RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	TPO2	P53283	614 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	NCS2	P53923	493 aa	Predicted RBP	3.55	□□□□□ -1.84
PSF1	YDR013W	URH1	Q04179	340 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	NEW1	Q08972	1196 aa	Known RBP	3.55	□□□□□ -1.84
PSF1	YDR013W	AIM41	Q12032	185 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	DAS2	Q12084	232 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	OSW2	Q12202	724 aa		3.55	□□□□□ -1.84
PSF1	YDR013W	AI3	P03877	415 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	RPS9B	P05755	195 aa	Known RBP	3.54	□□□□□ -1.84
PSF1	YDR013W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
PSF1	YDR013W	SNF1	P06782	633 aa	Known RBP	3.54	□□□□□ -1.84
PSF1	YDR013W	PPR1	P07272	904 aa	Predicted RBP	3.54	□□□□□ -1.84
PSF1	YDR013W	PCK1	P10963	549 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	PHO8	P11491	566 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	CLN3	P13365	580 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	HPR1	P17629	752 aa	Known RBP	3.54	□□□□□ -1.84
PSF1	YDR013W	DBF4	P32325	704 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	CDC11	P32458	415 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	ECM32	P32644	1121 aa	Known RBP	3.54	□□□□□ -1.84
PSF1	YDR013W	RRN6	P32786	894 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	KTR2	P33550	425 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.54	□□□□□ -1.84	not detected
PSF1	YDR013W	ECM2	P38241	364 aa	Known RBP	3.54	□□□□□ -1.84
PSF1	YDR013W	RGD1	P38339	666 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	BIM1	P40013	344 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	KAP123	P40069	1113 aa	Known RBP	3.54	□□□□□ -1.84
PSF1	YDR013W	EFM4	P40516	257 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	HXT8	P40886	569 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	MMM1	P41800	426 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	VPS53	P47061	822 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	YGR021W	P53212	290 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	BTN2	P53286	410 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	ZPR1	P53303	486 aa	Known RBP	3.54	□□□□□ -1.84
PSF1	YDR013W	SOL4	P53315	255 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	UTP6	Q02354	440 aa	Known RBP	3.54	□□□□□ -1.84
PSF1	YDR013W	GYL1	Q04322	720 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	VTI1	Q04338	217 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	SUE1	Q06524	206 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	CRD1	Q07560	283 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	NOC3	Q07896	663 aa	Predicted RBP	3.54	□□□□□ -1.84
PSF1	YDR013W	SMC5	Q08204	1093 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	SDH5	Q08230	162 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	YPL277C	Q08989	487 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	TY4A-H	Q6Q5P6	413 aa		3.54	□□□□□ -1.84
PSF1	YDR013W	CBP1	P07252	654 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	CDC33	P07260	213 aa	Known RBP	3.53	□□□□□ -1.84
PSF1	YDR013W	SRP54	P20424	541 aa	Known RBP	3.53	□□□□□ -1.84
PSF1	YDR013W	DAL7	P21826	554 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	MRPL25	P23369	157 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	PAP1	P29468	568 aa	Known RBP	3.53	□□□□□ -1.84
PSF1	YDR013W	MRE11	P32829	692 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	LIP5	P32875	414 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
PSF1	YDR013W	TFC4	P33339	1025 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	BLI1	P35727	113 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	MUD2	P36084	527 aa	Known RBP	3.53	□□□□□ -1.84
PSF1	YDR013W	HIS2	P38635	335 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	ACA1	P39970	489 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	NUP82	P40368	713 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	THI6	P41835	540 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	PXA1	P41909	870 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	RGD2	P43556	714 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
PSF1	YDR013W	HFM1	P51979	1187 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	NBP1	P52919	319 aa	Predicted RBP	3.53	□□□□□ -1.84
PSF1	YDR013W	LIF1	P53150	421 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	YNR021W	P53723	404 aa	Known RBP	3.53	□□□□□ -1.84
PSF1	YDR013W	SQS1	P53866	767 aa	Known RBP	3.53	□□□□□ -1.84
PSF1	YDR013W	YAF9	P53930	226 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	TIM8	P57744	87 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	YLR297W	Q05899	129 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	SUB2	Q07478	446 aa	Known RBP	3.53	□□□□□ -1.84
PSF1	YDR013W	NOP6	Q07623	225 aa	Known RBP	3.53	□□□□□ -1.84
PSF1	YDR013W	MED7	Q08278	222 aa		3.53	□□□□□ -1.84
PSF1	YDR013W	YPL225W	Q08971	146 aa	Known RBP	3.53	□□□□□ -1.84
PSF1	YDR013W	PGK1	P00560	416 aa	Known RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	LEU1	P07264	779 aa	Known RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	ARD1	P07347	238 aa	Predicted RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	SUP45	P12385	437 aa	Known RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	TCP1	P12612	559 aa	Known RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	ISY1	P21374	235 aa	Predicted RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	HEM3	P28789	327 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	SEC21	P32074	935 aa	Known RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	MUD1	P32605	298 aa	Known RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	TOA1	P32773	286 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	GYP6	P32806	458 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	LAS1	P36146	502 aa	Predicted RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	TRZ1	P36159	838 aa	Predicted RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	TDA3	P38758	523 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	SHC1	P39000	512 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	TIF4631	P39935	952 aa	Known RBP	3.52	□□□□□ -1.85
PSF1	YDR013W	VAB2	P40003	282 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	NIT1	P40447	199 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	YJR079W	P47126	109 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	EAF6	P47128	113 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	YML6	P51998	286 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	BOP3	P53958	396 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	EEB1	Q02891	456 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	YMR102C	Q03177	834 aa		3.52	□□□□□ -1.85
PSF1	YDR013W	NGL3	Q03210	505 aa		3.52	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms