RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W URA1P28272 314 aaPredicted RBP1.56□□□□□ -2.16
MSN5YDR335W SPC29P33419 253 aa1.56□□□□□ -2.16
MSN5YDR335W WHI3P34761 661 aaKnown RBP1.56□□□□□ -2.16
MSN5YDR335W NUP120P35729 1037 aa1.56□□□□□ -2.16
MSN5YDR335W RMA1P36001 430 aaKnown RBP1.56□□□□□ -2.16
MSN5YDR335W YKL077WP36081 392 aa1.56□□□□□ -2.16
MSN5YDR335W TIF5P38431 405 aaKnown RBP1.56□□□□□ -2.16
MSN5YDR335W RPN10P38886 268 aaKnown RBP1.56□□□□□ -2.16
MSN5YDR335W IES5P40060 125 aa1.56□□□□□ -2.16
MSN5YDR335W SEC26P41810 973 aaKnown RBP1.56□□□□□ -2.16
MSN5YDR335W ALG2P43636 503 aa1.56□□□□□ -2.16
MSN5YDR335W ALY2P47029 1046 aa1.56□□□□□ -2.16
MSN5YDR335W YLR287CQ05881 355 aa1.56□□□□□ -2.16
MSN5YDR335W EST2Q06163 884 aa1.56□□□□□ -2.16
MSN5YDR335W SGT2Q12118 346 aaKnown RBP1.56□□□□□ -2.16
MSN5YDR335W BI4P03879 638 aa1.56□□□□□ -2.16
MSN5YDR335W CDC31P06704 161 aaKnown RBP1.56□□□□□ -2.16
MSN5YDR335W SEG2P34250 1132 aa1.56□□□□□ -2.16
MSN5YDR335W BYE1P36106 594 aa1.56□□□□□ -2.16
MSN5YDR335W TOS1P38288 455 aa1.56□□□□□ -2.16
MSN5YDR335W PAF1P38351 445 aa1.56□□□□□ -2.16
MSN5YDR335W OAF1P39720 1047 aaPredicted RBP1.56□□□□□ -2.16
MSN5YDR335W FAF1P40546 346 aaPredicted RBP1.56□□□□□ -2.16
MSN5YDR335W FET4P40988 552 aa1.56□□□□□ -2.16
MSN5YDR335W YFL052WP43551 465 aa1.56□□□□□ -2.16
MSN5YDR335W FYV8P46949 817 aaKnown RBP1.56□□□□□ -2.16
MSN5YDR335W YJL055WP47044 245 aa1.56□□□□□ -2.16
MSN5YDR335W VPS53P47061 822 aa1.56□□□□□ -2.16
MSN5YDR335W SLD3P53135 668 aa1.56□□□□□ -2.16
MSN5YDR335W ART5P53244 586 aaKnown RBP1.56□□□□□ -2.16
MSN5YDR335W MEP3P53390 489 aa1.56□□□□□ -2.16
MSN5YDR335W ELA1P53861 379 aaPredicted RBP1.56□□□□□ -2.16
MSN5YDR335W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
MSN5YDR335W PSR1Q07800 427 aa1.56□□□□□ -2.16
MSN5YDR335W PSR2Q07949 397 aa1.56□□□□□ -2.16
MSN5YDR335W MED1Q12321 566 aa1.56□□□□□ -2.16
MSN5YDR335W HSP42Q12329 375 aa1.56□□□□□ -2.16
MSN5YDR335W DBP10Q12389 995 aaKnown RBP1.56□□□□□ -2.16
MSN5YDR335W MKK2P32491 506 aa1.55□□□□□ -2.16
MSN5YDR335W GPP2P40106 250 aaKnown RBP1.55□□□□□ -2.16
MSN5YDR335W PSF2P40359 213 aa1.55□□□□□ -2.16
MSN5YDR335W PFD1P46988 109 aa1.55□□□□□ -2.16
MSN5YDR335W FOL2P51601 243 aaKnown RBP1.55□□□□□ -2.16
MSN5YDR335W NUT1P53114 1132 aa1.55□□□□□ -2.16
MSN5YDR335W CBK1P53894 756 aa1.55□□□□□ -2.16
MSN5YDR335W TGL2P54857 326 aa1.55□□□□□ -2.16
MSN5YDR335W SDH1Q00711 640 aa1.55□□□□□ -2.16
MSN5YDR335W YPL034WQ03083 165 aa1.55□□□□□ -2.16
MSN5YDR335W TIF35Q04067 274 aaKnown RBP1.55□□□□□ -2.16
MSN5YDR335W HDA2Q06629 674 aa1.55□□□□□ -2.16
MSN5YDR335W ESC8Q08119 714 aa1.55□□□□□ -2.16
MSN5YDR335W YTM1Q12024 460 aaPredicted RBP1.55□□□□□ -2.16
MSN5YDR335W POL1P13382 1468 aa1.55□□□□□ -2.16
MSN5YDR335W YOR1P53049 1477 aa1.55□□□□□ -2.16
MSN5YDR335W ADE8P04161 214 aa1.55□□□□□ -2.16
MSN5YDR335W RED1P14291 827 aa1.55□□□□□ -2.16
MSN5YDR335W KNS1P32350 737 aaPredicted RBP1.55□□□□□ -2.16
MSN5YDR335W APE3P37302 537 aaKnown RBP1.55□□□□□ -2.16
MSN5YDR335W CKB2P38930 258 aa1.55□□□□□ -2.16
MSN5YDR335W SAW1P39735 261 aa1.55□□□□□ -2.16
MSN5YDR335W RVS167P39743 482 aaKnown RBP1.55□□□□□ -2.16
MSN5YDR335W AFG3P39925 761 aa1.55□□□□□ -2.16
MSN5YDR335W KHA1P40309 873 aa1.55□□□□□ -2.16
MSN5YDR335W VHR1P40522 640 aa1.55□□□□□ -2.16
MSN5YDR335W NRD1P53617 575 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
MSN5YDR335W HAS1Q03532 505 aaKnown RBP1.55□□□□□ -2.16
MSN5YDR335W YOL114CQ12322 202 aa1.55□□□□□ -2.16
MSN5YDR335W CYC7P00045 113 aa1.55□□□□□ -2.16
MSN5YDR335W HMG1P12683 1054 aa1.55□□□□□ -2.16
MSN5YDR335W SYP1P25623 870 aaKnown RBP1.55□□□□□ -2.16
MSN5YDR335W ANP1P32629 500 aa1.55□□□□□ -2.16
MSN5YDR335W RPT3P33298 428 aaKnown RBP1.55□□□□□ -2.16
MSN5YDR335W PIN4P34217 668 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
MSN5YDR335W YKR075CP36155 307 aa1.55□□□□□ -2.16
MSN5YDR335W CCZ1P38273 704 aa1.55□□□□□ -2.16
MSN5YDR335W CAJ1P39101 391 aa1.55□□□□□ -2.16
MSN5YDR335W ESL1P40456 1118 aa1.55□□□□□ -2.16
MSN5YDR335W LCB2P40970 561 aa1.55□□□□□ -2.16
MSN5YDR335W PSP2P50109 593 aaKnown RBP1.55□□□□□ -2.16
MSN5YDR335W BIO5P53744 561 aaKnown RBP1.55□□□□□ -2.16
MSN5YDR335W MOT3P54785 490 aaKnown RBP1.55□□□□□ -2.16
MSN5YDR335W RCF1Q03713 159 aa1.55□□□□□ -2.16
MSN5YDR335W YMR155WQ03795 547 aa1.55□□□□□ -2.16
MSN5YDR335W YDR514CQ04408 483 aa1.55□□□□□ -2.16
MSN5YDR335W RPS9AO13516 197 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W CHS2P14180 963 aa1.54□□□□□ -2.16
MSN5YDR335W BIT2P38346 545 aa1.54□□□□□ -2.16
MSN5YDR335W DOT5P40553 215 aa1.54□□□□□ -2.16
MSN5YDR335W UBP6P43593 499 aaKnown RBP1.54□□□□□ -2.16
MSN5YDR335W ZIP2P53061 704 aa1.54□□□□□ -2.16
MSN5YDR335W HOL1P53389 586 aa1.54□□□□□ -2.16
MSN5YDR335W TEP1P53916 434 aa1.54□□□□□ -2.16
MSN5YDR335W TIM10P87108 93 aa1.54□□□□□ -2.16
MSN5YDR335W PTA1Q01329 785 aaPredicted RBP1.54□□□□□ -2.16
MSN5YDR335W TIM50Q02776 476 aa1.54□□□□□ -2.16
MSN5YDR335W NSE5Q03718 556 aa1.54□□□□□ -2.16
MSN5YDR335W ARP9Q05123 467 aa1.54□□□□□ -2.16
MSN5YDR335W SPN1Q06505 410 aaPredicted RBP1.54□□□□□ -2.16
MSN5YDR335W PMT7Q06644 662 aa1.54□□□□□ -2.16
MSN5YDR335W MET17P06106 444 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms