RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 ATG1P53104 897 aa10.85□□□□□ -0.67
RDN18-1RDN18-1 MPC54Q08550 464 aa10.85□□□□□ -0.67
RDN18-1RDN18-1 OSW2Q12202 724 aa10.85□□□□□ -0.67
RDN18-1RDN18-1 DYS1P38791 387 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 ZAP1P47043 880 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 SCS3P53012 380 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 DRN1P53255 507 aaKnown RBP10.84□□□□□ -0.67
RDN18-1RDN18-1 UFO1Q04511 668 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 FRA1Q07825 749 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 LAA1P39526 2014 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 BI2P03873 423 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 BI4P03879 638 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 PKC1P24583 1151 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 KIN82P25341 720 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 RRT12P25381 491 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 GYP6P32806 458 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 CUL3P53202 744 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 CPR6P53691 371 aaKnown RBP10.84□□□□□ -0.67
RDN18-1RDN18-1 PUF3Q07807 879 aaKnown RBP RIP-Chip data10.84□□□□□ -0.67not detected
RDN18-1RDN18-1 HIF1Q12373 385 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 ECM3Q99252 613 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 BI3Q9ZZW7 517 aa10.84□□□□□ -0.67
RDN18-1RDN18-1 RPS3P05750 240 aaKnown RBP10.83□□□□□ -0.68
RDN18-1RDN18-1 ADH4P10127 382 aa10.83□□□□□ -0.68
RDN18-1RDN18-1 PEP5P12868 1029 aa10.83□□□□□ -0.68
RDN18-1RDN18-1 PRE10P21242 288 aaKnown RBP RIP-Chip data10.83□□□□□ -0.68not detected
RDN18-1RDN18-1 ILV6P25605 309 aaKnown RBP10.83□□□□□ -0.68
RDN18-1RDN18-1 YUR1P26725 428 aa10.83□□□□□ -0.68
RDN18-1RDN18-1 VHC1P38329 1120 aa10.83□□□□□ -0.68
RDN18-1RDN18-1 ECM1P39715 212 aa10.83□□□□□ -0.68
RDN18-1RDN18-1 SBE2P42223 864 aaKnown RBP10.83□□□□□ -0.68
RDN18-1RDN18-1 RRT6P53117 311 aaPredicted RBP10.83□□□□□ -0.68
RDN18-1RDN18-1 TPO2P53283 614 aa10.83□□□□□ -0.68
RDN18-1RDN18-1 TRS130Q03660 1102 aa10.83□□□□□ -0.68
RDN18-1RDN18-1 YPL225WQ08971 146 aaKnown RBP10.83□□□□□ -0.68
RDN18-1RDN18-1 GIS3Q12418 502 aa10.83□□□□□ -0.68
RDN18-1RDN18-1 SEY1Q99287 776 aa10.83□□□□□ -0.68
RDN18-1RDN18-1 RAD10P06838 210 aa10.82□□□□□ -0.68
RDN18-1RDN18-1 CBF1P17106 351 aa10.82□□□□□ -0.68
RDN18-1RDN18-1 EFT1P32324 842 aaKnown RBP10.82□□□□□ -0.68
RDN18-1RDN18-1 PEX2P32800 271 aa10.82□□□□□ -0.68
RDN18-1RDN18-1 VID24P38263 362 aa10.82□□□□□ -0.68
RDN18-1RDN18-1 FTR1P40088 404 aa10.82□□□□□ -0.68
RDN18-1RDN18-1 INA22P40576 216 aa10.82□□□□□ -0.68
RDN18-1RDN18-1 PUS2P53167 370 aa10.82□□□□□ -0.68
RDN18-1RDN18-1 STE20Q03497 939 aaKnown RBP10.82□□□□□ -0.68
RDN18-1RDN18-1 ABP140Q08641 628 aaKnown RBP10.82□□□□□ -0.68
RDN18-1RDN18-1 VMA4P22203 233 aaKnown RBP10.81□□□□□ -0.68
RDN18-1RDN18-1 YME1P32795 747 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 MED8P38304 223 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 SAD1P43589 448 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 NOG2P53742 486 aaKnown RBP10.81□□□□□ -0.68
RDN18-1RDN18-1 TAF9Q05027 157 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 ECM29P38737 1868 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 ADE3P07245 946 aaKnown RBP10.81□□□□□ -0.68
RDN18-1RDN18-1 POL3P15436 1097 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 SFL1P20134 766 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 YCR051WP25631 222 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 TMT1P32643 299 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 PTC3P34221 468 aaKnown RBP10.81□□□□□ -0.68
RDN18-1RDN18-1 YIL089WP40500 205 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 ACF4P47129 309 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 SHE10P53075 577 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 YAF9P53930 226 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 SHS1Q07657 551 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 YLL058WQ12198 575 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 ZPS1Q12512 249 aa10.81□□□□□ -0.68
RDN18-1RDN18-1 MOT1P32333 1867 aa10.8□□□□□ -0.68
RDN18-1RDN18-1 PCS60P38137 543 aaKnown RBP RIP-Chip data10.8□□□□□ -0.68not detected
RDN18-1RDN18-1 CBR1P38626 284 aaKnown RBP10.8□□□□□ -0.68
RDN18-1RDN18-1 MRX1P40050 688 aa10.8□□□□□ -0.68
RDN18-1RDN18-1 YMR134WP40207 237 aa10.8□□□□□ -0.68
RDN18-1RDN18-1 SCD6P45978 349 aaKnown RBP RIP-Chip data10.8□□□□□ -0.68not detected
RDN18-1RDN18-1 MNP1P53163 194 aaPredicted RBP10.8□□□□□ -0.68
RDN18-1RDN18-1 MDR1P53258 950 aa10.8□□□□□ -0.68
RDN18-1RDN18-1 YNL035CP53962 389 aaKnown RBP10.8□□□□□ -0.68
RDN18-1RDN18-1 YOR059CQ08448 450 aaKnown RBP10.8□□□□□ -0.68
RDN18-1RDN18-1 RPL4AP10664 362 aaKnown RBP10.79□□□□□ -0.68
RDN18-1RDN18-1 NAT1P12945 854 aaKnown RBP10.79□□□□□ -0.68
RDN18-1RDN18-1 PRP16P15938 1071 aaPredicted RBP10.79□□□□□ -0.68
RDN18-1RDN18-1 EST1P17214 699 aaPredicted RBP10.79□□□□□ -0.68
RDN18-1RDN18-1 COX11P19516 300 aaKnown RBP10.79□□□□□ -0.68
RDN18-1RDN18-1 MKT1P40850 830 aaKnown RBP10.79□□□□□ -0.68
RDN18-1RDN18-1 RPL4BP49626 362 aaKnown RBP10.79□□□□□ -0.68
RDN18-1RDN18-1 RPL22BP56628 122 aaKnown RBP10.79□□□□□ -0.68
RDN18-1RDN18-1 TRM11Q12463 433 aa10.79□□□□□ -0.68
RDN18-1RDN18-1 GCR1P07261 785 aa10.79□□□□□ -0.68
RDN18-1RDN18-1 SSA1P10591 642 aaKnown RBP10.79□□□□□ -0.68
RDN18-1RDN18-1 SPO16P17122 198 aa10.79□□□□□ -0.68
RDN18-1RDN18-1 DPH2P32461 534 aa10.79□□□□□ -0.68
RDN18-1RDN18-1 SSP1P38871 571 aa10.79□□□□□ -0.68
RDN18-1RDN18-1 TMN3P40071 706 aa10.79□□□□□ -0.68
RDN18-1RDN18-1 RSM26P47141 266 aa10.79□□□□□ -0.68
RDN18-1RDN18-1 PSP2P50109 593 aaKnown RBP10.79□□□□□ -0.68
RDN18-1RDN18-1 ECM7Q06200 448 aa10.79□□□□□ -0.68
RDN18-1RDN18-1 MSC6Q08818 692 aaKnown RBP10.79□□□□□ -0.68
RDN18-1RDN18-1 YML002WP0CF17 737 aa10.78□□□□□ -0.68
RDN18-1RDN18-1 AEP2P22136 580 aa10.78□□□□□ -0.68
RDN18-1RDN18-1 SEG2P34250 1132 aa10.78□□□□□ -0.68
RDN18-1RDN18-1 YSW1P38280 609 aa10.78□□□□□ -0.68
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms