RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	HEL2	Q05580	639 aa	Known RBP	3.33	□□□□□ -1.88
SKP2	YNL311C	BRE1	Q07457	700 aa	Known RBP	3.33	□□□□□ -1.88
SKP2	YNL311C	TFB4	Q12004	338 aa		3.33	□□□□□ -1.88
SKP2	YNL311C	IPP1	P00817	287 aa	Known RBP	3.32	□□□□□ -1.88
SKP2	YNL311C	DAL82	P21705	255 aa		3.32	□□□□□ -1.88
SKP2	YNL311C	PDC6	P26263	563 aa	Known RBP	3.32	□□□□□ -1.88
SKP2	YNL311C	MRPL40	P36534	297 aa		3.32	□□□□□ -1.88
SKP2	YNL311C	FYV10	P40492	516 aa		3.32	□□□□□ -1.88
SKP2	YNL311C	COX3	P00420	269 aa		3.32	□□□□□ -1.88
SKP2	YNL311C	TOM70	P07213	617 aa	Known RBP	3.32	□□□□□ -1.88
SKP2	YNL311C	TCP1	P12612	559 aa	Known RBP	3.32	□□□□□ -1.88
SKP2	YNL311C	RNR3	P21672	869 aa	Known RBP	3.32	□□□□□ -1.88
SKP2	YNL311C	VPS3	P23643	1011 aa		3.32	□□□□□ -1.88
SKP2	YNL311C	KTR1	P27810	393 aa	Known RBP	3.32	□□□□□ -1.88
SKP2	YNL311C	SMA1	Q02651	245 aa		3.32	□□□□□ -1.88
SKP2	YNL311C	MFM1	Q02783	413 aa		3.32	□□□□□ -1.88
SKP2	YNL311C	SEG1	Q04279	960 aa		3.32	□□□□□ -1.88
SKP2	YNL311C	TAF10	Q12030	206 aa		3.32	□□□□□ -1.88
SKP2	YNL311C	OSW2	Q12202	724 aa		3.32	□□□□□ -1.88
SKP2	YNL311C	YEL077C	Q3E7X8	1277 aa		3.32	□□□□□ -1.88
SKP2	YNL311C	CLN3	P13365	580 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	AMS1	P22855	1083 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	BRF1	P29056	596 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	ATG12	P38316	186 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	VTC2	P43585	828 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	UBX6	P47049	396 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	CUL3	P53202	744 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.31	□□□□□ -1.88	not detected
SKP2	YNL311C	TFC6	Q06339	672 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	YOL024W	Q08172	172 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	YPL066W	Q12194	479 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	YDR061W	Q12298	539 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	BRR2	P32639	2163 aa	Known RBP	3.31	□□□□□ -1.88
SKP2	YNL311C	RAS1	P01119	309 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	SNF5	P18480	905 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	SUI2	P20459	304 aa	Known RBP	3.31	□□□□□ -1.88
SKP2	YNL311C	PMI40	P29952	429 aa	Known RBP	3.31	□□□□□ -1.88
SKP2	YNL311C	SLA2	P33338	968 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	SAS3	P34218	831 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	RER2	P35196	286 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	SAK1	P38990	1142 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	NUP60	P39705	539 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	YIL161W	P40449	235 aa	Known RBP	3.31	□□□□□ -1.88
SKP2	YNL311C	YPS6	P40583	537 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	AIM23	P47015	356 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	TPO2	P53283	614 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	HER2	Q03557	464 aa		3.31	□□□□□ -1.88
SKP2	YNL311C	RPN8	Q08723	338 aa	Known RBP	3.31	□□□□□ -1.88
SKP2	YNL311C	ADE3	P07245	946 aa	Known RBP	3.3	□□□□□ -1.88
SKP2	YNL311C	RPN10	P38886	268 aa	Known RBP	3.3	□□□□□ -1.88
SKP2	YNL311C	POL31	P46957	487 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	NPA3	P47122	385 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	COQ5	P49017	307 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	SHE10	P53075	577 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	FLC3	P53121	802 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	YPL014W	Q02606	381 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	YMR187C	Q03236	431 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	CWC21	Q03375	135 aa	Known RBP	3.3	□□□□□ -1.88
SKP2	YNL311C	CDA2	Q06703	312 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	NDJ1	Q12366	352 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	PRT1	P06103	763 aa	Known RBP	3.3	□□□□□ -1.88
SKP2	YNL311C	COT1	P32798	439 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	STE5	P32917	917 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	TRM2	P33753	639 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	PFS1	P38872	237 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	RTT102	P53330	157 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	BNI5	P53890	448 aa	Known RBP	3.3	□□□□□ -1.88
SKP2	YNL311C	YNL146W	P53906	100 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	TIF35	Q04067	274 aa	Known RBP	3.3	□□□□□ -1.88
SKP2	YNL311C	IES4	Q08561	116 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	HRT3	Q12347	344 aa		3.3	□□□□□ -1.88
SKP2	YNL311C	YBR056W-A	I2HB52	66 aa		3.29	□□□□□ -1.88
SKP2	YNL311C	COX6	P00427	148 aa		3.29	□□□□□ -1.88
SKP2	YNL311C	SRD1	P09007	221 aa		3.29	□□□□□ -1.88
SKP2	YNL311C	NUD1	P32336	851 aa		3.29	□□□□□ -1.88
SKP2	YNL311C	VPS35	P34110	944 aa		3.29	□□□□□ -1.88
SKP2	YNL311C	KDX1	P36005	433 aa		3.29	□□□□□ -1.88
SKP2	YNL311C	MMS4	P38257	691 aa		3.29	□□□□□ -1.88
SKP2	YNL311C	VID24	P38263	362 aa		3.29	□□□□□ -1.88
SKP2	YNL311C	ORC6	P38826	435 aa		3.29	□□□□□ -1.88
SKP2	YNL311C	ERG10	P41338	398 aa	Known RBP	3.29	□□□□□ -1.88
SKP2	YNL311C	COQ6	P53318	479 aa		3.29	□□□□□ -1.88
SKP2	YNL311C	SEC5	P89102	971 aa		3.29	□□□□□ -1.88
SKP2	YNL311C	NOC3	Q07896	663 aa	Predicted RBP	3.29	□□□□□ -1.88
SKP2	YNL311C	CLP1	Q08685	445 aa	Predicted RBP	3.29	□□□□□ -1.88
SKP2	YNL311C	MSF1	P08425	469 aa		3.28	□□□□□ -1.88
SKP2	YNL311C	TTI1	P36097	1038 aa		3.28	□□□□□ -1.88
SKP2	YNL311C	YHR054C	P38780	354 aa		3.28	□□□□□ -1.88
SKP2	YNL311C	MRPS35	P53292	345 aa		3.28	□□□□□ -1.88
SKP2	YNL311C	YOR111W	Q99210	232 aa		3.28	□□□□□ -1.88
SKP2	YNL311C	ILV1	P00927	576 aa	Known RBP	3.28	□□□□□ -1.88
SKP2	YNL311C	RGR1	P19263	1082 aa		3.28	□□□□□ -1.88
SKP2	YNL311C	BRN1	P38170	754 aa		3.28	□□□□□ -1.88
SKP2	YNL311C	SHE3	P38272	425 aa	Known RBP	3.28	□□□□□ -1.88
SKP2	YNL311C	GAA1	P39012	614 aa		3.28	□□□□□ -1.88
SKP2	YNL311C	HEM14	P40012	539 aa		3.28	□□□□□ -1.88
SKP2	YNL311C	LTP1	P40347	161 aa		3.28	□□□□□ -1.88
SKP2	YNL311C	MNN10	P50108	393 aa	Known RBP	3.28	□□□□□ -1.88
SKP2	YNL311C	CSM3	Q04659	317 aa		3.28	□□□□□ -1.88
SKP2	YNL311C	BNA5	Q05979	453 aa		3.28	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms