RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTI1	YGR156W	EAF1	Q06337	982 aa		4.59	□□□□□ -1.67
PTI1	YGR156W	SGO1	Q08490	590 aa		4.59	□□□□□ -1.67
PTI1	YGR156W	BNR1	P40450	1375 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	YLR415C	O13578	112 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	PRC1	P00729	532 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	DMC1	P25453	334 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	SAP190	P36123	1033 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	IMO32	P53219	342 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	DNM1	P54861	757 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	RSC3	Q06639	885 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	IRC13	Q08630	104 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	ENV7	Q12003	364 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	YGR161W-C	Q3E744	92 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	YNL162W-A	Q3E7A8	72 aa		4.58	□□□□□ -1.68
PTI1	YGR156W	NOP14	Q99207	810 aa	Known RBP	4.58	□□□□□ -1.68
PTI1	YGR156W	LAT1	P12695	482 aa	Known RBP	4.57	□□□□□ -1.68
PTI1	YGR156W	DAL7	P21826	554 aa		4.57	□□□□□ -1.68
PTI1	YGR156W	TSR4	P25040	408 aa		4.57	□□□□□ -1.68
PTI1	YGR156W	ARE1	P25628	610 aa		4.57	□□□□□ -1.68
PTI1	YGR156W	TOM20	P35180	183 aa		4.57	□□□□□ -1.68
PTI1	YGR156W	PET10	P36139	283 aa		4.57	□□□□□ -1.68
PTI1	YGR156W	UGO1	Q03327	502 aa		4.57	□□□□□ -1.68
PTI1	YGR156W	NTG2	Q08214	380 aa		4.57	□□□□□ -1.68
PTI1	YGR156W	YOR022C	Q12204	715 aa		4.57	□□□□□ -1.68
PTI1	YGR156W	SSB1	P11484	613 aa	Known RBP	4.56	□□□□□ -1.68
PTI1	YGR156W	SSB2	P40150	613 aa	Known RBP	4.56	□□□□□ -1.68
PTI1	YGR156W	HUL4	P40985	892 aa		4.56	□□□□□ -1.68
PTI1	YGR156W	AFT2	Q08957	416 aa		4.56	□□□□□ -1.68
PTI1	YGR156W	HBN1	Q96VH4	193 aa		4.56	□□□□□ -1.68
PTI1	YGR156W	MDS3	P53094	1487 aa		4.56	□□□□□ -1.68
PTI1	YGR156W	MSD1	P15179	658 aa	Known RBP	4.55	□□□□□ -1.68
PTI1	YGR156W	RPL8A	P17076	256 aa	Known RBP	4.55	□□□□□ -1.68
PTI1	YGR156W	MDM10	P18409	493 aa		4.55	□□□□□ -1.68
PTI1	YGR156W	GDH3	P39708	457 aa		4.55	□□□□□ -1.68
PTI1	YGR156W	FMP52	P40008	231 aa		4.55	□□□□□ -1.68
PTI1	YGR156W	ZDS1	P50111	915 aa	Known RBP	4.55	□□□□□ -1.68
PTI1	YGR156W	YNR029C	P53729	429 aa	Known RBP	4.55	□□□□□ -1.68
PTI1	YGR156W	REV3	P14284	1504 aa		4.55	□□□□□ -1.68
PTI1	YGR156W	PFA3	P42836	336 aa		4.54	□□□□□ -1.68
PTI1	YGR156W	TEL2	P53038	688 aa		4.54	□□□□□ -1.68
PTI1	YGR156W	ATG11	Q12527	1178 aa		4.54	□□□□□ -1.68
PTI1	YGR156W	TOP3	P13099	656 aa		4.53	□□□□□ -1.68
PTI1	YGR156W	ENP1	P38333	483 aa	Known RBP	4.53	□□□□□ -1.68
PTI1	YGR156W	PAF1	P38351	445 aa		4.53	□□□□□ -1.68
PTI1	YGR156W	REV7	P38927	245 aa		4.53	□□□□□ -1.68
PTI1	YGR156W	YAP1802	P53309	568 aa		4.53	□□□□□ -1.68
PTI1	YGR156W	APM1	Q00776	475 aa	Predicted RBP	4.53	□□□□□ -1.68
PTI1	YGR156W	ARO10	Q06408	635 aa		4.53	□□□□□ -1.68
PTI1	YGR156W	YDL124W	Q07551	312 aa	Known RBP	4.53	□□□□□ -1.68
PTI1	YGR156W	MDM12	Q92328	271 aa		4.53	□□□□□ -1.68
PTI1	YGR156W	HIR3	P47171	1648 aa		4.53	□□□□□ -1.68
PTI1	YGR156W	TOP1	P04786	769 aa		4.52	□□□□□ -1.69
PTI1	YGR156W	SPO11	P23179	398 aa		4.52	□□□□□ -1.69
PTI1	YGR156W	PEX6	P33760	1030 aa		4.52	□□□□□ -1.69
PTI1	YGR156W	YBR259W	P38338	688 aa		4.52	□□□□□ -1.69
PTI1	YGR156W	BCD1	P38772	366 aa		4.52	□□□□□ -1.69
PTI1	YGR156W	CRP1	P38845	465 aa	Known RBP	4.52	□□□□□ -1.69
PTI1	YGR156W	YJL206C	P39529	758 aa		4.52	□□□□□ -1.69
PTI1	YGR156W	MTR3	P48240	250 aa	Predicted RBP	4.52	□□□□□ -1.69
PTI1	YGR156W	TAD1	P53065	400 aa		4.52	□□□□□ -1.69
PTI1	YGR156W	TGL5	Q12043	749 aa		4.52	□□□□□ -1.69
PTI1	YGR156W	SET5	P38890	526 aa	Known RBP	4.51	□□□□□ -1.69
PTI1	YGR156W	UBP6	P43593	499 aa	Known RBP	4.51	□□□□□ -1.69
PTI1	YGR156W	UBC11	P52492	156 aa		4.51	□□□□□ -1.69
PTI1	YGR156W	LRS4	Q04087	347 aa	Known RBP	4.51	□□□□□ -1.69
PTI1	YGR156W	YDR514C	Q04408	483 aa		4.51	□□□□□ -1.69
PTI1	YGR156W	REH1	Q06709	432 aa		4.51	□□□□□ -1.69
PTI1	YGR156W	YLR001C	Q07895	862 aa		4.51	□□□□□ -1.69
PTI1	YGR156W	PEP1	P32319	1579 aa		4.51	□□□□□ -1.69
PTI1	YGR156W	ADR1	P07248	1323 aa		4.5	□□□□□ -1.69
PTI1	YGR156W	YCL002C	P25565	263 aa		4.5	□□□□□ -1.69
PTI1	YGR156W	ADY2	P25613	283 aa		4.5	□□□□□ -1.69
PTI1	YGR156W	EMC3	P36039	253 aa		4.5	□□□□□ -1.69
PTI1	YGR156W	FLO10	P36170	1169 aa		4.5	□□□□□ -1.69
PTI1	YGR156W	YEN1	P40028	759 aa		4.5	□□□□□ -1.69
PTI1	YGR156W	SHR5	P41912	237 aa		4.5	□□□□□ -1.69
PTI1	YGR156W	SMX3	P54999	86 aa	Predicted RBP	4.5	□□□□□ -1.69
PTI1	YGR156W	RPN13	O13563	156 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	MEF1	P25039	761 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	MRC1	P25588	1096 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	HOS4	P40480	1083 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	YJR008W	P47085	338 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	YBP2	P53169	641 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	YNL193W	P53870	558 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	TFB2	Q02939	513 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	GAD1	Q04792	585 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	ASM4	Q05166	528 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	THI7	Q05998	598 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	THI21	Q08975	551 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	ICT1	Q12385	394 aa		4.49	□□□□□ -1.69
PTI1	YGR156W	SIC1	P38634	284 aa		4.48	□□□□□ -1.69
PTI1	YGR156W	NDC80	P40460	691 aa		4.48	□□□□□ -1.69
PTI1	YGR156W	RTS3	P53289	263 aa		4.48	□□□□□ -1.69
PTI1	YGR156W	YGR283C	P53336	341 aa	Predicted RBP	4.48	□□□□□ -1.69
PTI1	YGR156W	YAP7	Q08182	245 aa		4.48	□□□□□ -1.69
PTI1	YGR156W	GLG1	P36143	616 aa		4.47	□□□□□ -1.69
PTI1	YGR156W	NOP2	P40991	618 aa	Known RBP	4.47	□□□□□ -1.69
PTI1	YGR156W	TY4A-J	P47023	414 aa		4.47	□□□□□ -1.69
PTI1	YGR156W	CTR1	P49573	406 aa		4.47	□□□□□ -1.69
PTI1	YGR156W	TOM70	P07213	617 aa	Known RBP	4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 138.7 ms