RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C SGO1Q08490 590 aa3.29□□□□□ -1.88
RPN1YHR027C RIM20Q12033 661 aa3.29□□□□□ -1.88
RPN1YHR027C YLR125WQ12138 136 aa3.29□□□□□ -1.88
RPN1YHR027C NCA2Q12374 616 aa3.29□□□□□ -1.88
RPN1YHR027C SPO21Q12411 609 aa3.29□□□□□ -1.88
RPN1YHR027C TY1B-NL2Q99337 1749 aaKnown RBP3.29□□□□□ -1.88
RPN1YHR027C DSF1P0CX08 502 aa3.29□□□□□ -1.88
RPN1YHR027C YNR073CP0CX09 502 aa3.29□□□□□ -1.88
RPN1YHR027C MAK16P10962 306 aaPredicted RBP3.29□□□□□ -1.88
RPN1YHR027C VMA4P22203 233 aaKnown RBP3.29□□□□□ -1.88
RPN1YHR027C SPS22P25380 463 aa3.29□□□□□ -1.88
RPN1YHR027C SEC65P29478 273 aa3.29□□□□□ -1.88
RPN1YHR027C SMI1P32566 505 aa3.29□□□□□ -1.88
RPN1YHR027C SLX1P38324 304 aa3.29□□□□□ -1.88
RPN1YHR027C YHR112CP38716 378 aa3.29□□□□□ -1.88
RPN1YHR027C LSM12P38828 187 aaKnown RBP3.29□□□□□ -1.88
RPN1YHR027C MBP1P39678 833 aa3.29□□□□□ -1.88
RPN1YHR027C GDH3P39708 457 aa3.29□□□□□ -1.88
RPN1YHR027C BNA3P47039 444 aaKnown RBP3.29□□□□□ -1.88
RPN1YHR027C ENT3P47160 408 aa3.29□□□□□ -1.88
RPN1YHR027C PEX21P50091 288 aa3.29□□□□□ -1.88
RPN1YHR027C ATG1P53104 897 aa3.29□□□□□ -1.88
RPN1YHR027C COG2P53271 262 aa3.29□□□□□ -1.88
RPN1YHR027C YNR063WP53749 607 aa3.29□□□□□ -1.88
RPN1YHR027C ORC4P54791 529 aa3.29□□□□□ -1.88
RPN1YHR027C INA17Q02888 182 aa3.29□□□□□ -1.88
RPN1YHR027C SRL4Q03085 281 aa3.29□□□□□ -1.88
RPN1YHR027C GTB1Q04924 702 aa3.29□□□□□ -1.88
RPN1YHR027C YDL114WQ07530 308 aa3.29□□□□□ -1.88
RPN1YHR027C YBL111CQ3E7Y5 667 aa3.29□□□□□ -1.88
RPN1YHR027C SEY1Q99287 776 aa3.29□□□□□ -1.88
RPN1YHR027C YAK1P14680 807 aa3.28□□□□□ -1.88
RPN1YHR027C POL30P15873 258 aaKnown RBP3.28□□□□□ -1.88
RPN1YHR027C TPM1P17536 199 aaKnown RBP3.28□□□□□ -1.88
RPN1YHR027C URA4P20051 364 aa3.28□□□□□ -1.88
RPN1YHR027C CKI1P20485 582 aa3.28□□□□□ -1.88
RPN1YHR027C URE2P23202 354 aaKnown RBP3.28□□□□□ -1.88
RPN1YHR027C PXA2P34230 853 aa3.28□□□□□ -1.88
RPN1YHR027C NTH2P35172 780 aa3.28□□□□□ -1.88
RPN1YHR027C RSM22P36056 628 aa3.28□□□□□ -1.88
RPN1YHR027C VPS51P36116 164 aa3.28□□□□□ -1.88
RPN1YHR027C PFF1P38244 976 aa3.28□□□□□ -1.88
RPN1YHR027C CCT6P39079 546 aa3.28□□□□□ -1.88
RPN1YHR027C PTP3P40048 928 aa3.28□□□□□ -1.88
RPN1YHR027C SHQ1P40486 507 aaPredicted RBP3.28□□□□□ -1.88
RPN1YHR027C YJL055WP47044 245 aa3.28□□□□□ -1.88
RPN1YHR027C GPI8P49018 411 aa3.28□□□□□ -1.88
RPN1YHR027C PAN2P53010 1115 aaPredicted RBP3.28□□□□□ -1.88
RPN1YHR027C AAD16Q02895 342 aa3.28□□□□□ -1.88
RPN1YHR027C RVB1Q03940 463 aaKnown RBP3.28□□□□□ -1.88
RPN1YHR027C VTI1Q04338 217 aa3.28□□□□□ -1.88
RPN1YHR027C DXO1Q06349 442 aa3.28□□□□□ -1.88
RPN1YHR027C SMC5Q08204 1093 aa3.28□□□□□ -1.88
RPN1YHR027C SAM3Q08986 587 aa3.28□□□□□ -1.88
RPN1YHR027C TRM8Q12009 286 aa3.28□□□□□ -1.88
RPN1YHR027C ATG29Q12092 213 aa3.28□□□□□ -1.88
RPN1YHR027C GYP5Q12344 894 aa3.28□□□□□ -1.88
RPN1YHR027C MDM20Q12387 796 aaKnown RBP3.28□□□□□ -1.88
RPN1YHR027C TCB1Q12466 1186 aa3.28□□□□□ -1.88
RPN1YHR027C CDC19P00549 500 aaKnown RBP3.28□□□□□ -1.88
RPN1YHR027C KAR2P16474 682 aaKnown RBP3.28□□□□□ -1.88
RPN1YHR027C ALG1P16661 449 aa3.28□□□□□ -1.88
RPN1YHR027C FAS2P19097 1887 aaKnown RBP3.28□□□□□ -1.88
RPN1YHR027C CLB3P24870 427 aa3.28□□□□□ -1.88
RPN1YHR027C VMA8P32610 256 aaKnown RBP3.28□□□□□ -1.88
RPN1YHR027C FAR7P43592 221 aa3.28□□□□□ -1.88
RPN1YHR027C KAP114P53067 1004 aa3.28□□□□□ -1.88
RPN1YHR027C LIF1P53150 421 aa3.28□□□□□ -1.88
RPN1YHR027C CWC25P53854 179 aaKnown RBP3.28□□□□□ -1.88
RPN1YHR027C FYV6P53913 173 aa3.28□□□□□ -1.88
RPN1YHR027C ISU1Q03020 165 aa3.28□□□□□ -1.88
RPN1YHR027C SRT1Q03175 343 aa3.28□□□□□ -1.88
RPN1YHR027C GCN5Q03330 439 aa3.28□□□□□ -1.88
RPN1YHR027C GLO2Q05584 274 aa3.28□□□□□ -1.88
RPN1YHR027C YLR287CQ05881 355 aa3.28□□□□□ -1.88
RPN1YHR027C SGT1Q08446 395 aa3.28□□□□□ -1.88
RPN1YHR027C YDL109CQ12103 647 aa3.28□□□□□ -1.88
RPN1YHR027C MNL2Q12205 849 aa3.28□□□□□ -1.88
RPN1YHR027C COQ4O13525 335 aa3.27□□□□□ -1.89
RPN1YHR027C SEC63P14906 663 aa3.27□□□□□ -1.89
RPN1YHR027C LCB1P25045 558 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C TPO5P36029 618 aa3.27□□□□□ -1.89
RPN1YHR027C YBR225WP38321 900 aa3.27□□□□□ -1.89
RPN1YHR027C CCT2P39076 527 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C OAF1P39720 1047 aaPredicted RBP3.27□□□□□ -1.89
RPN1YHR027C SMX2P40204 77 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C JEM1P40358 645 aa3.27□□□□□ -1.89
RPN1YHR027C SPO22P40511 975 aa3.27□□□□□ -1.89
RPN1YHR027C SBE2P42223 864 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C FMP33P46998 180 aa3.27□□□□□ -1.89
RPN1YHR027C YGR122WP53272 402 aa3.27□□□□□ -1.89
RPN1YHR027C MMT1Q03218 510 aa3.27□□□□□ -1.89
RPN1YHR027C TFB3Q03290 321 aa3.27□□□□□ -1.89
RPN1YHR027C DON1Q05610 365 aa3.27□□□□□ -1.89
RPN1YHR027C RGA2Q06407 1009 aa3.27□□□□□ -1.89
RPN1YHR027C DIS3Q08162 1001 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C RPL24AP04449 155 aaKnown RBP3.27□□□□□ -1.89
RPN1YHR027C MPH2P0CD99 609 aa3.27□□□□□ -1.89
RPN1YHR027C MTF2P10849 440 aa3.27□□□□□ -1.89
RPN1YHR027C KAR1P11927 433 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 232.3 ms