RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeastyeast

Gene LDS1, Length 978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDS1YAL018C AFG3P39925 761 aa6.57□□□□□ -1.36
LDS1YAL018C VFA1P40080 203 aa6.57□□□□□ -1.36
LDS1YAL018C YFL040WP43562 540 aa6.57□□□□□ -1.36
LDS1YAL018C AZR1P50080 613 aa6.57□□□□□ -1.36
LDS1YAL018C CTR9P89105 1077 aa6.57□□□□□ -1.36
LDS1YAL018C UTP14Q04500 899 aaKnown RBP6.57□□□□□ -1.36
LDS1YAL018C YLR297WQ05899 129 aa6.57□□□□□ -1.36
LDS1YAL018C YPR078CQ06813 372 aa6.57□□□□□ -1.36
LDS1YAL018C TY1A-BLQ12266 440 aa6.57□□□□□ -1.36
LDS1YAL018C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
LDS1YAL018C RPC25P35718 212 aa6.56□□□□□ -1.36
LDS1YAL018C SHM1P37292 490 aaPredicted RBP6.56□□□□□ -1.36
LDS1YAL018C FTR1P40088 404 aa6.56□□□□□ -1.36
LDS1YAL018C HSH155P49955 971 aaKnown RBP6.56□□□□□ -1.36
LDS1YAL018C ALF1P53904 254 aa6.56□□□□□ -1.36
LDS1YAL018C RPA49Q01080 415 aaPredicted RBP6.56□□□□□ -1.36
LDS1YAL018C YLR346CQ06139 101 aa6.56□□□□□ -1.36
LDS1YAL018C ESC2Q06340 456 aa6.56□□□□□ -1.36
LDS1YAL018C OPY2Q06810 360 aa6.56□□□□□ -1.36
LDS1YAL018C NEW1Q08972 1196 aaKnown RBP6.56□□□□□ -1.36
LDS1YAL018C HMI1Q12039 706 aa6.56□□□□□ -1.36
LDS1YAL018C CWC2Q12046 339 aaPredicted RBP6.56□□□□□ -1.36
LDS1YAL018C SGT2Q12118 346 aaKnown RBP6.56□□□□□ -1.36
LDS1YAL018C RRP6Q12149 733 aaKnown RBP6.56□□□□□ -1.36
LDS1YAL018C FUB1P25659 250 aa6.55□□□□□ -1.36
LDS1YAL018C SWI3P32591 825 aa6.55□□□□□ -1.36
LDS1YAL018C NIP100P33420 868 aa6.55□□□□□ -1.36
LDS1YAL018C MKS1P34072 584 aa6.55□□□□□ -1.36
LDS1YAL018C PIN4P34217 668 aaKnown RBP RIP-Chip data6.55□□□□□ -1.36not detected
LDS1YAL018C VID24P38263 362 aa6.55□□□□□ -1.36
LDS1YAL018C YAP1801P38856 637 aa6.55□□□□□ -1.36
LDS1YAL018C YIR007WP40566 764 aa6.55□□□□□ -1.36
LDS1YAL018C ASN1P49089 572 aaKnown RBP6.55□□□□□ -1.36
LDS1YAL018C ORC5P50874 479 aa6.55□□□□□ -1.36
LDS1YAL018C HFM1P51979 1187 aa6.55□□□□□ -1.36
LDS1YAL018C MNP1P53163 194 aaPredicted RBP6.55□□□□□ -1.36
LDS1YAL018C ENV11P53246 860 aa6.55□□□□□ -1.36
LDS1YAL018C YGR130CP53278 816 aa6.55□□□□□ -1.36
LDS1YAL018C YNL134CP53912 376 aaKnown RBP6.55□□□□□ -1.36
LDS1YAL018C ESBP6P53918 673 aa6.55□□□□□ -1.36
LDS1YAL018C VPS72Q03388 795 aa6.55□□□□□ -1.36
LDS1YAL018C TRS130Q03660 1102 aa6.55□□□□□ -1.36
LDS1YAL018C UTP5Q04177 643 aaKnown RBP6.55□□□□□ -1.36
LDS1YAL018C VPS38Q05919 439 aa6.55□□□□□ -1.36
LDS1YAL018C ECM30Q06673 1274 aa6.55□□□□□ -1.36
LDS1YAL018C CSR1Q06705 408 aaKnown RBP6.55□□□□□ -1.36
LDS1YAL018C TSR1Q07381 788 aaKnown RBP6.55□□□□□ -1.36
LDS1YAL018C ATG9Q12142 997 aa6.55□□□□□ -1.36
LDS1YAL018C SPT5P27692 1063 aaKnown RBP6.54□□□□□ -1.36
LDS1YAL018C KIP1P28742 1111 aa6.54□□□□□ -1.36
LDS1YAL018C HXT8P40886 569 aa6.54□□□□□ -1.36
LDS1YAL018C YJR098CP47139 656 aa6.54□□□□□ -1.36
LDS1YAL018C ALT2P52892 507 aa6.54□□□□□ -1.36
LDS1YAL018C YPL034WQ03083 165 aa6.54□□□□□ -1.36
LDS1YAL018C DFG5Q05031 458 aa6.54□□□□□ -1.36
LDS1YAL018C GIS3Q12418 502 aa6.54□□□□□ -1.36
LDS1YAL018C PCD1Q12524 340 aa6.54□□□□□ -1.36
LDS1YAL018C SNF1P06782 633 aaKnown RBP6.53□□□□□ -1.36
LDS1YAL018C SMC1P32908 1225 aa6.53□□□□□ -1.36
LDS1YAL018C XRS2P33301 854 aa6.53□□□□□ -1.36
LDS1YAL018C TRM2P33753 639 aa6.53□□□□□ -1.36
LDS1YAL018C RTT107P38850 1070 aa6.53□□□□□ -1.36
LDS1YAL018C STU2P46675 888 aa6.53□□□□□ -1.36
LDS1YAL018C DAS1P47005 663 aa6.53□□□□□ -1.36
LDS1YAL018C SCW11P53189 542 aa6.53□□□□□ -1.36
LDS1YAL018C ERG5P54781 538 aa6.53□□□□□ -1.36
LDS1YAL018C MUK1Q02866 612 aa6.53□□□□□ -1.36
LDS1YAL018C UME1Q03010 460 aa6.53□□□□□ -1.36
LDS1YAL018C DOT1Q04089 582 aaKnown RBP6.53□□□□□ -1.36
LDS1YAL018C IWR1Q07532 353 aaPredicted RBP6.53□□□□□ -1.36
LDS1YAL018C PPR1P07272 904 aaPredicted RBP6.52□□□□□ -1.37
LDS1YAL018C TIF1P10081 395 aaKnown RBP6.52□□□□□ -1.37
LDS1YAL018C ADE2P21264 571 aaKnown RBP6.52□□□□□ -1.37
LDS1YAL018C PDC6P26263 563 aaKnown RBP6.52□□□□□ -1.37
LDS1YAL018C RPT1P33299 467 aaKnown RBP6.52□□□□□ -1.37
LDS1YAL018C WHI3P34761 661 aaKnown RBP6.52□□□□□ -1.37
LDS1YAL018C CAJ1P39101 391 aa6.52□□□□□ -1.37
LDS1YAL018C LAM5P43560 674 aa6.52□□□□□ -1.37
LDS1YAL018C SPO74P45819 413 aa6.52□□□□□ -1.37
LDS1YAL018C SGM1P47166 707 aa6.52□□□□□ -1.37
LDS1YAL018C TPO2P53283 614 aa6.52□□□□□ -1.37
LDS1YAL018C STE20Q03497 939 aaKnown RBP6.52□□□□□ -1.37
LDS1YAL018C SHS1Q07657 551 aa6.52□□□□□ -1.37
LDS1YAL018C CDC33P07260 213 aaKnown RBP6.51□□□□□ -1.37
LDS1YAL018C ASP3-2P0CX77 362 aa6.51□□□□□ -1.37
LDS1YAL018C ASP3-3P0CX78 362 aa6.51□□□□□ -1.37
LDS1YAL018C ASP3-4P0CX79 362 aa6.51□□□□□ -1.37
LDS1YAL018C ASP3-1P0CZ17 362 aa6.51□□□□□ -1.37
LDS1YAL018C SPO12P17123 173 aa6.51□□□□□ -1.37
LDS1YAL018C GLN3P18494 730 aa6.51□□□□□ -1.37
LDS1YAL018C COX11P19516 300 aaKnown RBP6.51□□□□□ -1.37
LDS1YAL018C SEC21P32074 935 aaKnown RBP6.51□□□□□ -1.37
LDS1YAL018C POA1P38218 177 aa6.51□□□□□ -1.37
LDS1YAL018C SHQ1P40486 507 aaPredicted RBP6.51□□□□□ -1.37
LDS1YAL018C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
LDS1YAL018C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
LDS1YAL018C CWC21Q03375 135 aaKnown RBP6.51□□□□□ -1.37
LDS1YAL018C SDH5Q08230 162 aa6.51□□□□□ -1.37
LDS1YAL018C APL4Q12028 832 aa6.51□□□□□ -1.37
LDS1YAL018C DAS2Q12084 232 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms