RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFA1	YAR007C	RRT2	P38332	387 aa		5.75	□□□□□ -1.49
RFA1	YAR007C	MSG5	P38590	489 aa		5.75	□□□□□ -1.49
RFA1	YAR007C	HIS2	P38635	335 aa		5.75	□□□□□ -1.49
RFA1	YAR007C	END3	P39013	349 aa		5.75	□□□□□ -1.49
RFA1	YAR007C	RGA1	P39083	1007 aa		5.75	□□□□□ -1.49
RFA1	YAR007C	YEL076C	P39971	216 aa		5.75	□□□□□ -1.49
RFA1	YAR007C	HXT8	P40886	569 aa		5.75	□□□□□ -1.49
RFA1	YAR007C	YGR016W	P53209	190 aa		5.75	□□□□□ -1.49
RFA1	YAR007C	UTP22	P53254	1237 aa	Predicted RBP	5.75	□□□□□ -1.49
RFA1	YAR007C	MTG1	Q03151	367 aa	Predicted RBP	5.75	□□□□□ -1.49
RFA1	YAR007C	OXR1	Q08952	273 aa		5.75	□□□□□ -1.49
RFA1	YAR007C	YLL054C	Q12244	843 aa		5.75	□□□□□ -1.49
RFA1	YAR007C	HEM15	P16622	393 aa		5.74	□□□□□ -1.49
RFA1	YAR007C	SIT4	P20604	311 aa		5.74	□□□□□ -1.49
RFA1	YAR007C	DPB2	P24482	689 aa	Predicted RBP	5.74	□□□□□ -1.49
RFA1	YAR007C	TRK2	P28584	889 aa		5.74	□□□□□ -1.49
RFA1	YAR007C	YKL023W	P36103	277 aa	Known RBP	5.74	□□□□□ -1.49
RFA1	YAR007C	YNL115C	P53925	644 aa		5.74	□□□□□ -1.49
RFA1	YAR007C	NIS1	P53939	407 aa		5.74	□□□□□ -1.49
RFA1	YAR007C	RSM24	Q03976	319 aa		5.74	□□□□□ -1.49
RFA1	YAR007C	YDR179W-A	Q03983	463 aa		5.74	□□□□□ -1.49
RFA1	YAR007C	RLP24	Q07915	199 aa	Known RBP	5.74	□□□□□ -1.49
RFA1	YAR007C	TCO89	Q08921	799 aa		5.74	□□□□□ -1.49
RFA1	YAR007C	SGT2	Q12118	346 aa	Known RBP	5.74	□□□□□ -1.49
RFA1	YAR007C	BUG1	Q12191	341 aa		5.74	□□□□□ -1.49
RFA1	YAR007C	THS1	P04801	734 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	CKA2	P19454	339 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	URA4	P20051	364 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	CAP1	P28495	268 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	MGM1	P32266	881 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	RPN2	P32565	945 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	PRP40	P33203	583 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	TRM2	P33753	639 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	MRP8	P35719	219 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	SDS3	P40505	327 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	BRE2	P43132	505 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	RNR4	P49723	345 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	VID30	P53076	958 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	SQS1	P53866	767 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	RPL22B	P56628	122 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	HMO1	Q03973	246 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	NOC3	Q07896	663 aa	Predicted RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	VIK1	Q12045	647 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	FAL1	Q12099	399 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	GET4	Q12125	312 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	TAF3	Q12297	353 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	HAT1	Q12341	374 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	SEM1	O94742	89 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	CDC4	P07834	779 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	SUP45	P12385	437 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	SAS3	P34218	831 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	PTK1	P36002	662 aa	Predicted RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	YKR015C	P36111	568 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	FES1	P38260	290 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	YHL008C	P38750	627 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	PFK26	P40433	827 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	DPH1	P40487	425 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	TAF1	P46677	1066 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	NOP9	P47077	666 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	MSN5	P52918	1224 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	NBP1	P52919	319 aa	Predicted RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	GUP1	P53154	560 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	PTA1	Q01329	785 aa	Predicted RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	MSH6	Q03834	1242 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	ARR1	Q06596	294 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	TSR2	Q06672	205 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	MDM20	Q12387	796 aa	Known RBP	5.73	□□□□□ -1.49
RFA1	YAR007C	RAD61	Q99359	647 aa		5.73	□□□□□ -1.49
RFA1	YAR007C	GCR1	P07261	785 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	MPH2	P0CD99	609 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	MRPL25	P23369	157 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	GRX1	P25373	110 aa	Known RBP	5.72	□□□□□ -1.49
RFA1	YAR007C	KIP2	P28743	706 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	PTH2	P34222	208 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	PAM1	P37304	830 aa	Known RBP	5.72	□□□□□ -1.49
RFA1	YAR007C	TRM5	P38793	499 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	CCT3	P39077	534 aa	Known RBP	5.72	□□□□□ -1.49
RFA1	YAR007C	PSY2	P40164	858 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	UBP15	P50101	1230 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	BNI5	P53890	448 aa	Known RBP	5.72	□□□□□ -1.49
RFA1	YAR007C	FMN1	Q03778	218 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	SPO71	Q03868	1245 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	HED1	Q03937	162 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	YLH47	Q06493	454 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	YDL057W	Q07379	328 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	DSE3	Q08729	430 aa		5.72	□□□□□ -1.49
RFA1	YAR007C	DBP10	Q12389	995 aa	Known RBP	5.72	□□□□□ -1.49
RFA1	YAR007C	TY1B-A	O13527	1196 aa	Known RBP	5.71	□□□□□ -1.5
RFA1	YAR007C	CMD1	P06787	147 aa	Known RBP	5.71	□□□□□ -1.5
RFA1	YAR007C	SEC63	P14906	663 aa		5.71	□□□□□ -1.5
RFA1	YAR007C	NPP1	P25353	742 aa		5.71	□□□□□ -1.5
RFA1	YAR007C	RPL8B	P29453	256 aa	Known RBP	5.71	□□□□□ -1.5
RFA1	YAR007C	PEX2	P32800	271 aa		5.71	□□□□□ -1.5
RFA1	YAR007C	NUP120	P35729	1037 aa		5.71	□□□□□ -1.5
RFA1	YAR007C	DBP7	P36120	742 aa	Known RBP	5.71	□□□□□ -1.5
RFA1	YAR007C	ARB1	P40024	610 aa	Known RBP	5.71	□□□□□ -1.5
RFA1	YAR007C	IRR1	P40541	1150 aa		5.71	□□□□□ -1.5
RFA1	YAR007C	ALA1	P40825	983 aa	Known RBP	5.71	□□□□□ -1.5
RFA1	YAR007C	DCP2	P53550	970 aa	Known RBP	5.71	□□□□□ -1.5
RFA1	YAR007C	PLP1	Q04004	230 aa		5.71	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms