RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W HCA4P20448 770 aaKnown RBP6.92□□□□□ -1.3
TRP1YDR007W YKR075CP36155 307 aa6.92□□□□□ -1.3
TRP1YDR007W SSY5P47002 699 aa6.92□□□□□ -1.3
TRP1YDR007W RNR4P49723 345 aaKnown RBP6.92□□□□□ -1.3
TRP1YDR007W YGR130CP53278 816 aa6.92□□□□□ -1.3
TRP1YDR007W GPD1Q00055 391 aaKnown RBP6.92□□□□□ -1.3
TRP1YDR007W YDL121CQ07541 149 aa6.92□□□□□ -1.3
TRP1YDR007W SER1P33330 395 aaKnown RBP6.91□□□□□ -1.3
TRP1YDR007W PTH2P34222 208 aa6.91□□□□□ -1.3
TRP1YDR007W ATG19P35193 415 aa6.91□□□□□ -1.3
TRP1YDR007W RPS0BP46654 252 aaKnown RBP6.91□□□□□ -1.3
TRP1YDR007W MCA1Q08601 432 aa6.91□□□□□ -1.3
TRP1YDR007W FAT1P38225 669 aa6.9□□□□□ -1.3
TRP1YDR007W HIS6P40545 261 aa6.9□□□□□ -1.3
TRP1YDR007W MND2P40577 368 aa6.9□□□□□ -1.3
TRP1YDR007W YJR039WP47107 1121 aa6.9□□□□□ -1.3
TRP1YDR007W PAP2P53632 584 aaKnown RBP6.9□□□□□ -1.3
TRP1YDR007W ECM38Q05902 660 aaPredicted RBP6.9□□□□□ -1.3
TRP1YDR007W QCR6P00127 147 aa6.89□□□□□ -1.31
TRP1YDR007W SPE1P08432 466 aa6.89□□□□□ -1.31
TRP1YDR007W MRS6P32864 603 aaKnown RBP6.89□□□□□ -1.31
TRP1YDR007W SSZ1P38788 538 aaKnown RBP6.89□□□□□ -1.31
TRP1YDR007W YHR078WP38799 552 aa6.89□□□□□ -1.31
TRP1YDR007W SKN7P38889 622 aa6.89□□□□□ -1.31
TRP1YDR007W RRP8P38961 392 aaKnown RBP6.89□□□□□ -1.31
TRP1YDR007W MTR3P48240 250 aaPredicted RBP6.89□□□□□ -1.31
TRP1YDR007W LPX1Q12405 387 aaKnown RBP6.89□□□□□ -1.31
TRP1YDR007W CYC1P00044 109 aaPredicted RBP6.88□□□□□ -1.31
TRP1YDR007W CYC7P00045 113 aa6.88□□□□□ -1.31
TRP1YDR007W GAL10P04397 699 aa6.88□□□□□ -1.31
TRP1YDR007W YKL222CP35995 705 aa6.88□□□□□ -1.31
TRP1YDR007W YHL041WP38730 149 aa6.88□□□□□ -1.31
TRP1YDR007W MIP6P38760 659 aaKnown RBP6.88□□□□□ -1.31
TRP1YDR007W CTF8P38877 133 aa6.88□□□□□ -1.31
TRP1YDR007W SDP1P40479 209 aa6.88□□□□□ -1.31
TRP1YDR007W YFR016CP43597 1233 aaKnown RBP6.88□□□□□ -1.31
TRP1YDR007W ORC4P54791 529 aa6.88□□□□□ -1.31
TRP1YDR007W ARP4P80428 489 aa6.88□□□□□ -1.31
TRP1YDR007W NOP56Q12460 504 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
TRP1YDR007W SAK1P38990 1142 aa6.87□□□□□ -1.31
TRP1YDR007W PZF1P39933 429 aa6.87□□□□□ -1.31
TRP1YDR007W NKP1Q12493 238 aa6.87□□□□□ -1.31
TRP1YDR007W SWI6P09959 803 aa6.86□□□□□ -1.31
TRP1YDR007W ATP12P22135 325 aa6.86□□□□□ -1.31
TRP1YDR007W HOL1P53389 586 aa6.86□□□□□ -1.31
TRP1YDR007W BRE5P53741 515 aaKnown RBP6.86□□□□□ -1.31
TRP1YDR007W CNM67P53865 581 aaKnown RBP6.86□□□□□ -1.31
TRP1YDR007W HIR3P47171 1648 aa6.86□□□□□ -1.31
TRP1YDR007W KTR4P38131 464 aa6.85□□□□□ -1.31
TRP1YDR007W YHR202WP38887 602 aa6.85□□□□□ -1.31
TRP1YDR007W BEM4P39011 633 aa6.85□□□□□ -1.31
TRP1YDR007W RGA2Q06407 1009 aa6.85□□□□□ -1.31
TRP1YDR007W WHI4Q07655 649 aaKnown RBP6.85□□□□□ -1.31
TRP1YDR007W TPO1Q07824 586 aa6.85□□□□□ -1.31
TRP1YDR007W PSR2Q07949 397 aa6.85□□□□□ -1.31
TRP1YDR007W STH1P32597 1359 aa6.84□□□□□ -1.31
TRP1YDR007W RPP2AP05319 106 aaKnown RBP6.84□□□□□ -1.31
TRP1YDR007W GLN4P13188 809 aaKnown RBP6.84□□□□□ -1.31
TRP1YDR007W SED4P25365 1065 aa6.84□□□□□ -1.31
TRP1YDR007W AKL1P38080 1108 aaKnown RBP6.84□□□□□ -1.31
TRP1YDR007W GTF1P53260 183 aaPredicted RBP6.84□□□□□ -1.31
TRP1YDR007W NOP15P53927 220 aaPredicted RBP6.84□□□□□ -1.31
TRP1YDR007W ORC3P54790 616 aa6.84□□□□□ -1.31
TRP1YDR007W LEE1Q02799 301 aaKnown RBP6.84□□□□□ -1.31
TRP1YDR007W TMA64Q04600 565 aaKnown RBP6.84□□□□□ -1.31
TRP1YDR007W YLR407WQ06070 228 aa6.84□□□□□ -1.31
TRP1YDR007W YOR352WQ08816 343 aa6.84□□□□□ -1.31
TRP1YDR007W MMS22Q06164 1454 aa6.84□□□□□ -1.31
TRP1YDR007W SEC3P33332 1336 aaKnown RBP6.83□□□□□ -1.32
TRP1YDR007W PHO81P17442 1178 aa6.83□□□□□ -1.32
TRP1YDR007W ICP55P40051 511 aa6.83□□□□□ -1.32
TRP1YDR007W VID28P40547 921 aa6.83□□□□□ -1.32
TRP1YDR007W SET2P46995 733 aaKnown RBP6.83□□□□□ -1.32
TRP1YDR007W YMR210WQ03649 449 aa6.83□□□□□ -1.32
TRP1YDR007W MUS81Q04149 632 aaPredicted RBP6.83□□□□□ -1.32
TRP1YDR007W UPC2Q12151 913 aa6.83□□□□□ -1.32
TRP1YDR007W MSS18P08593 268 aa6.82□□□□□ -1.32
TRP1YDR007W APA1P16550 321 aaKnown RBP6.82□□□□□ -1.32
TRP1YDR007W DBF20P32328 564 aa6.82□□□□□ -1.32
TRP1YDR007W APN2P38207 520 aa6.82□□□□□ -1.32
TRP1YDR007W ACA1P39970 489 aa6.82□□□□□ -1.32
TRP1YDR007W QRI7P43122 407 aa6.82□□□□□ -1.32
TRP1YDR007W YBP2P53169 641 aa6.82□□□□□ -1.32
TRP1YDR007W ASM4Q05166 528 aa6.82□□□□□ -1.32
TRP1YDR007W ADY3Q07732 790 aa6.82□□□□□ -1.32
TRP1YDR007W CWC2Q12046 339 aaPredicted RBP6.82□□□□□ -1.32
TRP1YDR007W YOL114CQ12322 202 aa6.82□□□□□ -1.32
TRP1YDR007W UFD4P33202 1483 aa6.81□□□□□ -1.32
TRP1YDR007W TRP3P00937 484 aa6.81□□□□□ -1.32
TRP1YDR007W HOP1P20050 605 aa6.81□□□□□ -1.32
TRP1YDR007W DGR2P32330 852 aa6.81□□□□□ -1.32
TRP1YDR007W SRP68P38687 599 aaKnown RBP6.81□□□□□ -1.32
TRP1YDR007W ETP1P38748 585 aaKnown RBP6.81□□□□□ -1.32
TRP1YDR007W URM1P40554 99 aaPredicted RBP6.81□□□□□ -1.32
TRP1YDR007W PFA3P42836 336 aa6.81□□□□□ -1.32
TRP1YDR007W MET12P46151 657 aa6.81□□□□□ -1.32
TRP1YDR007W ASK10P48361 1146 aa6.81□□□□□ -1.32
TRP1YDR007W ROT1Q03691 256 aa6.81□□□□□ -1.32
TRP1YDR007W NGL1Q08213 363 aaKnown RBP6.81□□□□□ -1.32
TRP1YDR007W SPP41P38904 1435 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms