown RBP2.51□□□□□ -2.01
UBP1YDL122W CIT1P00890 479 aa2.5□□□□□ -2.01
UBP1YDL122W DBP2P24783 546 aaKnown RBP2.5□□□□□ -2.01
UBP1YDL122W PRD1P25375 712 aa2.5□□□□□ -2.01
UBP1YDL122W MLF3P32047 452 aa2.5□□□□□ -2.01
UBP1YDL122W SCD5P34758 872 aa2.5□□□□□ -2.01
UBP1YDL122W BOI2P39969 1040 aa2.5□□□□□ -2.01
UBP1YDL122W RMD8P43620 662 aa2.5□□□□□ -2.01
UBP1YDL122W IRC8P47046 822 aa2.5□□□□□ -2.01
UBP1YDL122W SKP1P52286 194 aa2.5□□□□□ -2.01
UBP1YDL122W SRT1Q03175 343 aa2.5□□□□□ -2.01
UBP1YDL122W PDS5Q04264 1277 aa2.5□□□□□ -2.01
UBP1YDL122W UTP14Q04500 899 aaKnown RBP2.5□□□□□ -2.01
UBP1YDL122W MCP2Q06567 569 aa2.5□□□□□ -2.01
UBP1YDL122W NOC3Q07896 663 aaPredicted RBP2.5□□□□□ -2.01
UBP1YDL122W Q0182Q9ZZW1 134 aa2.5□□□□□ -2.01
UBP1YDL122W BRF1P29056 596 aa2.5□□□□□ -2.01
UBP1YDL122W CCR4P31384 837 aaKnown RBP2.5□□□□□ -2.01
UBP1YDL122W IMP2'P32351 346 aa2.5□□□□□ -2.01
UBP1YDL122W NAB2P32505 525 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
UBP1YDL122W SMC1P32908 1225 aa2.5□□□□□ -2.01
UBP1YDL122W MRPL40P36534 297 aa2.5□□□□□ -2.01
UBP1YDL122W FMS1P50264 508 aa2.5□□□□□ -2.01
UBP1YDL122W DOT1Q04089 582 aaKnown RBP2.5□□□□□ -2.01
UBP1YDL122W MRD1Q06106 887 aaKnown RBP2.5□□□□□ -2.01
UBP1YDL122W YOR022CQ12204 715 aa2.5□□□□□ -2.01
UBP1YDL122W HXK1P04806 485 aaKnown RBP2.49□□□□□ -2.01
UBP1YDL122W SES1P07284 462 aaKnown RBP2.49□□□□□ -2.01
UBP1YDL122W NUC1P08466 329 aa2.49□□□□□ -2.01
UBP1YDL122W YHL008CP38750 627 aa2.49□□□□□ -2.01
UBP1YDL122W YJL070CP40361 888 aa2.49□□□□□ -2.01
UBP1YDL122W NUP82P40368 713 aa2.49□□□□□ -2.01
UBP1YDL122W TPM2P40414 161 aa2.49□□□□□ -2.01
UBP1YDL122W BIR1P47134 954 aa2.49□□□□□ -2.01
UBP1YDL122W ENT3P47160 408 aa2.49□□□□□ -2.01
UBP1YDL122W YJR142WP47173 342 aa2.49□□□□□ -2.01
UBP1YDL122W NAN1Q02931 896 aaKnown RBP2.49□□□□□ -2.01
UBP1YDL122W BSC2Q05611 235 aa2.49□□□□□ -2.01
UBP1YDL122W ENT2Q05785 613 aa2.49□□□□□ -2.01
UBP1YDL122W VID22Q05934 901 aa2.49□□□□□ -2.01
UBP1YDL122W COX3P00420 269 aa2.49□□□□□ -2.01
UBP1YDL122W HIS4P00815 799 aaKnown RBP2.49□□□□□ -2.01
UBP1YDL122W MRPL33P20084 86 aa2.49□□□□□ -2.01
UBP1YDL122W PWP2P25635 923 aaKnown RBP2.49□□□□□ -2.01
UBP1YDL122W RPN10P38886 268 aaKnown RBP2.49□□□□□ -2.01
UBP1YDL122W OSW5P40219 148 aa2.49□□□□□ -2.01
UBP1YDL122W MRPS18P42847 217 aa2.49□□□□□ -2.01
UBP1YDL122W TIM54P47045 478 aa2.49□□□□□ -2.01
UBP1YDL122W VPS25P47142 202 aa2.49□□□□□ -2.01
UBP1YDL122W ZPR1P53303 486 aaKnown RBP2.49□□□□□ -2.01
UBP1YDL122W GIS4Q04233 774 aa2.49□□□□□ -2.01
UBP1YDL122W TDA5Q06417 326 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms