RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN3	YER021W	RSC3	Q06639	885 aa		4.06	□□□□□ -1.76
RPN3	YER021W	REH1	Q06709	432 aa		4.06	□□□□□ -1.76
RPN3	YER021W	HAL9	Q12180	1030 aa		4.06	□□□□□ -1.76
RPN3	YER021W	SED4	P25365	1065 aa		4.05	□□□□□ -1.76
RPN3	YER021W	CTF8	P38877	133 aa		4.05	□□□□□ -1.76
RPN3	YER021W	SDP1	P40479	209 aa		4.05	□□□□□ -1.76
RPN3	YER021W	POB3	Q04636	552 aa	Known RBP	4.05	□□□□□ -1.76
RPN3	YER021W	NTG2	Q08214	380 aa		4.05	□□□□□ -1.76
RPN3	YER021W	YOR022C	Q12204	715 aa		4.05	□□□□□ -1.76
RPN3	YER021W	YRF1-2	P40105	1681 aa		4.04	□□□□□ -1.76
RPN3	YER021W	CDC9	P04819	755 aa		4.04	□□□□□ -1.76
RPN3	YER021W	STE11	P23561	717 aa		4.04	□□□□□ -1.76
RPN3	YER021W	PER1	P25625	357 aa		4.04	□□□□□ -1.76
RPN3	YER021W	MTC2	P34246	357 aa		4.04	□□□□□ -1.76
RPN3	YER021W	HXT16	P47185	567 aa		4.04	□□□□□ -1.76
RPN3	YER021W	PUS2	P53167	370 aa		4.04	□□□□□ -1.76
RPN3	YER021W	UGO1	Q03327	502 aa		4.04	□□□□□ -1.76
RPN3	YER021W	TAD3	Q9URQ3	322 aa		4.04	□□□□□ -1.76
RPN3	YER021W	VBA3	P25594	458 aa		4.03	□□□□□ -1.76
RPN3	YER021W	CTS1	P29029	562 aa		4.03	□□□□□ -1.76
RPN3	YER021W	PEX6	P33760	1030 aa		4.03	□□□□□ -1.76
RPN3	YER021W	DSS1	P39112	969 aa		4.03	□□□□□ -1.76
RPN3	YER021W	EXG2	P52911	562 aa		4.03	□□□□□ -1.76
RPN3	YER021W	MCM6	P53091	1017 aa	Known RBP	4.03	□□□□□ -1.76
RPN3	YER021W	DUS1	P53759	423 aa	Known RBP	4.03	□□□□□ -1.76
RPN3	YER021W	SLU7	Q02775	382 aa	Known RBP	4.03	□□□□□ -1.76
RPN3	YER021W	YBR182C-A	Q8TGU6	64 aa		4.03	□□□□□ -1.76
RPN3	YER021W	BCK1	Q01389	1478 aa		4.03	□□□□□ -1.76
RPN3	YER021W	PRC1	P00729	532 aa		4.02	□□□□□ -1.77
RPN3	YER021W	MCD4	P36051	919 aa		4.02	□□□□□ -1.77
RPN3	YER021W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
RPN3	YER021W	MNN10	P50108	393 aa	Known RBP	4.02	□□□□□ -1.77
RPN3	YER021W	THI21	Q08975	551 aa		4.02	□□□□□ -1.77
RPN3	YER021W	GSY1	P23337	708 aa		4.02	□□□□□ -1.77
RPN3	YER021W	KAR4	P25583	335 aa		4.02	□□□□□ -1.77
RPN3	YER021W	SEC21	P32074	935 aa	Known RBP	4.02	□□□□□ -1.77
RPN3	YER021W	SAP190	P36123	1033 aa		4.02	□□□□□ -1.77
RPN3	YER021W	SHM2	P37291	469 aa	Known RBP	4.02	□□□□□ -1.77
RPN3	YER021W	YHR078W	P38799	552 aa		4.02	□□□□□ -1.77
RPN3	YER021W	SET5	P38890	526 aa	Known RBP	4.02	□□□□□ -1.77
RPN3	YER021W	MNN1	P39106	762 aa		4.02	□□□□□ -1.77
RPN3	YER021W	RLP7	P40693	322 aa	Known RBP	4.02	□□□□□ -1.77
RPN3	YER021W	LAS17	Q12446	633 aa		4.02	□□□□□ -1.77
RPN3	YER021W	SRD1	P09007	221 aa		4.01	□□□□□ -1.77
RPN3	YER021W	MSS4	P38994	779 aa		4.01	□□□□□ -1.77
RPN3	YER021W	CAF16	P43569	289 aa		4.01	□□□□□ -1.77
RPN3	YER021W	ALY2	P47029	1046 aa		4.01	□□□□□ -1.77
RPN3	YER021W	YDR338C	Q05497	695 aa		4.01	□□□□□ -1.77
RPN3	YER021W	DIF1	O13577	133 aa		4	□□□□□ -1.77
RPN3	YER021W	TUB3	P09734	445 aa	Known RBP	4	□□□□□ -1.77
RPN3	YER021W	DCG1	P32460	244 aa		4	□□□□□ -1.77
RPN3	YER021W	STO1	P34160	861 aa	Known RBP	4	□□□□□ -1.77
RPN3	YER021W	SHR5	P41912	237 aa		4	□□□□□ -1.77
RPN3	YER021W	ZDS1	P50111	915 aa	Known RBP	4	□□□□□ -1.77
RPN3	YER021W	GUP2	Q08929	609 aa		4	□□□□□ -1.77
RPN3	YER021W	PMA1	P05030	918 aa	Known RBP	3.99	□□□□□ -1.77
RPN3	YER021W	PRP4	P20053	465 aa	Known RBP	3.99	□□□□□ -1.77
RPN3	YER021W	PDR11	P40550	1411 aa		3.99	□□□□□ -1.77
RPN3	YER021W	SSY5	P47002	699 aa		3.99	□□□□□ -1.77
RPN3	YER021W	PHO23	P50947	330 aa		3.99	□□□□□ -1.77
RPN3	YER021W	SNP1	Q00916	300 aa	Predicted RBP	3.99	□□□□□ -1.77
RPN3	YER021W	TFB2	Q02939	513 aa		3.99	□□□□□ -1.77
RPN3	YER021W	ENB1	Q08299	606 aa		3.99	□□□□□ -1.77
RPN3	YER021W	NOP14	Q99207	810 aa	Known RBP	3.99	□□□□□ -1.77
RPN3	YER021W	PCL2	P25693	308 aa		3.98	□□□□□ -1.77
RPN3	YER021W	ZIP2	P53061	704 aa		3.98	□□□□□ -1.77
RPN3	YER021W	GSF2	Q04697	403 aa	Known RBP	3.98	□□□□□ -1.77
RPN3	YER021W	CRR1	Q05790	422 aa		3.98	□□□□□ -1.77
RPN3	YER021W	PEX19	Q07418	342 aa		3.98	□□□□□ -1.77
RPN3	YER021W	RAD18	P10862	487 aa		3.97	□□□□□ -1.77
RPN3	YER021W	RPL8A	P17076	256 aa	Known RBP	3.97	□□□□□ -1.77
RPN3	YER021W	MIH1	P23748	554 aa		3.97	□□□□□ -1.77
RPN3	YER021W	CAD1	P24813	409 aa	Known RBP	3.97	□□□□□ -1.77
RPN3	YER021W	HCM1	P25364	564 aa		3.97	□□□□□ -1.77
RPN3	YER021W	SAK1	P38990	1142 aa		3.97	□□□□□ -1.77
RPN3	YER021W	VHR1	P40522	640 aa		3.97	□□□□□ -1.77
RPN3	YER021W	BUL1	P48524	976 aa		3.97	□□□□□ -1.77
RPN3	YER021W	ASI2	P53895	289 aa		3.97	□□□□□ -1.77
RPN3	YER021W	MUS81	Q04149	632 aa	Predicted RBP	3.97	□□□□□ -1.77
RPN3	YER021W	YLR001C	Q07895	862 aa		3.97	□□□□□ -1.77
RPN3	YER021W	NTO1	Q12311	748 aa		3.97	□□□□□ -1.77
RPN3	YER021W	GPR1	Q12361	961 aa		3.97	□□□□□ -1.77
RPN3	YER021W	SWM1	Q12379	170 aa		3.97	□□□□□ -1.77
RPN3	YER021W	AIM44	Q99299	758 aa		3.97	□□□□□ -1.77
RPN3	YER021W	PFK1	P16861	987 aa	Known RBP	3.97	□□□□□ -1.77
RPN3	YER021W	HOG1	P32485	435 aa		3.97	□□□□□ -1.77
RPN3	YER021W	SPC42	P36094	363 aa		3.97	□□□□□ -1.77
RPN3	YER021W	PZF1	P39933	429 aa		3.97	□□□□□ -1.77
RPN3	YER021W	PFA3	P42836	336 aa		3.97	□□□□□ -1.77
RPN3	YER021W	DNM1	P54861	757 aa		3.97	□□□□□ -1.77
RPN3	YER021W	ASM4	Q05166	528 aa		3.97	□□□□□ -1.77
RPN3	YER021W	PDR5	P33302	1511 aa	Known RBP	3.96	□□□□□ -1.78
RPN3	YER021W	CTF13	P35203	478 aa		3.96	□□□□□ -1.78
RPN3	YER021W	YPT53	P36019	220 aa		3.96	□□□□□ -1.78
RPN3	YER021W	RPN10	P38886	268 aa	Known RBP	3.96	□□□□□ -1.78
RPN3	YER021W	MRPS35	P53292	345 aa		3.96	□□□□□ -1.78
RPN3	YER021W	YNL193W	P53870	558 aa		3.96	□□□□□ -1.78
RPN3	YER021W	ERG5	P54781	538 aa		3.96	□□□□□ -1.78
RPN3	YER021W	DOS2	P54858	310 aa		3.96	□□□□□ -1.78
RPN3	YER021W	NHX1	Q04121	633 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms