RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W ELP4Q02884 456 aaKnown RBP5.72□□□□□ -1.49
SSO1YPL232W HRT3Q12347 344 aa5.72□□□□□ -1.49
SSO1YPL232W CBP3P21560 335 aa5.71□□□□□ -1.5
SSO1YPL232W NAM7P30771 971 aaKnown RBP5.71□□□□□ -1.5
SSO1YPL232W ASF1P32447 279 aa5.71□□□□□ -1.5
SSO1YPL232W YSC83P32792 385 aa5.71□□□□□ -1.5
SSO1YPL232W MNN4P36044 1178 aa5.71□□□□□ -1.5
SSO1YPL232W UTH1P36135 365 aa5.71□□□□□ -1.5
SSO1YPL232W RAD55P38953 406 aa5.71□□□□□ -1.5
SSO1YPL232W VTC2P43585 828 aa5.71□□□□□ -1.5
SSO1YPL232W ASN1P49089 572 aaKnown RBP5.71□□□□□ -1.5
SSO1YPL232W YDL057WQ07379 328 aa5.71□□□□□ -1.5
SSO1YPL232W YDL206WQ12424 762 aa5.71□□□□□ -1.5
SSO1YPL232W CSF1Q12150 2958 aa5.7□□□□□ -1.5
SSO1YPL232W YEL076C-AP0CX16 216 aa5.7□□□□□ -1.5
SSO1YPL232W YLR464WP0CX17 216 aa5.7□□□□□ -1.5
SSO1YPL232W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
SSO1YPL232W CSE1P33307 960 aa5.7□□□□□ -1.5
SSO1YPL232W OCA5P38738 679 aa5.7□□□□□ -1.5
SSO1YPL232W GGA2P38817 585 aaKnown RBP5.7□□□□□ -1.5
SSO1YPL232W YEL076CP39971 216 aa5.7□□□□□ -1.5
SSO1YPL232W NUP82P40368 713 aa5.7□□□□□ -1.5
SSO1YPL232W SCD6P45978 349 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
SSO1YPL232W ENT3P47160 408 aa5.7□□□□□ -1.5
SSO1YPL232W CBK1P53894 756 aa5.7□□□□□ -1.5
SSO1YPL232W SEC5P89102 971 aa5.7□□□□□ -1.5
SSO1YPL232W TIF35Q04067 274 aaKnown RBP5.7□□□□□ -1.5
SSO1YPL232W HPF1Q05164 967 aa5.7□□□□□ -1.5
SSO1YPL232W TIP41Q12199 356 aa5.7□□□□□ -1.5
SSO1YPL232W HSF1P10961 833 aa5.69□□□□□ -1.5
SSO1YPL232W TAF13P11747 167 aa5.69□□□□□ -1.5
SSO1YPL232W PFK1P16861 987 aaKnown RBP5.69□□□□□ -1.5
SSO1YPL232W FPR1P20081 114 aaKnown RBP5.69□□□□□ -1.5
SSO1YPL232W PDC6P26263 563 aaKnown RBP5.69□□□□□ -1.5
SSO1YPL232W GAC1P28006 793 aa5.69□□□□□ -1.5
SSO1YPL232W MET4P32389 672 aa5.69□□□□□ -1.5
SSO1YPL232W TFB1P32776 642 aa5.69□□□□□ -1.5
SSO1YPL232W TSA1P34760 196 aaKnown RBP5.69□□□□□ -1.5
SSO1YPL232W HXT13P39924 564 aa5.69□□□□□ -1.5
SSO1YPL232W YIR007WP40566 764 aa5.69□□□□□ -1.5
SSO1YPL232W YKE2P52553 114 aa5.69□□□□□ -1.5
SSO1YPL232W NOP13P53883 403 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
SSO1YPL232W GCR2Q01722 534 aa5.69□□□□□ -1.5
SSO1YPL232W CUR1Q06469 252 aa5.69□□□□□ -1.5
SSO1YPL232W CDD1Q06549 142 aa5.69□□□□□ -1.5
SSO1YPL232W POL2P21951 2222 aaKnown RBP5.68□□□□□ -1.5
SSO1YPL232W TUF1P02992 437 aaKnown RBP5.68□□□□□ -1.5
SSO1YPL232W SSB1P11484 613 aaKnown RBP5.68□□□□□ -1.5
SSO1YPL232W REV1P12689 985 aa5.68□□□□□ -1.5
SSO1YPL232W FRS2P15625 503 aaKnown RBP5.68□□□□□ -1.5
SSO1YPL232W SAP190P36123 1033 aa5.68□□□□□ -1.5
SSO1YPL232W VRP1P37370 817 aa5.68□□□□□ -1.5
SSO1YPL232W YBR056WP38081 501 aa5.68□□□□□ -1.5
SSO1YPL232W YER158CP40095 573 aa5.68□□□□□ -1.5
SSO1YPL232W SSB2P40150 613 aaKnown RBP5.68□□□□□ -1.5
SSO1YPL232W CUE3P53137 624 aaKnown RBP5.68□□□□□ -1.5
SSO1YPL232W SDA1P53313 767 aaKnown RBP5.68□□□□□ -1.5
SSO1YPL232W YLR407WQ06070 228 aa5.68□□□□□ -1.5
SSO1YPL232W YOR296WQ08748 1289 aa5.68□□□□□ -1.5
SSO1YPL232W NDJ1Q12366 352 aa5.68□□□□□ -1.5
SSO1YPL232W TRA1P38811 3744 aa5.68□□□□□ -1.5
SSO1YPL232W BI4P03879 638 aa5.67□□□□□ -1.5
SSO1YPL232W ASP3-2P0CX77 362 aa5.67□□□□□ -1.5
SSO1YPL232W ASP3-3P0CX78 362 aa5.67□□□□□ -1.5
SSO1YPL232W ASP3-4P0CX79 362 aa5.67□□□□□ -1.5
SSO1YPL232W ASP3-1P0CZ17 362 aa5.67□□□□□ -1.5
SSO1YPL232W ALG1P16661 449 aa5.67□□□□□ -1.5
SSO1YPL232W CKA2P19454 339 aa5.67□□□□□ -1.5
SSO1YPL232W KIN3P22209 435 aa5.67□□□□□ -1.5
SSO1YPL232W PUF4P25339 888 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
SSO1YPL232W STE5P32917 917 aa5.67□□□□□ -1.5
SSO1YPL232W LEU5P38702 357 aa5.67□□□□□ -1.5
SSO1YPL232W NUP60P39705 539 aa5.67□□□□□ -1.5
SSO1YPL232W SDS3P40505 327 aa5.67□□□□□ -1.5
SSO1YPL232W GUP1P53154 560 aa5.67□□□□□ -1.5
SSO1YPL232W ADY4Q05955 493 aa5.67□□□□□ -1.5
SSO1YPL232W OPT2Q06593 877 aa5.67□□□□□ -1.5
SSO1YPL232W TAF10Q12030 206 aa5.67□□□□□ -1.5
SSO1YPL232W GET3Q12154 354 aaKnown RBP5.67□□□□□ -1.5
SSO1YPL232W TKL2P33315 681 aa5.66□□□□□ -1.5
SSO1YPL232W WSC4P38739 605 aa5.66□□□□□ -1.5
SSO1YPL232W YIL161WP40449 235 aaKnown RBP5.66□□□□□ -1.5
SSO1YPL232W ARH1P48360 493 aa5.66□□□□□ -1.5
SSO1YPL232W TOF1P53840 1238 aa5.66□□□□□ -1.5
SSO1YPL232W ARP5P53946 755 aa5.66□□□□□ -1.5
SSO1YPL232W CEG1Q01159 459 aaPredicted RBP5.66□□□□□ -1.5
SSO1YPL232W WAR1Q03631 944 aa5.66□□□□□ -1.5
SSO1YPL232W SEG1Q04279 960 aa5.66□□□□□ -1.5
SSO1YPL232W PRM6Q04705 352 aa5.66□□□□□ -1.5
SSO1YPL232W HEL2Q05580 639 aaKnown RBP5.66□□□□□ -1.5
SSO1YPL232W GPM2Q12008 311 aa5.66□□□□□ -1.5
SSO1YPL232W SGT2Q12118 346 aaKnown RBP5.66□□□□□ -1.5
SSO1YPL232W AI4P03878 556 aa5.65□□□□□ -1.5
SSO1YPL232W TBS1P38114 1094 aa5.65□□□□□ -1.5
SSO1YPL232W UBP13P38187 747 aa5.65□□□□□ -1.5
SSO1YPL232W SHE3P38272 425 aaKnown RBP5.65□□□□□ -1.5
SSO1YPL232W GDH3P39708 457 aa5.65□□□□□ -1.5
SSO1YPL232W ERG10P41338 398 aaKnown RBP5.65□□□□□ -1.5
SSO1YPL232W MID1P41821 548 aa5.65□□□□□ -1.5
SSO1YPL232W YNR065CP53751 1116 aa5.65□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms