RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W TAF10Q12030 206 aa7.39□□□□□ -1.23
NUP84YDL116W RIO1Q12196 484 aaKnown RBP7.39□□□□□ -1.23
NUP84YDL116W RRD2Q12461 358 aa7.39□□□□□ -1.23
NUP84YDL116W ADH4P10127 382 aa7.38□□□□□ -1.23
NUP84YDL116W MAK16P10962 306 aaPredicted RBP7.38□□□□□ -1.23
NUP84YDL116W SPO16P17122 198 aa7.38□□□□□ -1.23
NUP84YDL116W RAD51P25454 400 aa7.38□□□□□ -1.23
NUP84YDL116W ALA1P40825 983 aaKnown RBP7.38□□□□□ -1.23
NUP84YDL116W LCB2P40970 561 aa7.38□□□□□ -1.23
NUP84YDL116W PXA1P41909 870 aa7.38□□□□□ -1.23
NUP84YDL116W SVF1Q05515 481 aa7.38□□□□□ -1.23
NUP84YDL116W LAP2Q10740 671 aa7.38□□□□□ -1.23
NUP84YDL116W CKA2P19454 339 aa7.37□□□□□ -1.23
NUP84YDL116W VMA4P22203 233 aaKnown RBP7.37□□□□□ -1.23
NUP84YDL116W MEF1P25039 761 aa7.37□□□□□ -1.23
NUP84YDL116W YBR032WP38223 100 aa7.37□□□□□ -1.23
NUP84YDL116W CBR1P38626 284 aaKnown RBP7.37□□□□□ -1.23
NUP84YDL116W GSC2P40989 1895 aa7.37□□□□□ -1.23
NUP84YDL116W SEC27P41811 889 aaKnown RBP7.37□□□□□ -1.23
NUP84YDL116W RNY1Q02933 434 aaKnown RBP7.37□□□□□ -1.23
NUP84YDL116W MED1Q12321 566 aa7.37□□□□□ -1.23
NUP84YDL116W DAL2P25335 343 aa7.37□□□□□ -1.23
NUP84YDL116W BLI1P35727 113 aa7.37□□□□□ -1.23
NUP84YDL116W YHR219WP38900 624 aa7.37□□□□□ -1.23
NUP84YDL116W YIL001WP40560 513 aa7.37□□□□□ -1.23
NUP84YDL116W YJL107CP42947 387 aa7.37□□□□□ -1.23
NUP84YDL116W FMS1P50264 508 aa7.37□□□□□ -1.23
NUP84YDL116W MCM6P53091 1017 aaKnown RBP7.37□□□□□ -1.23
NUP84YDL116W NOG2P53742 486 aaKnown RBP7.37□□□□□ -1.23
NUP84YDL116W YOR059CQ08448 450 aaKnown RBP7.37□□□□□ -1.23
NUP84YDL116W OCA6Q12454 224 aa7.37□□□□□ -1.23
NUP84YDL116W YEL077CQ3E7X8 1277 aa7.37□□□□□ -1.23
NUP84YDL116W TUS1Q06412 1307 aa7.37□□□□□ -1.23
NUP84YDL116W SWI6P09959 803 aa7.36□□□□□ -1.23
NUP84YDL116W YSC84P32793 468 aa7.36□□□□□ -1.23
NUP84YDL116W HSM3P38348 480 aa7.36□□□□□ -1.23
NUP84YDL116W DRN1P53255 507 aaKnown RBP7.36□□□□□ -1.23
NUP84YDL116W TEP1P53916 434 aa7.36□□□□□ -1.23
NUP84YDL116W SFB2P53953 876 aa7.36□□□□□ -1.23
NUP84YDL116W ORC4P54791 529 aa7.36□□□□□ -1.23
NUP84YDL116W TIM8P57744 87 aa7.36□□□□□ -1.23
NUP84YDL116W STB3Q12427 513 aa7.36□□□□□ -1.23
NUP84YDL116W TRM11Q12463 433 aa7.36□□□□□ -1.23
NUP84YDL116W SNT1P25357 1226 aa7.36□□□□□ -1.23
NUP84YDL116W AAD3P25612 363 aa7.36□□□□□ -1.23
NUP84YDL116W RPC19P28000 142 aaKnown RBP7.36□□□□□ -1.23
NUP84YDL116W ZUO1P32527 433 aaKnown RBP7.36□□□□□ -1.23
NUP84YDL116W YKU70P32807 602 aa7.36□□□□□ -1.23
NUP84YDL116W PEP12P32854 288 aa7.36□□□□□ -1.23
NUP84YDL116W CBF5P33322 483 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
NUP84YDL116W CCL1P37366 393 aa7.36□□□□□ -1.23
NUP84YDL116W DSE1P40077 573 aa7.36□□□□□ -1.23
NUP84YDL116W PFK26P40433 827 aaKnown RBP7.36□□□□□ -1.23
NUP84YDL116W USE1P53146 245 aa7.36□□□□□ -1.23
NUP84YDL116W RTS3P53289 263 aa7.36□□□□□ -1.23
NUP84YDL116W TSR1Q07381 788 aaKnown RBP7.36□□□□□ -1.23
NUP84YDL116W DBP10Q12389 995 aaKnown RBP7.36□□□□□ -1.23
NUP84YDL116W WHI5Q12416 295 aa7.36□□□□□ -1.23
NUP84YDL116W ARP6Q12509 438 aa7.36□□□□□ -1.23
NUP84YDL116W PHR1P05066 565 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
NUP84YDL116W CDC33P07260 213 aaKnown RBP7.35□□□□□ -1.23
NUP84YDL116W ILV2P07342 687 aaKnown RBP7.35□□□□□ -1.23
NUP84YDL116W MRPS28P21771 286 aa7.35□□□□□ -1.23
NUP84YDL116W TPS2P31688 896 aaKnown RBP7.35□□□□□ -1.23
NUP84YDL116W DBF4P32325 704 aa7.35□□□□□ -1.23
NUP84YDL116W TFC4P33339 1025 aa7.35□□□□□ -1.23
NUP84YDL116W MAP2P38174 421 aaKnown RBP7.35□□□□□ -1.23
NUP84YDL116W YBL028CP38202 106 aa7.35□□□□□ -1.23
NUP84YDL116W RFC3P38629 340 aa7.35□□□□□ -1.23
NUP84YDL116W PAN5P38787 379 aa7.35□□□□□ -1.23
NUP84YDL116W TDA11P38854 504 aa7.35□□□□□ -1.23
NUP84YDL116W DAN4P47179 1161 aa7.35□□□□□ -1.23
NUP84YDL116W VPS4P52917 437 aa7.35□□□□□ -1.23
NUP84YDL116W YNL011CP53980 444 aa7.35□□□□□ -1.23
NUP84YDL116W UFO1Q04511 668 aa7.35□□□□□ -1.23
NUP84YDL116W CDC53Q12018 815 aaKnown RBP7.35□□□□□ -1.23
NUP84YDL116W RAD10P06838 210 aa7.35□□□□□ -1.23
NUP84YDL116W VMA1P17255 1071 aaKnown RBP7.35□□□□□ -1.23
NUP84YDL116W SOL3P38858 249 aa7.35□□□□□ -1.23
NUP84YDL116W YDR089WP38966 869 aa7.35□□□□□ -1.23
NUP84YDL116W RPN3P40016 523 aaKnown RBP7.35□□□□□ -1.23
NUP84YDL116W ASG1P40467 964 aa7.35□□□□□ -1.23
NUP84YDL116W HXT8P40886 569 aa7.35□□□□□ -1.23
NUP84YDL116W MDR1P53258 950 aa7.35□□□□□ -1.23
NUP84YDL116W UBP2Q01476 1272 aa7.35□□□□□ -1.23
NUP84YDL116W OSH6Q02201 448 aa7.35□□□□□ -1.23
NUP84YDL116W DIA2Q08496 732 aaPredicted RBP7.35□□□□□ -1.23
NUP84YDL116W GCR1P07261 785 aa7.34□□□□□ -1.23
NUP84YDL116W VPS34P22543 875 aa7.34□□□□□ -1.23
NUP84YDL116W NPP1P25353 742 aa7.34□□□□□ -1.23
NUP84YDL116W SPS22P25380 463 aa7.34□□□□□ -1.23
NUP84YDL116W PWP2P25635 923 aaKnown RBP7.34□□□□□ -1.23
NUP84YDL116W YME1P32795 747 aa7.34□□□□□ -1.23
NUP84YDL116W SEC66P33754 206 aa7.34□□□□□ -1.23
NUP84YDL116W YBL055CP34220 418 aaPredicted RBP7.34□□□□□ -1.23
NUP84YDL116W DEF1P35732 738 aaKnown RBP7.34□□□□□ -1.23
NUP84YDL116W UBP11P36026 717 aa7.34□□□□□ -1.23
NUP84YDL116W AVT1P47082 602 aa7.34□□□□□ -1.23
NUP84YDL116W HOP2P53187 214 aa7.34□□□□□ -1.23
NUP84YDL116W TPO2P53283 614 aa7.34□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms