RNA–Protein interactions for RNA: YKL109W

HAP4, Transcript of Transcription factor, yeast

Gene HAP4, Length 1,665 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAP4	YKL109W	YKL133C	P36066	463 aa		4.74	□□□□□ -1.65
HAP4	YKL109W	MIP6	P38760	659 aa	Known RBP	4.74	□□□□□ -1.65
HAP4	YKL109W	SDP1	P40479	209 aa		4.74	□□□□□ -1.65
HAP4	YKL109W	SSY5	P47002	699 aa		4.74	□□□□□ -1.65
HAP4	YKL109W	ASM4	Q05166	528 aa		4.74	□□□□□ -1.65
HAP4	YKL109W	YDL121C	Q07541	149 aa		4.74	□□□□□ -1.65
HAP4	YKL109W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
HAP4	YKL109W	YKU70	P32807	602 aa		4.73	□□□□□ -1.65
HAP4	YKL109W	YHR078W	P38799	552 aa		4.73	□□□□□ -1.65
HAP4	YKL109W	BEM4	P39011	633 aa		4.73	□□□□□ -1.65
HAP4	YKL109W	RNR4	P49723	345 aa	Known RBP	4.73	□□□□□ -1.65
HAP4	YKL109W	FOL2	P51601	243 aa	Known RBP	4.73	□□□□□ -1.65
HAP4	YKL109W	SVL3	Q03088	825 aa	Known RBP	4.73	□□□□□ -1.65
HAP4	YKL109W	ADY3	Q07732	790 aa		4.73	□□□□□ -1.65
HAP4	YKL109W	PUS1	Q12211	544 aa	Known RBP	4.73	□□□□□ -1.65
HAP4	YKL109W	TRP3	P00937	484 aa		4.73	□□□□□ -1.65
HAP4	YKL109W	APA1	P16550	321 aa	Known RBP	4.73	□□□□□ -1.65
HAP4	YKL109W	HCA4	P20448	770 aa	Known RBP	4.73	□□□□□ -1.65
HAP4	YKL109W	ATG19	P35193	415 aa		4.73	□□□□□ -1.65
HAP4	YKL109W	YHL041W	P38730	149 aa		4.73	□□□□□ -1.65
HAP4	YKL109W	RIM4	P38741	713 aa		4.73	□□□□□ -1.65
HAP4	YKL109W	HIS6	P40545	261 aa		4.73	□□□□□ -1.65
HAP4	YKL109W	DPB3	P27344	201 aa		4.72	□□□□□ -1.65
HAP4	YKL109W	STE14	P32584	239 aa		4.72	□□□□□ -1.65
HAP4	YKL109W	YKL222C	P35995	705 aa		4.72	□□□□□ -1.65
HAP4	YKL109W	AKL1	P38080	1108 aa	Known RBP	4.72	□□□□□ -1.65
HAP4	YKL109W	KTR4	P38131	464 aa		4.72	□□□□□ -1.65
HAP4	YKL109W	ICP55	P40051	511 aa		4.72	□□□□□ -1.65
HAP4	YKL109W	URM1	P40554	99 aa	Predicted RBP	4.72	□□□□□ -1.65
HAP4	YKL109W	CNM67	P53865	581 aa	Known RBP	4.72	□□□□□ -1.65
HAP4	YKL109W	PLB2	Q03674	706 aa		4.72	□□□□□ -1.65
HAP4	YKL109W	TPO1	Q07824	586 aa		4.72	□□□□□ -1.65
HAP4	YKL109W	UPC2	Q12151	913 aa		4.72	□□□□□ -1.65
HAP4	YKL109W	MSS18	P08593	268 aa		4.71	□□□□□ -1.66
HAP4	YKL109W	GLN4	P13188	809 aa	Known RBP	4.71	□□□□□ -1.66
HAP4	YKL109W	CDC26	P14724	124 aa		4.71	□□□□□ -1.66
HAP4	YKL109W	ETP1	P38748	585 aa	Known RBP	4.71	□□□□□ -1.66
HAP4	YKL109W	SAK1	P38990	1142 aa		4.71	□□□□□ -1.66
HAP4	YKL109W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
HAP4	YKL109W	NOP15	P53927	220 aa	Predicted RBP	4.71	□□□□□ -1.66
HAP4	YKL109W	YLR407W	Q06070	228 aa		4.71	□□□□□ -1.66
HAP4	YKL109W	PFK1	P16861	987 aa	Known RBP	4.7	□□□□□ -1.66
HAP4	YKL109W	YKR073C	P36153	106 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	YHR202W	P38887	602 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	VID28	P40547	921 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	PFA3	P42836	336 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	QRI7	P43122	407 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	BFA1	P47113	574 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	MTR3	P48240	250 aa	Predicted RBP	4.7	□□□□□ -1.66
HAP4	YKL109W	GCV2	P49095	1034 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	CEG1	Q01159	459 aa	Predicted RBP	4.7	□□□□□ -1.66
HAP4	YKL109W	MUS81	Q04149	632 aa	Predicted RBP	4.7	□□□□□ -1.66
HAP4	YKL109W	YDL177C	Q12257	170 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	YKR075C	P36155	307 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	MET12	P46151	657 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	TAN1	P53072	289 aa	Predicted RBP	4.7	□□□□□ -1.66
HAP4	YKL109W	GPD1	Q00055	391 aa	Known RBP	4.7	□□□□□ -1.66
HAP4	YKL109W	OMS1	Q06668	471 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	NKP1	Q12493	238 aa		4.7	□□□□□ -1.66
HAP4	YKL109W	PRP4	P20053	465 aa	Known RBP	4.69	□□□□□ -1.66
HAP4	YKL109W	SED4	P25365	1065 aa		4.69	□□□□□ -1.66
HAP4	YKL109W	IMG2	P25642	146 aa	Predicted RBP	4.69	□□□□□ -1.66
HAP4	YKL109W	HXT4	P32467	576 aa		4.69	□□□□□ -1.66
HAP4	YKL109W	MRS6	P32864	603 aa	Known RBP	4.69	□□□□□ -1.66
HAP4	YKL109W	PZF1	P39933	429 aa		4.69	□□□□□ -1.66
HAP4	YKL109W	EAF5	P39995	279 aa		4.69	□□□□□ -1.66
HAP4	YKL109W	IES1	P43579	692 aa		4.69	□□□□□ -1.66
HAP4	YKL109W	SET2	P46995	733 aa	Known RBP	4.69	□□□□□ -1.66
HAP4	YKL109W	GTF1	P53260	183 aa	Predicted RBP	4.69	□□□□□ -1.66
HAP4	YKL109W	PAP2	P53632	584 aa	Known RBP	4.69	□□□□□ -1.66
HAP4	YKL109W	ASI2	P53895	289 aa		4.69	□□□□□ -1.66
HAP4	YKL109W	ROT1	Q03691	256 aa		4.69	□□□□□ -1.66
HAP4	YKL109W	CDC6	P09119	513 aa		4.68	□□□□□ -1.66
HAP4	YKL109W	TUB3	P09734	445 aa	Known RBP	4.68	□□□□□ -1.66
HAP4	YKL109W	HOP1	P20050	605 aa		4.68	□□□□□ -1.66
HAP4	YKL109W	GID8	P40208	455 aa		4.68	□□□□□ -1.66
HAP4	YKL109W	ORC4	P54791	529 aa		4.68	□□□□□ -1.66
HAP4	YKL109W	YPS7	Q06325	596 aa		4.68	□□□□□ -1.66
HAP4	YKL109W	NGL1	Q08213	363 aa	Known RBP	4.68	□□□□□ -1.66
HAP4	YKL109W	CWC2	Q12046	339 aa	Predicted RBP	4.68	□□□□□ -1.66
HAP4	YKL109W	YOL114C	Q12322	202 aa		4.68	□□□□□ -1.66
HAP4	YKL109W	RPS17A	P02407	136 aa	Known RBP	4.67	□□□□□ -1.66
HAP4	YKL109W	RPS17B	P14127	136 aa	Known RBP	4.67	□□□□□ -1.66
HAP4	YKL109W	DBF20	P32328	564 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	PTH2	P34222	208 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	APN2	P38207	520 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	EXO84	P38261	753 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	TOS1	P38288	455 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	MSS4	P38994	779 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	VHR1	P40522	640 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	IRC5	P43610	853 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	NCS6	P53088	359 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	HOL1	P53389	586 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	YMR210W	Q03649	449 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	SGD1	Q06132	899 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	BRE1	Q07457	700 aa	Known RBP	4.67	□□□□□ -1.66
HAP4	YKL109W	MED7	Q08278	222 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	HMI1	Q12039	706 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	HIS5	P07172	385 aa		4.67	□□□□□ -1.66
HAP4	YKL109W	SEC21	P32074	935 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms