RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W PSY4P38193 441 aa2.36□□□□□ -2.03
RTT107YHR154W BIT2P38346 545 aa2.36□□□□□ -2.03
RTT107YHR154W UBP15P50101 1230 aa2.36□□□□□ -2.03
RTT107YHR154W YGR117CP53270 476 aa2.36□□□□□ -2.03
RTT107YHR154W CUS1Q02554 436 aaPredicted RBP2.36□□□□□ -2.03
RTT107YHR154W MED1Q12321 566 aa2.36□□□□□ -2.03
RTT107YHR154W LPD1P09624 499 aaKnown RBP2.35□□□□□ -2.03
RTT107YHR154W DAL7P21826 554 aa2.35□□□□□ -2.03
RTT107YHR154W HBS1P32769 611 aaKnown RBP2.35□□□□□ -2.03
RTT107YHR154W GPP2P40106 250 aaKnown RBP2.35□□□□□ -2.03
RTT107YHR154W YIL165CP40446 119 aa2.35□□□□□ -2.03
RTT107YHR154W RSC8P43609 557 aaKnown RBP2.35□□□□□ -2.03
RTT107YHR154W ALY2P47029 1046 aa2.35□□□□□ -2.03
RTT107YHR154W GNP1P48813 663 aa2.35□□□□□ -2.03
RTT107YHR154W HNT2P49775 206 aa2.35□□□□□ -2.03
RTT107YHR154W UBC9P50623 157 aaPredicted RBP2.35□□□□□ -2.03
RTT107YHR154W BTN2P53286 410 aa2.35□□□□□ -2.03
RTT107YHR154W YPL034WQ03083 165 aa2.35□□□□□ -2.03
RTT107YHR154W YDR514CQ04408 483 aa2.35□□□□□ -2.03
RTT107YHR154W RTP1Q12751 981 aa2.35□□□□□ -2.03
RTT107YHR154W YDR461C-AQ2V2P7 80 aa2.35□□□□□ -2.03
RTT107YHR154W LYS2P07702 1392 aa2.35□□□□□ -2.03
RTT107YHR154W TAF13P11747 167 aa2.35□□□□□ -2.03
RTT107YHR154W HMG1P12683 1054 aa2.35□□□□□ -2.03
RTT107YHR154W PCL2P25693 308 aa2.35□□□□□ -2.03
RTT107YHR154W DAL1P32375 460 aa2.35□□□□□ -2.03
RTT107YHR154W SPC29P33419 253 aa2.35□□□□□ -2.03
RTT107YHR154W SEG2P34250 1132 aa2.35□□□□□ -2.03
RTT107YHR154W MGS1P40151 587 aa2.35□□□□□ -2.03
RTT107YHR154W SHR5P41912 237 aa2.35□□□□□ -2.03
RTT107YHR154W GZF3P42944 551 aaKnown RBP2.35□□□□□ -2.03
RTT107YHR154W DUG1P43616 481 aaKnown RBP2.35□□□□□ -2.03
RTT107YHR154W JJJ2P46997 583 aa2.35□□□□□ -2.03
RTT107YHR154W BNA1P47096 177 aa2.35□□□□□ -2.03
RTT107YHR154W NIT3P49954 291 aa2.35□□□□□ -2.03
RTT107YHR154W YBP2P53169 641 aa2.35□□□□□ -2.03
RTT107YHR154W MSH6Q03834 1242 aa2.35□□□□□ -2.03
RTT107YHR154W RBA50Q04418 439 aa2.35□□□□□ -2.03
RTT107YHR154W CRR1Q05790 422 aa2.35□□□□□ -2.03
RTT107YHR154W NBA1Q08229 501 aaKnown RBP2.35□□□□□ -2.03
RTT107YHR154W MET7Q08645 548 aa2.35□□□□□ -2.03
RTT107YHR154W GUP2Q08929 609 aa2.35□□□□□ -2.03
RTT107YHR154W NUR1Q12066 484 aa2.35□□□□□ -2.03
RTT107YHR154W YPL066WQ12194 479 aa2.35□□□□□ -2.03
RTT107YHR154W PTC5Q12511 572 aa2.35□□□□□ -2.03
RTT107YHR154W YPR117WQ06116 2489 aa2.35□□□□□ -2.03
RTT107YHR154W PMD1P32634 1753 aa2.35□□□□□ -2.03
RTT107YHR154W DBP5P20449 482 aaKnown RBP2.34□□□□□ -2.03
RTT107YHR154W SAN1P22470 610 aa2.34□□□□□ -2.03
RTT107YHR154W OMA1P36163 345 aa2.34□□□□□ -2.03
RTT107YHR154W SRP72P38688 640 aaKnown RBP2.34□□□□□ -2.03
RTT107YHR154W ACA1P39970 489 aa2.34□□□□□ -2.03
RTT107YHR154W EMP65P40085 556 aa2.34□□□□□ -2.03
RTT107YHR154W NEO1P40527 1151 aa2.34□□□□□ -2.03
RTT107YHR154W GPD2P41911 440 aaKnown RBP2.34□□□□□ -2.03
RTT107YHR154W RBG2P53295 368 aaKnown RBP2.34□□□□□ -2.03
RTT107YHR154W MEP3P53390 489 aa2.34□□□□□ -2.03
RTT107YHR154W PTA1Q01329 785 aaPredicted RBP2.34□□□□□ -2.03
RTT107YHR154W SRP1Q02821 542 aaKnown RBP2.34□□□□□ -2.03
RTT107YHR154W RSC3Q06639 885 aa2.34□□□□□ -2.03
RTT107YHR154W ISA1Q07821 250 aaPredicted RBP2.34□□□□□ -2.03
RTT107YHR154W PLP2Q12017 286 aa2.34□□□□□ -2.03
RTT107YHR154W YOL114CQ12322 202 aa2.34□□□□□ -2.03
RTT107YHR154W SES1P07284 462 aaKnown RBP2.34□□□□□ -2.03
RTT107YHR154W RPT3P33298 428 aaKnown RBP2.34□□□□□ -2.03
RTT107YHR154W ADD66P36040 267 aa2.34□□□□□ -2.03
RTT107YHR154W SAW1P39735 261 aa2.34□□□□□ -2.03
RTT107YHR154W HXT13P39924 564 aa2.34□□□□□ -2.03
RTT107YHR154W ESL1P40456 1118 aa2.34□□□□□ -2.03
RTT107YHR154W SMK1P41808 388 aa2.34□□□□□ -2.03
RTT107YHR154W YFL040WP43562 540 aa2.34□□□□□ -2.03
RTT107YHR154W YFR016CP43597 1233 aaKnown RBP2.34□□□□□ -2.03
RTT107YHR154W NIT2P47016 307 aa2.34□□□□□ -2.03
RTT107YHR154W TAD1P53065 400 aa2.34□□□□□ -2.03
RTT107YHR154W HXT17P53631 564 aa2.34□□□□□ -2.03
RTT107YHR154W HXT15P54854 567 aa2.34□□□□□ -2.03
RTT107YHR154W CRF1Q04930 467 aa2.34□□□□□ -2.03
RTT107YHR154W YPR196WQ06595 470 aa2.34□□□□□ -2.03
RTT107YHR154W MCH5Q08777 521 aa2.34□□□□□ -2.03
RTT107YHR154W CTI6Q08923 506 aa2.34□□□□□ -2.03
RTT107YHR154W STF1P01098 86 aa2.34□□□□□ -2.04
RTT107YHR154W PFK2P16862 959 aaKnown RBP RIP-Chip data2.34□□□□□ -2.04not detected
RTT107YHR154W DBF4P32325 704 aa2.34□□□□□ -2.04
RTT107YHR154W PAH1P32567 862 aa2.34□□□□□ -2.04
RTT107YHR154W NUP120P35729 1037 aa2.34□□□□□ -2.04
RTT107YHR154W ALG3P38179 458 aa2.34□□□□□ -2.04
RTT107YHR154W NCL1P38205 684 aaKnown RBP2.34□□□□□ -2.04
RTT107YHR154W RFC1P38630 861 aaKnown RBP2.34□□□□□ -2.04
RTT107YHR154W UME6P39001 836 aa2.34□□□□□ -2.04
RTT107YHR154W POP2P39008 433 aa2.34□□□□□ -2.04
RTT107YHR154W FAF1P40546 346 aaPredicted RBP2.34□□□□□ -2.04
RTT107YHR154W QRI7P43122 407 aa2.34□□□□□ -2.04
RTT107YHR154W YFL052WP43551 465 aa2.34□□□□□ -2.04
RTT107YHR154W MNN11P46985 422 aaKnown RBP2.34□□□□□ -2.04
RTT107YHR154W RNR4P49723 345 aaKnown RBP2.34□□□□□ -2.04
RTT107YHR154W ZIP2P53061 704 aa2.34□□□□□ -2.04
RTT107YHR154W MRPL19P53875 158 aa2.34□□□□□ -2.04
RTT107YHR154W SPO71Q03868 1245 aa2.34□□□□□ -2.04
RTT107YHR154W YCG1Q06680 1035 aa2.34□□□□□ -2.04
RTT107YHR154W TAH18Q12181 623 aa2.34□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms