RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W VPS34P22543 875 aa4.47□□□□□ -1.69
BUD21YOR078W FMO1P38866 432 aa4.47□□□□□ -1.69
BUD21YOR078W HRB1P38922 454 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
BUD21YOR078W LYS9P38999 446 aa4.47□□□□□ -1.69
BUD21YOR078W UBP6P43593 499 aaKnown RBP4.47□□□□□ -1.69
BUD21YOR078W ZIP2P53061 704 aa4.47□□□□□ -1.69
BUD21YOR078W ERP6P53198 216 aa4.47□□□□□ -1.69
BUD21YOR078W YBR182C-AQ8TGU6 64 aa4.47□□□□□ -1.69
BUD21YOR078W SCT1P32784 759 aa4.46□□□□□ -1.7
BUD21YOR078W ECM1P39715 212 aa4.46□□□□□ -1.7
BUD21YOR078W UBC9P50623 157 aaPredicted RBP4.46□□□□□ -1.7
BUD21YOR078W FHN1P53279 174 aa4.46□□□□□ -1.7
BUD21YOR078W SEG1Q04279 960 aa4.46□□□□□ -1.7
BUD21YOR078W RGC1Q06108 1083 aaKnown RBP4.46□□□□□ -1.7
BUD21YOR078W GRX1P25373 110 aaKnown RBP4.45□□□□□ -1.7
BUD21YOR078W ARE1P25628 610 aa4.45□□□□□ -1.7
BUD21YOR078W MVD1P32377 396 aaKnown RBP4.45□□□□□ -1.7
BUD21YOR078W PHO11P35842 467 aa4.44□□□□□ -1.7
BUD21YOR078W PHO12P38693 467 aa4.44□□□□□ -1.7
BUD21YOR078W BNA3P47039 444 aaKnown RBP4.44□□□□□ -1.7
BUD21YOR078W HXT16P47185 567 aa4.44□□□□□ -1.7
BUD21YOR078W SCS3P53012 380 aa4.44□□□□□ -1.7
BUD21YOR078W ATG4P53867 494 aa4.44□□□□□ -1.7
BUD21YOR078W REH1Q06709 432 aa4.44□□□□□ -1.7
BUD21YOR078W MLH3Q12083 715 aa4.44□□□□□ -1.7
BUD21YOR078W PHR1P05066 565 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
BUD21YOR078W YHR112CP38716 378 aa4.43□□□□□ -1.7
BUD21YOR078W PRP31P49704 494 aaPredicted RBP4.43□□□□□ -1.7
BUD21YOR078W SPO75Q07798 868 aa4.43□□□□□ -1.7
BUD21YOR078W ADE2P21264 571 aaKnown RBP4.42□□□□□ -1.7
BUD21YOR078W NUP60P39705 539 aa4.42□□□□□ -1.7
BUD21YOR078W MRK1P50873 501 aa4.42□□□□□ -1.7
BUD21YOR078W CTK1Q03957 528 aaKnown RBP4.42□□□□□ -1.7
BUD21YOR078W ERG6P25087 383 aaKnown RBP4.41□□□□□ -1.7
BUD21YOR078W SPC29P33419 253 aa4.41□□□□□ -1.7
BUD21YOR078W MUP3P38734 546 aa4.41□□□□□ -1.7
BUD21YOR078W RLP7P40693 322 aaKnown RBP4.41□□□□□ -1.7
BUD21YOR078W SHR5P41912 237 aa4.41□□□□□ -1.7
BUD21YOR078W NAN1Q02931 896 aaKnown RBP4.41□□□□□ -1.7
BUD21YOR078W YDR514CQ04408 483 aa4.41□□□□□ -1.7
BUD21YOR078W MET7Q08645 548 aa4.41□□□□□ -1.7
BUD21YOR078W CCR4P31384 837 aaKnown RBP4.4□□□□□ -1.71
BUD21YOR078W SSF2Q12153 453 aaPredicted RBP4.4□□□□□ -1.71
BUD21YOR078W HRP1Q99383 534 aaKnown RBP4.4□□□□□ -1.71
BUD21YOR078W DIF1O13577 133 aa4.39□□□□□ -1.71
BUD21YOR078W ERG11P10614 530 aa4.39□□□□□ -1.71
BUD21YOR078W THR1P17423 357 aaKnown RBP4.39□□□□□ -1.71
BUD21YOR078W PTP1P25044 335 aa4.39□□□□□ -1.71
BUD21YOR078W TY4A-JP47023 414 aa4.39□□□□□ -1.71
BUD21YOR078W YBP2P53169 641 aa4.39□□□□□ -1.71
BUD21YOR078W ATP25Q03153 612 aa4.39□□□□□ -1.71
BUD21YOR078W YDR338CQ05497 695 aa4.39□□□□□ -1.71
BUD21YOR078W RGT2Q12300 763 aa4.39□□□□□ -1.71
BUD21YOR078W TOM70P07213 617 aaKnown RBP4.38□□□□□ -1.71
BUD21YOR078W YUR1P26725 428 aa4.38□□□□□ -1.71
BUD21YOR078W APL2P36000 726 aaPredicted RBP4.38□□□□□ -1.71
BUD21YOR078W SET3P36124 751 aa4.38□□□□□ -1.71
BUD21YOR078W ALG2P43636 503 aa4.38□□□□□ -1.71
BUD21YOR078W NET1P47035 1189 aa4.38□□□□□ -1.71
BUD21YOR078W ZDS1P50111 915 aaKnown RBP4.38□□□□□ -1.71
BUD21YOR078W ARG5,6Q01217 863 aa4.38□□□□□ -1.71
BUD21YOR078W TAF8Q03750 510 aa4.38□□□□□ -1.71
BUD21YOR078W USV1Q12132 391 aa4.38□□□□□ -1.71
BUD21YOR078W CIT1P00890 479 aa4.37□□□□□ -1.71
BUD21YOR078W HSP60P19882 572 aaKnown RBP4.37□□□□□ -1.71
BUD21YOR078W FUB1P25659 250 aa4.37□□□□□ -1.71
BUD21YOR078W LTP1P40347 161 aa4.37□□□□□ -1.71
BUD21YOR078W YDL124WQ07551 312 aaKnown RBP4.37□□□□□ -1.71
BUD21YOR078W OSH2Q12451 1283 aa4.37□□□□□ -1.71
BUD21YOR078W PGK1P00560 416 aaKnown RBP4.36□□□□□ -1.71
BUD21YOR078W RAD4P14736 754 aa4.36□□□□□ -1.71
BUD21YOR078W PER1P25625 357 aa4.36□□□□□ -1.71
BUD21YOR078W BET3P36149 193 aa4.36□□□□□ -1.71
BUD21YOR078W TRZ1P36159 838 aaPredicted RBP4.36□□□□□ -1.71
BUD21YOR078W XBP1P40489 647 aa4.36□□□□□ -1.71
BUD21YOR078W SLK19Q08581 821 aaKnown RBP4.36□□□□□ -1.71
BUD21YOR078W ZRT2Q12436 422 aa4.36□□□□□ -1.71
BUD21YOR078W GMH1P36125 273 aa4.35□□□□□ -1.71
BUD21YOR078W GET2P40056 285 aa4.35□□□□□ -1.71
BUD21YOR078W BPL1P48445 690 aaPredicted RBP4.35□□□□□ -1.71
BUD21YOR078W MCM21Q06675 368 aa4.35□□□□□ -1.71
BUD21YOR078W NUP1P20676 1076 aa4.34□□□□□ -1.71
BUD21YOR078W ALY2P47029 1046 aa4.34□□□□□ -1.71
BUD21YOR078W WRS1Q12109 432 aaKnown RBP4.34□□□□□ -1.71
BUD21YOR078W YLR149CQ99296 730 aa4.34□□□□□ -1.71
BUD21YOR078W YGR125WP53273 1036 aa4.33□□□□□ -1.72
BUD21YOR078W MPS1P54199 764 aa4.33□□□□□ -1.72
BUD21YOR078W CIR2Q08822 631 aa4.33□□□□□ -1.72
BUD21YOR078W STE12P13574 688 aa4.32□□□□□ -1.72
BUD21YOR078W RPA135P22138 1203 aaKnown RBP4.32□□□□□ -1.72
BUD21YOR078W CRP1P38845 465 aaKnown RBP4.32□□□□□ -1.72
BUD21YOR078W MIT1P40002 666 aa4.32□□□□□ -1.72
BUD21YOR078W HUL4P40985 892 aa4.32□□□□□ -1.72
BUD21YOR078W FMP30Q02883 468 aa4.32□□□□□ -1.72
BUD21YOR078W YMC2P38087 329 aa4.31□□□□□ -1.72
BUD21YOR078W YHR020WP38708 688 aaKnown RBP4.31□□□□□ -1.72
BUD21YOR078W NOP2P40991 618 aaKnown RBP4.31□□□□□ -1.72
BUD21YOR078W RTA1P53047 317 aa4.31□□□□□ -1.72
BUD21YOR078W ORC4P54791 529 aa4.31□□□□□ -1.72
BUD21YOR078W HMO1Q03973 246 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 10 ms