RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W PLP2Q12017 286 aa3.96□□□□□ -1.78
LCB5YLR260W PDR18P53756 1333 aa3.96□□□□□ -1.78
LCB5YLR260W IDI1P15496 288 aa3.95□□□□□ -1.78
LCB5YLR260W ACE2P21192 770 aa3.95□□□□□ -1.78
LCB5YLR260W MSN1P22148 382 aa3.95□□□□□ -1.78
LCB5YLR260W VBA5P36172 582 aa3.95□□□□□ -1.78
LCB5YLR260W SEA4P38164 1038 aa3.95□□□□□ -1.78
LCB5YLR260W MLC1P53141 149 aa3.95□□□□□ -1.78
LCB5YLR260W PBP1P53297 722 aaKnown RBP3.95□□□□□ -1.78
LCB5YLR260W MTQ2Q03920 221 aaPredicted RBP3.95□□□□□ -1.78
LCB5YLR260W GIC2Q06648 383 aa3.95□□□□□ -1.78
LCB5YLR260W ISA1Q07821 250 aaPredicted RBP3.95□□□□□ -1.78
LCB5YLR260W PGC1Q08959 321 aa3.95□□□□□ -1.78
LCB5YLR260W SGT2Q12118 346 aaKnown RBP3.95□□□□□ -1.78
LCB5YLR260W TY1A-BLQ12266 440 aa3.95□□□□□ -1.78
LCB5YLR260W DBP10Q12389 995 aaKnown RBP3.95□□□□□ -1.78
LCB5YLR260W NCB2Q92317 146 aa3.95□□□□□ -1.78
LCB5YLR260W SPO16P17122 198 aa3.94□□□□□ -1.78
LCB5YLR260W COQ1P18900 473 aa3.94□□□□□ -1.78
LCB5YLR260W PUF4P25339 888 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
LCB5YLR260W AGP1P25376 633 aa3.94□□□□□ -1.78
LCB5YLR260W ABD1P32783 436 aaPredicted RBP3.94□□□□□ -1.78
LCB5YLR260W SMC1P32908 1225 aa3.94□□□□□ -1.78
LCB5YLR260W MRP8P35719 219 aa3.94□□□□□ -1.78
LCB5YLR260W OCT1P35999 772 aa3.94□□□□□ -1.78
LCB5YLR260W OSH7P38755 437 aa3.94□□□□□ -1.78
LCB5YLR260W BCD1P38772 366 aa3.94□□□□□ -1.78
LCB5YLR260W PIC2P40035 300 aa3.94□□□□□ -1.78
LCB5YLR260W MGS1P40151 587 aa3.94□□□□□ -1.78
LCB5YLR260W GPD2P41911 440 aaKnown RBP3.94□□□□□ -1.78
LCB5YLR260W NPY1P53164 384 aa3.94□□□□□ -1.78
LCB5YLR260W UTP8P53276 713 aaKnown RBP3.94□□□□□ -1.78
LCB5YLR260W MEP3P53390 489 aa3.94□□□□□ -1.78
LCB5YLR260W YNR063WP53749 607 aa3.94□□□□□ -1.78
LCB5YLR260W TIM11P81449 96 aaPredicted RBP3.94□□□□□ -1.78
LCB5YLR260W ULP1Q02724 621 aa3.94□□□□□ -1.78
LCB5YLR260W YPL109CQ02981 657 aa3.94□□□□□ -1.78
LCB5YLR260W NSE5Q03718 556 aa3.94□□□□□ -1.78
LCB5YLR260W SHE9Q04172 456 aa3.94□□□□□ -1.78
LCB5YLR260W LAP2Q10740 671 aa3.94□□□□□ -1.78
LCB5YLR260W MCM5P29496 775 aaKnown RBP3.94□□□□□ -1.78
LCB5YLR260W DPH2P32461 534 aa3.94□□□□□ -1.78
LCB5YLR260W NAB2P32505 525 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
LCB5YLR260W YKL100CP34248 587 aa3.94□□□□□ -1.78
LCB5YLR260W CST26P38226 397 aa3.94□□□□□ -1.78
LCB5YLR260W DSS1P39112 969 aa3.94□□□□□ -1.78
LCB5YLR260W ERR3P42222 437 aa3.94□□□□□ -1.78
LCB5YLR260W RGD2P43556 714 aa3.94□□□□□ -1.78
LCB5YLR260W IML2P47031 731 aa3.94□□□□□ -1.78
LCB5YLR260W NET1P47035 1189 aa3.94□□□□□ -1.78
LCB5YLR260W SCW11P53189 542 aa3.94□□□□□ -1.78
LCB5YLR260W LCB5Q06147 687 aaKnown RBP3.94□□□□□ -1.78
LCB5YLR260W YCS4Q06156 1176 aa3.94□□□□□ -1.78
LCB5YLR260W YOR296WQ08748 1289 aa3.94□□□□□ -1.78
LCB5YLR260W CFT2Q12102 859 aaPredicted RBP3.94□□□□□ -1.78
LCB5YLR260W CMR1Q12510 522 aaKnown RBP3.94□□□□□ -1.78
LCB5YLR260W MDM12Q92328 271 aa3.94□□□□□ -1.78
LCB5YLR260W RGP1P16664 663 aa3.93□□□□□ -1.78
LCB5YLR260W PRE8P23639 250 aa3.93□□□□□ -1.78
LCB5YLR260W MET22P32179 357 aa3.93□□□□□ -1.78
LCB5YLR260W PRO3P32263 286 aaKnown RBP3.93□□□□□ -1.78
LCB5YLR260W BEM3P32873 1128 aa3.93□□□□□ -1.78
LCB5YLR260W PBY1P38254 753 aa3.93□□□□□ -1.78
LCB5YLR260W RAD55P38953 406 aa3.93□□□□□ -1.78
LCB5YLR260W POP2P39008 433 aa3.93□□□□□ -1.78
LCB5YLR260W NTA1P40354 457 aa3.93□□□□□ -1.78
LCB5YLR260W ALR2P43553 858 aa3.93□□□□□ -1.78
LCB5YLR260W CNN1P43618 361 aa3.93□□□□□ -1.78
LCB5YLR260W IRC8P47046 822 aa3.93□□□□□ -1.78
LCB5YLR260W SKP1P52286 194 aa3.93□□□□□ -1.78
LCB5YLR260W NAM8Q00539 523 aaKnown RBP3.93□□□□□ -1.78
LCB5YLR260W CUS1Q02554 436 aaPredicted RBP3.93□□□□□ -1.78
LCB5YLR260W OPY2Q06810 360 aa3.93□□□□□ -1.78
LCB5YLR260W YPL260WQ08977 551 aa3.93□□□□□ -1.78
LCB5YLR260W NOP58Q12499 511 aaKnown RBP3.93□□□□□ -1.78
LCB5YLR260W SAM2P19358 384 aaKnown RBP3.93□□□□□ -1.78
LCB5YLR260W GIP1P38229 639 aa3.93□□□□□ -1.78
LCB5YLR260W HDA1P53973 706 aa3.93□□□□□ -1.78
LCB5YLR260W TRS130Q03660 1102 aa3.93□□□□□ -1.78
LCB5YLR260W YML037CQ03703 340 aa3.93□□□□□ -1.78
LCB5YLR260W YDR444WQ04093 687 aa3.93□□□□□ -1.78
LCB5YLR260W SKG3Q06315 1026 aa3.93□□□□□ -1.78
LCB5YLR260W RSC58Q07979 502 aa3.93□□□□□ -1.78
LCB5YLR260W TMA46Q12000 345 aaKnown RBP3.93□□□□□ -1.78
LCB5YLR260W CDC16P09798 840 aa3.92□□□□□ -1.78
LCB5YLR260W RNA1P11745 407 aaKnown RBP3.92□□□□□ -1.78
LCB5YLR260W SAN1P22470 610 aa3.92□□□□□ -1.78
LCB5YLR260W RAD51P25454 400 aa3.92□□□□□ -1.78
LCB5YLR260W DHR2P36009 735 aaPredicted RBP3.92□□□□□ -1.78
LCB5YLR260W MCD4P36051 919 aa3.92□□□□□ -1.78
LCB5YLR260W RRF1P38771 230 aa3.92□□□□□ -1.78
LCB5YLR260W FIR1P40020 876 aa3.92□□□□□ -1.78
LCB5YLR260W LYS14P40971 790 aa3.92□□□□□ -1.78
LCB5YLR260W TAN1P53072 289 aaPredicted RBP3.92□□□□□ -1.78
LCB5YLR260W GTR1Q00582 310 aa3.92□□□□□ -1.78
LCB5YLR260W ADI1Q03677 179 aa3.92□□□□□ -1.78
LCB5YLR260W YMR018WQ04364 514 aa3.92□□□□□ -1.78
LCB5YLR260W MRL1Q06815 381 aa3.92□□□□□ -1.78
LCB5YLR260W MSS18P08593 268 aa3.91□□□□□ -1.78
LCB5YLR260W VBA3P25594 458 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms