RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C RNR4P49723 345 aaKnown RBP6.31□□□□□ -1.4
PAT1YCR077C PEX21P50091 288 aa6.31□□□□□ -1.4
PAT1YCR077C EEB1Q02891 456 aa6.31□□□□□ -1.4
PAT1YCR077C MYO5Q04439 1219 aaKnown RBP6.31□□□□□ -1.4
PAT1YCR077C YPQ2Q06328 317 aa6.31□□□□□ -1.4
PAT1YCR077C FRA1Q07825 749 aa6.31□□□□□ -1.4
PAT1YCR077C YOL036WQ08206 761 aa6.31□□□□□ -1.4
PAT1YCR077C RKM1Q08961 583 aaPredicted RBP6.31□□□□□ -1.4
PAT1YCR077C ZRT2Q12436 422 aa6.31□□□□□ -1.4
PAT1YCR077C CYB2P00175 591 aa6.3□□□□□ -1.4
PAT1YCR077C SSB1P11484 613 aaKnown RBP6.3□□□□□ -1.4
PAT1YCR077C VMA1P17255 1071 aaKnown RBP6.3□□□□□ -1.4
PAT1YCR077C SRV2P17555 526 aaKnown RBP6.3□□□□□ -1.4
PAT1YCR077C PRP40P33203 583 aaKnown RBP6.3□□□□□ -1.4
PAT1YCR077C YKL222CP35995 705 aa6.3□□□□□ -1.4
PAT1YCR077C MCD4P36051 919 aa6.3□□□□□ -1.4
PAT1YCR077C YBR242WP38331 238 aa6.3□□□□□ -1.4
PAT1YCR077C RCK2P38623 610 aa6.3□□□□□ -1.4
PAT1YCR077C RTT105P40063 208 aa6.3□□□□□ -1.4
PAT1YCR077C SSB2P40150 613 aaKnown RBP6.3□□□□□ -1.4
PAT1YCR077C SNX4P47057 423 aa6.3□□□□□ -1.4
PAT1YCR077C RPC17P47076 161 aa6.3□□□□□ -1.4
PAT1YCR077C SSN8P47821 323 aa6.3□□□□□ -1.4
PAT1YCR077C YNL040WP53960 456 aaPredicted RBP6.3□□□□□ -1.4
PAT1YCR077C GIS4Q04233 774 aa6.3□□□□□ -1.4
PAT1YCR077C MIP1P15801 1254 aa6.3□□□□□ -1.4
PAT1YCR077C RPC53P25441 422 aa6.3□□□□□ -1.4
PAT1YCR077C YME1P32795 747 aa6.3□□□□□ -1.4
PAT1YCR077C MRP8P35719 219 aa6.3□□□□□ -1.4
PAT1YCR077C KES1P35844 434 aaKnown RBP6.3□□□□□ -1.4
PAT1YCR077C KAP123P40069 1113 aaKnown RBP6.3□□□□□ -1.4
PAT1YCR077C GVP36P40531 326 aaKnown RBP6.3□□□□□ -1.4
PAT1YCR077C MMM1P41800 426 aa6.3□□□□□ -1.4
PAT1YCR077C YFL034WP43564 1073 aa6.3□□□□□ -1.4
PAT1YCR077C RPA14P50106 137 aa6.3□□□□□ -1.4
PAT1YCR077C UTP22P53254 1237 aaPredicted RBP6.3□□□□□ -1.4
PAT1YCR077C ULP1Q02724 621 aa6.3□□□□□ -1.4
PAT1YCR077C PNP1Q05788 311 aa6.3□□□□□ -1.4
PAT1YCR077C RTT10Q08924 1013 aa6.3□□□□□ -1.4
PAT1YCR077C YPL216WQ08964 1102 aa6.3□□□□□ -1.4
PAT1YCR077C GPR1Q12361 961 aa6.3□□□□□ -1.4
PAT1YCR077C NOT5Q12514 560 aaPredicted RBP6.3□□□□□ -1.4
PAT1YCR077C OM45P16547 393 aa6.29□□□□□ -1.4
PAT1YCR077C TYR1P20049 452 aa6.29□□□□□ -1.4
PAT1YCR077C BOI1P38041 980 aaKnown RBP6.29□□□□□ -1.4
PAT1YCR077C CDC27P38042 758 aa6.29□□□□□ -1.4
PAT1YCR077C YHL050CP38721 697 aa6.29□□□□□ -1.4
PAT1YCR077C YER156CP40093 338 aaKnown RBP6.29□□□□□ -1.4
PAT1YCR077C VID27P40157 782 aa6.29□□□□□ -1.4
PAT1YCR077C DAS1P47005 663 aa6.29□□□□□ -1.4
PAT1YCR077C YNL144CP53907 740 aa6.29□□□□□ -1.4
PAT1YCR077C SRP1Q02821 542 aaKnown RBP6.29□□□□□ -1.4
PAT1YCR077C MUB1Q03162 620 aa6.29□□□□□ -1.4
PAT1YCR077C DML1Q03652 475 aa6.29□□□□□ -1.4
PAT1YCR077C DCS1Q06151 350 aa6.29□□□□□ -1.4
PAT1YCR077C NYV1Q12255 253 aa6.29□□□□□ -1.4
PAT1YCR077C ERP4Q12450 207 aa6.29□□□□□ -1.4
PAT1YCR077C LSO2Q3E772 92 aaKnown RBP6.29□□□□□ -1.4
PAT1YCR077C SEY1Q99287 776 aa6.29□□□□□ -1.4
PAT1YCR077C MYO1P08964 1928 aa6.29□□□□□ -1.4
PAT1YCR077C TAL1P15019 335 aaKnown RBP6.29□□□□□ -1.4
PAT1YCR077C SMY1P32364 656 aaKnown RBP6.29□□□□□ -1.4
PAT1YCR077C AMN1P38285 549 aaPredicted RBP6.29□□□□□ -1.4
PAT1YCR077C TIF4631P39935 952 aaKnown RBP6.29□□□□□ -1.4
PAT1YCR077C ESL1P40456 1118 aa6.29□□□□□ -1.4
PAT1YCR077C NMD5P46970 1048 aa6.29□□□□□ -1.4
PAT1YCR077C IMD4P50094 524 aaKnown RBP6.29□□□□□ -1.4
PAT1YCR077C TOF1P53840 1238 aa6.29□□□□□ -1.4
PAT1YCR077C ECM11Q04110 302 aa6.29□□□□□ -1.4
PAT1YCR077C INM2Q05533 292 aa6.29□□□□□ -1.4
PAT1YCR077C TOS4Q06266 489 aa6.29□□□□□ -1.4
PAT1YCR077C TAF3Q12297 353 aa6.29□□□□□ -1.4
PAT1YCR077C DSF1P0CX08 502 aa6.28□□□□□ -1.4
PAT1YCR077C YNR073CP0CX09 502 aa6.28□□□□□ -1.4
PAT1YCR077C STI1P15705 589 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
PAT1YCR077C CLB3P24870 427 aa6.28□□□□□ -1.4
PAT1YCR077C TPS2P31688 896 aaKnown RBP6.28□□□□□ -1.4
PAT1YCR077C PEP7P32609 515 aa6.28□□□□□ -1.4
PAT1YCR077C RPC34P32910 317 aa6.28□□□□□ -1.4
PAT1YCR077C TFC4P33339 1025 aa6.28□□□□□ -1.4
PAT1YCR077C SEG2P34250 1132 aa6.28□□□□□ -1.4
PAT1YCR077C PET10P36139 283 aa6.28□□□□□ -1.4
PAT1YCR077C ERP2P39704 215 aa6.28□□□□□ -1.4
PAT1YCR077C UBP5P39944 805 aa6.28□□□□□ -1.4
PAT1YCR077C UBP6P43593 499 aaKnown RBP6.28□□□□□ -1.4
PAT1YCR077C UBP15P50101 1230 aa6.28□□□□□ -1.4
PAT1YCR077C YGR021WP53212 290 aa6.28□□□□□ -1.4
PAT1YCR077C RAT1Q02792 1006 aaKnown RBP6.28□□□□□ -1.4
PAT1YCR077C SHE9Q04172 456 aa6.28□□□□□ -1.4
PAT1YCR077C RRN11Q04712 507 aa6.28□□□□□ -1.4
PAT1YCR077C UBX5Q06682 500 aa6.28□□□□□ -1.4
PAT1YCR077C THI3Q07471 609 aa6.28□□□□□ -1.4
PAT1YCR077C YDL121CQ07541 149 aa6.28□□□□□ -1.4
PAT1YCR077C YOR352WQ08816 343 aa6.28□□□□□ -1.4
PAT1YCR077C GRE2Q12068 342 aaKnown RBP6.28□□□□□ -1.4
PAT1YCR077C SPO21Q12411 609 aa6.28□□□□□ -1.4
PAT1YCR077C VMA4P22203 233 aaKnown RBP6.28□□□□□ -1.4
PAT1YCR077C MIA40P36046 403 aa6.28□□□□□ -1.4
PAT1YCR077C JNM1P36224 373 aa6.28□□□□□ -1.4
PAT1YCR077C MRPL40P36534 297 aa6.28□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms