RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C DPB4Q04603 196 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C EAF1Q06337 982 aa2.44□□□□□ -2.02
CSF1YLR087C AOS1Q06624 347 aa2.44□□□□□ -2.02
CSF1YLR087C RPO26P20435 155 aa2.44□□□□□ -2.02
CSF1YLR087C ITR2P30606 609 aa2.44□□□□□ -2.02
CSF1YLR087C PRS1P32895 427 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C VPS35P34110 944 aa2.44□□□□□ -2.02
CSF1YLR087C GPT2P36148 743 aa2.44□□□□□ -2.02
CSF1YLR087C ECM4P36156 370 aa2.44□□□□□ -2.02
CSF1YLR087C GEM1P39722 662 aa2.44□□□□□ -2.02
CSF1YLR087C TIM13P53299 105 aa2.44□□□□□ -2.02
CSF1YLR087C HST2P53686 357 aa2.44□□□□□ -2.02
CSF1YLR087C YNR029CP53729 429 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C IPI3P53877 555 aa2.44□□□□□ -2.02
CSF1YLR087C JIP4Q03361 876 aa2.44□□□□□ -2.02
CSF1YLR087C MAK3Q03503 176 aa2.44□□□□□ -2.02
CSF1YLR087C ESF1Q06344 628 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C DDC1Q08949 612 aa2.44□□□□□ -2.02
CSF1YLR087C LYS21Q12122 440 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C PMA1P05030 918 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C RPL6BP05739 176 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C PET54P10834 293 aa2.44□□□□□ -2.02
CSF1YLR087C MET18P40469 1032 aa2.44□□□□□ -2.02
CSF1YLR087C PCI8P40512 444 aa2.44□□□□□ -2.02
CSF1YLR087C THI12P42883 340 aa2.44□□□□□ -2.02
CSF1YLR087C THI5P43534 340 aa2.44□□□□□ -2.02
CSF1YLR087C THI11P47183 340 aa2.44□□□□□ -2.02
CSF1YLR087C PUS4P48567 403 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C YKE2P52553 114 aa2.44□□□□□ -2.02
CSF1YLR087C MDR1P53258 950 aa2.44□□□□□ -2.02
CSF1YLR087C COS6P53344 381 aa2.44□□□□□ -2.02
CSF1YLR087C RPL6AQ02326 176 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C CSN9Q03981 162 aa2.44□□□□□ -2.02
CSF1YLR087C KAR5Q04746 504 aa2.44□□□□□ -2.02
CSF1YLR087C YPR091CQ06833 770 aa2.44□□□□□ -2.02
CSF1YLR087C THI13Q07748 340 aa2.44□□□□□ -2.02
CSF1YLR087C PTP1P25044 335 aa2.44□□□□□ -2.02
CSF1YLR087C RAD51P25454 400 aa2.44□□□□□ -2.02
CSF1YLR087C PSE1P32337 1089 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C FRD1P32614 470 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C LHS1P36016 881 aa2.44□□□□□ -2.02
CSF1YLR087C ECM13P38195 257 aa2.44□□□□□ -2.02
CSF1YLR087C RAD55P38953 406 aa2.44□□□□□ -2.02
CSF1YLR087C BUD16P39988 312 aa2.44□□□□□ -2.02
CSF1YLR087C MRX12P47084 519 aa2.44□□□□□ -2.02
CSF1YLR087C NNT1Q05874 261 aa2.44□□□□□ -2.02
CSF1YLR087C RSB1Q08417 382 aa2.44□□□□□ -2.02
CSF1YLR087C CIT2P08679 460 aa2.44□□□□□ -2.02
CSF1YLR087C SSB1P11484 613 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C STE6P12866 1290 aa2.44□□□□□ -2.02
CSF1YLR087C GSY2P27472 705 aa2.44□□□□□ -2.02
CSF1YLR087C VMA5P31412 392 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C ECM32P32644 1121 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C NOP4P37838 685 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C RIB5P38145 238 aa2.44□□□□□ -2.02
CSF1YLR087C YMR262WP38430 313 aa2.44□□□□□ -2.02
CSF1YLR087C SSB2P40150 613 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C YDC1Q02896 317 aa2.44□□□□□ -2.02
CSF1YLR087C KAP120Q02932 1032 aa2.44□□□□□ -2.02
CSF1YLR087C GPI17Q04080 534 aa2.44□□□□□ -2.02
CSF1YLR087C SSQ1Q05931 657 aaPredicted RBP2.44□□□□□ -2.02
CSF1YLR087C KEL3Q08979 651 aaPredicted RBP2.44□□□□□ -2.02
CSF1YLR087C CDC53Q12018 815 aaKnown RBP2.44□□□□□ -2.02
CSF1YLR087C GAL4P04386 881 aa2.43□□□□□ -2.02
CSF1YLR087C HOP09932 586 aa2.43□□□□□ -2.02
CSF1YLR087C APL1P27351 700 aa2.43□□□□□ -2.02
CSF1YLR087C SRP40P32583 406 aaPredicted RBP2.43□□□□□ -2.02
CSF1YLR087C AST1P35183 429 aa2.43□□□□□ -2.02
CSF1YLR087C TPS3P38426 1054 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C TOM71P38825 639 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C NOP9P47077 666 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C SPP1Q03012 353 aa2.43□□□□□ -2.02
CSF1YLR087C NSE5Q03718 556 aa2.43□□□□□ -2.02
CSF1YLR087C RPP1BP10622 106 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C ICL1P28240 557 aaPredicted RBP2.43□□□□□ -2.02
CSF1YLR087C SSH4P32343 579 aa2.43□□□□□ -2.02
CSF1YLR087C MDL2P33311 773 aa2.43□□□□□ -2.02
CSF1YLR087C GRS1P38088 690 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C FES1P38260 290 aa2.43□□□□□ -2.02
CSF1YLR087C YHL050CP38721 697 aa2.43□□□□□ -2.02
CSF1YLR087C GGA2P38817 585 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C MDJ2P42834 146 aa2.43□□□□□ -2.02
CSF1YLR087C ASE1P50275 885 aa2.43□□□□□ -2.02
CSF1YLR087C CLU1Q03690 1277 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C IRC3Q06683 689 aa2.43□□□□□ -2.02
CSF1YLR087C PRD1P25375 712 aa2.43□□□□□ -2.02
CSF1YLR087C SEC8P32855 1065 aa2.43□□□□□ -2.02
CSF1YLR087C CAF4P36130 643 aa2.43□□□□□ -2.02
CSF1YLR087C TDA3P38758 523 aa2.43□□□□□ -2.02
CSF1YLR087C PZF1P39933 429 aa2.43□□□□□ -2.02
CSF1YLR087C FIS1P40515 155 aa2.43□□□□□ -2.02
CSF1YLR087C DMA2P53924 522 aa2.43□□□□□ -2.02
CSF1YLR087C SEC5P89102 971 aa2.43□□□□□ -2.02
CSF1YLR087C CLP1Q08685 445 aaPredicted RBP2.43□□□□□ -2.02
CSF1YLR087C RPO21P04050 1733 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C TDH1P00360 332 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C CDC7P06243 507 aa2.43□□□□□ -2.02
CSF1YLR087C RPC40P07703 335 aaKnown RBP2.43□□□□□ -2.02
CSF1YLR087C PET122P10355 254 aa2.43□□□□□ -2.02
CSF1YLR087C MSP1P28737 362 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms