RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W COS5P47187 383 aa6.54□□□□□ -1.36
RPT3YDR394W NBP1P52919 319 aaPredicted RBP6.54□□□□□ -1.36
RPT3YDR394W LIF1P53150 421 aa6.54□□□□□ -1.36
RPT3YDR394W ENV11P53246 860 aa6.54□□□□□ -1.36
RPT3YDR394W RRB1Q04225 511 aaKnown RBP6.54□□□□□ -1.36
RPT3YDR394W POB3Q04636 552 aaKnown RBP6.54□□□□□ -1.36
RPT3YDR394W CUR1Q06469 252 aa6.54□□□□□ -1.36
RPT3YDR394W YPL277CQ08989 487 aa6.54□□□□□ -1.36
RPT3YDR394W ARP6Q12509 438 aa6.54□□□□□ -1.36
RPT3YDR394W SRD1P09007 221 aa6.53□□□□□ -1.36
RPT3YDR394W IDI1P15496 288 aa6.53□□□□□ -1.36
RPT3YDR394W HPR1P17629 752 aaKnown RBP6.53□□□□□ -1.36
RPT3YDR394W PRP22P24384 1145 aaKnown RBP6.53□□□□□ -1.36
RPT3YDR394W GIP1P38229 639 aa6.53□□□□□ -1.36
RPT3YDR394W SMF1P38925 575 aa6.53□□□□□ -1.36
RPT3YDR394W UBP5P39944 805 aa6.53□□□□□ -1.36
RPT3YDR394W GIR2Q03768 265 aaPredicted RBP6.53□□□□□ -1.36
RPT3YDR394W SOV1Q04748 898 aa6.53□□□□□ -1.36
RPT3YDR394W PHM6Q05637 104 aa6.53□□□□□ -1.36
RPT3YDR394W YDL057WQ07379 328 aa6.53□□□□□ -1.36
RPT3YDR394W GUD1Q07729 489 aa6.53□□□□□ -1.36
RPT3YDR394W YKL068W-AQ3E826 78 aa6.53□□□□□ -1.36
RPT3YDR394W TY1B-AO13527 1196 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W CBP1P07252 654 aa6.52□□□□□ -1.37
RPT3YDR394W RAD18P10862 487 aa6.52□□□□□ -1.37
RPT3YDR394W TUP1P16649 713 aa6.52□□□□□ -1.37
RPT3YDR394W NIP100P33420 868 aa6.52□□□□□ -1.37
RPT3YDR394W NDT80P38830 627 aa6.52□□□□□ -1.37
RPT3YDR394W MAD1P40957 749 aa6.52□□□□□ -1.37
RPT3YDR394W FET4P40988 552 aa6.52□□□□□ -1.37
RPT3YDR394W GPD2P41911 440 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W SGM1P47166 707 aa6.52□□□□□ -1.37
RPT3YDR394W BTN2P53286 410 aa6.52□□□□□ -1.37
RPT3YDR394W ALD6P54115 500 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W YMR187CQ03236 431 aa6.52□□□□□ -1.37
RPT3YDR394W TSR1Q07381 788 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W NOP6Q07623 225 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W WHI4Q07655 649 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W NUR1Q12066 484 aa6.52□□□□□ -1.37
RPT3YDR394W FAL1Q12099 399 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W RMP1Q12530 201 aa6.52□□□□□ -1.37
RPT3YDR394W MYO1P08964 1928 aa6.52□□□□□ -1.37
RPT3YDR394W MRP10O75012 95 aa6.51□□□□□ -1.37
RPT3YDR394W PGK1P00560 416 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W CDC8P00572 216 aa6.51□□□□□ -1.37
RPT3YDR394W TCP1P12612 559 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W KRS1P15180 591 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W YCK2P23292 546 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W PER1P25625 357 aa6.51□□□□□ -1.37
RPT3YDR394W MUD2P36084 527 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W TDA3P38758 523 aa6.51□□□□□ -1.37
RPT3YDR394W SKN7P38889 622 aa6.51□□□□□ -1.37
RPT3YDR394W ACA1P39970 489 aa6.51□□□□□ -1.37
RPT3YDR394W HXT8P40886 569 aa6.51□□□□□ -1.37
RPT3YDR394W CCT8P47079 568 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W YGR021WP53212 290 aa6.51□□□□□ -1.37
RPT3YDR394W TOF1P53840 1238 aa6.51□□□□□ -1.37
RPT3YDR394W VTC3Q02725 835 aa6.51□□□□□ -1.37
RPT3YDR394W YML037CQ03703 340 aa6.51□□□□□ -1.37
RPT3YDR394W MLH2Q07980 695 aa6.51□□□□□ -1.37
RPT3YDR394W YDR215CQ12240 137 aa6.51□□□□□ -1.37
RPT3YDR394W CSR2Q12734 1121 aa6.51□□□□□ -1.37
RPT3YDR394W PHR1P05066 565 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
RPT3YDR394W SWI6P09959 803 aa6.5□□□□□ -1.37
RPT3YDR394W PHO8P11491 566 aa6.5□□□□□ -1.37
RPT3YDR394W CLN3P13365 580 aa6.5□□□□□ -1.37
RPT3YDR394W DAL7P21826 554 aa6.5□□□□□ -1.37
RPT3YDR394W MSN1P22148 382 aa6.5□□□□□ -1.37
RPT3YDR394W NAR1P23503 491 aaKnown RBP6.5□□□□□ -1.37
RPT3YDR394W MSH1P25846 959 aa6.5□□□□□ -1.37
RPT3YDR394W SMC1P32908 1225 aa6.5□□□□□ -1.37
RPT3YDR394W XRS2P33301 854 aa6.5□□□□□ -1.37
RPT3YDR394W TGL1P34163 548 aa6.5□□□□□ -1.37
RPT3YDR394W JNM1P36224 373 aa6.5□□□□□ -1.37
RPT3YDR394W PGM2P37012 569 aaKnown RBP6.5□□□□□ -1.37
RPT3YDR394W UBP13P38187 747 aa6.5□□□□□ -1.37
RPT3YDR394W ALG14P38242 237 aa6.5□□□□□ -1.37
RPT3YDR394W RPN3P40016 523 aaKnown RBP6.5□□□□□ -1.37
RPT3YDR394W TAD1P53065 400 aa6.5□□□□□ -1.37
RPT3YDR394W ESBP6P53918 673 aa6.5□□□□□ -1.37
RPT3YDR394W RNT1Q02555 471 aa6.5□□□□□ -1.37
RPT3YDR394W VTI1Q04338 217 aa6.5□□□□□ -1.37
RPT3YDR394W YLR297WQ05899 129 aa6.5□□□□□ -1.37
RPT3YDR394W SPH1Q06160 661 aa6.5□□□□□ -1.37
RPT3YDR394W CSR1Q06705 408 aaKnown RBP6.5□□□□□ -1.37
RPT3YDR394W RLP24Q07915 199 aaKnown RBP6.5□□□□□ -1.37
RPT3YDR394W RPB10P22139 70 aa6.49□□□□□ -1.37
RPT3YDR394W PAP1P29468 568 aaKnown RBP6.49□□□□□ -1.37
RPT3YDR394W GCG1P32656 232 aaKnown RBP6.49□□□□□ -1.37
RPT3YDR394W SET5P38890 526 aaKnown RBP6.49□□□□□ -1.37
RPT3YDR394W YMR124WP39523 943 aaKnown RBP6.49□□□□□ -1.37
RPT3YDR394W BOL3P39724 118 aa6.49□□□□□ -1.37
RPT3YDR394W FIS1P40515 155 aa6.49□□□□□ -1.37
RPT3YDR394W MMM1P41800 426 aa6.49□□□□□ -1.37
RPT3YDR394W CWC22P53333 577 aaKnown RBP6.49□□□□□ -1.37
RPT3YDR394W DIP5P53388 608 aa6.49□□□□□ -1.37
RPT3YDR394W PTA1Q01329 785 aaPredicted RBP6.49□□□□□ -1.37
RPT3YDR394W YLR001CQ07895 862 aa6.49□□□□□ -1.37
RPT3YDR394W RRN6P32786 894 aa6.48□□□□□ -1.37
RPT3YDR394W YSC83P32792 385 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms