RNA–Protein interactions for RNA: YPL127C

HHO1, Transcript of Histone H1, linker histone with roles in meiosis and sporulation, yeast

Gene HHO1, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHO1	YPL127C	ATG23	Q06671	453 aa		11.28	□□□□□ -0.6
HHO1	YPL127C	MET7	Q08645	548 aa		11.28	□□□□□ -0.6
HHO1	YPL127C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	11.27	□□□□□ -0.61	not detected
HHO1	YPL127C	SWI3	P32591	825 aa		11.27	□□□□□ -0.61
HHO1	YPL127C	GUA1	P38625	525 aa	Known RBP	11.27	□□□□□ -0.61
HHO1	YPL127C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	11.27	□□□□□ -0.61	not detected
HHO1	YPL127C	ASN1	P49089	572 aa	Known RBP	11.27	□□□□□ -0.61
HHO1	YPL127C	ORC5	P50874	479 aa		11.27	□□□□□ -0.61
HHO1	YPL127C	CWC22	P53333	577 aa	Known RBP	11.27	□□□□□ -0.61
HHO1	YPL127C	JJJ1	P53863	590 aa		11.27	□□□□□ -0.61
HHO1	YPL127C	YDR090C	Q03193	310 aa		11.27	□□□□□ -0.61
HHO1	YPL127C	VTI1	Q04338	217 aa		11.27	□□□□□ -0.61
HHO1	YPL127C	IWR1	Q07532	353 aa	Predicted RBP	11.27	□□□□□ -0.61
HHO1	YPL127C	NUR1	Q12066	484 aa		11.27	□□□□□ -0.61
HHO1	YPL127C	GIS3	Q12418	502 aa		11.27	□□□□□ -0.61
HHO1	YPL127C	RMP1	Q12530	201 aa		11.27	□□□□□ -0.61
HHO1	YPL127C	POX1	P13711	748 aa		11.26	□□□□□ -0.61
HHO1	YPL127C	GFA1	P14742	717 aa	Known RBP	11.26	□□□□□ -0.61
HHO1	YPL127C	NFU1	P32860	256 aa		11.26	□□□□□ -0.61
HHO1	YPL127C	RIM101	P33400	625 aa		11.26	□□□□□ -0.61
HHO1	YPL127C	YKL050C	P35736	922 aa		11.26	□□□□□ -0.61
HHO1	YPL127C	BCH2	P36122	765 aa		11.26	□□□□□ -0.61
HHO1	YPL127C	EXO5	P38289	585 aa		11.26	□□□□□ -0.61
HHO1	YPL127C	TDA3	P38758	523 aa		11.26	□□□□□ -0.61
HHO1	YPL127C	SCS3	P53012	380 aa		11.26	□□□□□ -0.61
HHO1	YPL127C	YLR225C	Q05948	407 aa	Known RBP	11.26	□□□□□ -0.61
HHO1	YPL127C	RGA2	Q06407	1009 aa		11.26	□□□□□ -0.61
HHO1	YPL127C	NOP6	Q07623	225 aa	Known RBP	11.26	□□□□□ -0.61
HHO1	YPL127C	YDR461C-A	Q2V2P7	80 aa		11.26	□□□□□ -0.61
HHO1	YPL127C	GCG1	P32656	232 aa	Known RBP	11.25	□□□□□ -0.61
HHO1	YPL127C	CSG2	P35206	410 aa		11.25	□□□□□ -0.61
HHO1	YPL127C	SPC72	P39723	622 aa		11.25	□□□□□ -0.61
HHO1	YPL127C	DAS1	P47005	663 aa		11.25	□□□□□ -0.61
HHO1	YPL127C	CPR7	P47103	393 aa		11.25	□□□□□ -0.61
HHO1	YPL127C	ACF4	P47129	309 aa		11.25	□□□□□ -0.61
HHO1	YPL127C	CLA4	P48562	842 aa		11.25	□□□□□ -0.61
HHO1	YPL127C	TBF1	Q02457	562 aa		11.25	□□□□□ -0.61
HHO1	YPL127C	SPT2	P06843	333 aa	Predicted RBP	11.24	□□□□□ -0.61
HHO1	YPL127C	CDC42	P19073	191 aa		11.24	□□□□□ -0.61
HHO1	YPL127C	SCJ1	P25303	377 aa		11.24	□□□□□ -0.61
HHO1	YPL127C	DAL2	P25335	343 aa		11.24	□□□□□ -0.61
HHO1	YPL127C	TMT1	P32643	299 aa		11.24	□□□□□ -0.61
HHO1	YPL127C	SMY2	P32909	740 aa	Known RBP	11.24	□□□□□ -0.61
HHO1	YPL127C	RCK2	P38623	610 aa		11.24	□□□□□ -0.61
HHO1	YPL127C	CIN4	P39110	191 aa		11.24	□□□□□ -0.61
HHO1	YPL127C	YTA12	P40341	825 aa		11.24	□□□□□ -0.61
HHO1	YPL127C	EEB1	Q02891	456 aa		11.24	□□□□□ -0.61
HHO1	YPL127C	STE20	Q03497	939 aa	Known RBP	11.24	□□□□□ -0.61
HHO1	YPL127C	TRS130	Q03660	1102 aa		11.24	□□□□□ -0.61
HHO1	YPL127C	PPM1	Q04081	328 aa		11.24	□□□□□ -0.61
HHO1	YPL127C	TIF6	Q12522	245 aa	Known RBP	11.24	□□□□□ -0.61
HHO1	YPL127C	CDC8	P00572	216 aa		11.23	□□□□□ -0.61
HHO1	YPL127C	RPS3	P05750	240 aa	Known RBP	11.23	□□□□□ -0.61
HHO1	YPL127C	IME1	P21190	360 aa		11.23	□□□□□ -0.61
HHO1	YPL127C	CDC11	P32458	415 aa		11.23	□□□□□ -0.61
HHO1	YPL127C	FLR1	P38124	548 aa		11.23	□□□□□ -0.61
HHO1	YPL127C	MMS4	P38257	691 aa		11.23	□□□□□ -0.61
HHO1	YPL127C	DIG1	Q03063	452 aa	Known RBP	11.23	□□□□□ -0.61
HHO1	YPL127C	ERV41	Q04651	352 aa		11.23	□□□□□ -0.61
HHO1	YPL127C	ECI1	Q05871	280 aa		11.23	□□□□□ -0.61
HHO1	YPL127C	SGT2	Q12118	346 aa	Known RBP	11.23	□□□□□ -0.61
HHO1	YPL127C	ZRT2	Q12436	422 aa		11.23	□□□□□ -0.61
HHO1	YPL127C	MAS2	P11914	482 aa		11.22	□□□□□ -0.61
HHO1	YPL127C	COX11	P19516	300 aa	Known RBP	11.22	□□□□□ -0.61
HHO1	YPL127C	AFT1	P22149	690 aa		11.22	□□□□□ -0.61
HHO1	YPL127C	SKG6	P32900	734 aa	Predicted RBP	11.22	□□□□□ -0.61
HHO1	YPL127C	MUD2	P36084	527 aa	Known RBP	11.22	□□□□□ -0.61
HHO1	YPL127C	MRX3	P38172	270 aa		11.22	□□□□□ -0.61
HHO1	YPL127C	VID24	P38263	362 aa		11.22	□□□□□ -0.61
HHO1	YPL127C	KSP1	P38691	1029 aa	Known RBP	11.22	□□□□□ -0.61
HHO1	YPL127C	RPC17	P47076	161 aa		11.22	□□□□□ -0.61
HHO1	YPL127C	MNP1	P53163	194 aa	Predicted RBP	11.22	□□□□□ -0.61
HHO1	YPL127C	DRN1	P53255	507 aa	Known RBP	11.22	□□□□□ -0.61
HHO1	YPL127C	YKL068W-A	Q3E826	78 aa		11.22	□□□□□ -0.61
HHO1	YPL127C	GPT2	P36148	743 aa		11.21	□□□□□ -0.61
HHO1	YPL127C	OLA1	P38219	394 aa	Known RBP	11.21	□□□□□ -0.61
HHO1	YPL127C	ETP1	P38748	585 aa	Known RBP	11.21	□□□□□ -0.61
HHO1	YPL127C	LCP5	P40079	357 aa	Predicted RBP	11.21	□□□□□ -0.61
HHO1	YPL127C	PHO86	P46956	311 aa		11.21	□□□□□ -0.61
HHO1	YPL127C	MSC2	Q03455	724 aa		11.21	□□□□□ -0.61
HHO1	YPL127C	URH1	Q04179	340 aa		11.21	□□□□□ -0.61
HHO1	YPL127C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	11.21	□□□□□ -0.61	not detected
HHO1	YPL127C	SPO21	Q12411	609 aa		11.21	□□□□□ -0.61
HHO1	YPL127C	AI5_BETA	Q9ZZX0	354 aa		11.21	□□□□□ -0.61
HHO1	YPL127C	YLR462W	O13556	202 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	WHI2	P12611	486 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	SNA3	P14359	133 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	HIS2	P38635	335 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	YHL049C	P38722	271 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	DYS1	P38791	387 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	YEL075C	P39972	122 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	YER189W	P40104	122 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	YFL064C	P43540	174 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	11.2	□□□□□ -0.62	not detected
HHO1	YPL127C	YGR111W	P53265	400 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	CEF1	Q03654	590 aa	Predicted RBP	11.2	□□□□□ -0.62
HHO1	YPL127C	ATG16	Q03818	150 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	APL5	Q08951	932 aa	Known RBP	11.2	□□□□□ -0.62
HHO1	YPL127C	ICL2	Q12031	575 aa		11.2	□□□□□ -0.62
HHO1	YPL127C	YBL111C	Q3E7Y5	667 aa		11.2	□□□□□ -0.62

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms