RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W LIF1P53150 421 aa3.94□□□□□ -1.78
MSD1YPL104W CNM67P53865 581 aaKnown RBP3.94□□□□□ -1.78
MSD1YPL104W SUB1P54000 292 aaKnown RBP3.94□□□□□ -1.78
MSD1YPL104W ORC4P54791 529 aa3.94□□□□□ -1.78
MSD1YPL104W FUS2Q05670 677 aa3.94□□□□□ -1.78
MSD1YPL104W YPQ2Q06328 317 aa3.94□□□□□ -1.78
MSD1YPL104W GUD1Q07729 489 aa3.94□□□□□ -1.78
MSD1YPL104W YPL216WQ08964 1102 aa3.94□□□□□ -1.78
MSD1YPL104W APL4Q12028 832 aa3.94□□□□□ -1.78
MSD1YPL104W MCD1Q12158 566 aa3.94□□□□□ -1.78
MSD1YPL104W FBP1P09201 348 aa3.94□□□□□ -1.78
MSD1YPL104W SAM1P10659 382 aaKnown RBP3.94□□□□□ -1.78
MSD1YPL104W PFK1P16861 987 aaKnown RBP3.94□□□□□ -1.78
MSD1YPL104W SPO11P23179 398 aa3.94□□□□□ -1.78
MSD1YPL104W PGM1P33401 570 aaKnown RBP3.94□□□□□ -1.78
MSD1YPL104W TGL1P34163 548 aa3.94□□□□□ -1.78
MSD1YPL104W YKL069WP36088 180 aa3.94□□□□□ -1.78
MSD1YPL104W YKR018CP36114 725 aa3.94□□□□□ -1.78
MSD1YPL104W PXL1P36166 706 aa3.94□□□□□ -1.78
MSD1YPL104W SHM1P37292 490 aaPredicted RBP3.94□□□□□ -1.78
MSD1YPL104W LDH1P38139 375 aa3.94□□□□□ -1.78
MSD1YPL104W MIP6P38760 659 aaKnown RBP3.94□□□□□ -1.78
MSD1YPL104W PIH1P38768 344 aa3.94□□□□□ -1.78
MSD1YPL104W RTT107P38850 1070 aa3.94□□□□□ -1.78
MSD1YPL104W SPF1P39986 1215 aaKnown RBP3.94□□□□□ -1.78
MSD1YPL104W VAB2P40003 282 aa3.94□□□□□ -1.78
MSD1YPL104W TOS3P43637 560 aa3.94□□□□□ -1.78
MSD1YPL104W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
MSD1YPL104W GUP1P53154 560 aa3.94□□□□□ -1.78
MSD1YPL104W TYW3P53177 273 aa3.94□□□□□ -1.78
MSD1YPL104W SEC5P89102 971 aa3.94□□□□□ -1.78
MSD1YPL104W TMA64Q04600 565 aaKnown RBP3.94□□□□□ -1.78
MSD1YPL104W SPH1Q06160 661 aa3.94□□□□□ -1.78
MSD1YPL104W WHI4Q07655 649 aaKnown RBP3.94□□□□□ -1.78
MSD1YPL104W YOL075CQ08234 1294 aa3.94□□□□□ -1.78
MSD1YPL104W RKM4Q12504 494 aa3.94□□□□□ -1.78
MSD1YPL104W ARP6Q12509 438 aa3.94□□□□□ -1.78
MSD1YPL104W PGK1P00560 416 aaKnown RBP3.93□□□□□ -1.78
MSD1YPL104W SRD1P09007 221 aa3.93□□□□□ -1.78
MSD1YPL104W MCM1P11746 286 aa3.93□□□□□ -1.78
MSD1YPL104W PRP22P24384 1145 aaKnown RBP3.93□□□□□ -1.78
MSD1YPL104W RPC25P35718 212 aa3.93□□□□□ -1.78
MSD1YPL104W HUL4P40985 892 aa3.93□□□□□ -1.78
MSD1YPL104W GPD2P41911 440 aaKnown RBP3.93□□□□□ -1.78
MSD1YPL104W RRT6P53117 311 aaPredicted RBP3.93□□□□□ -1.78
MSD1YPL104W DFG5Q05031 458 aa3.93□□□□□ -1.78
MSD1YPL104W YLR287CQ05881 355 aa3.93□□□□□ -1.78
MSD1YPL104W YCS4Q06156 1176 aa3.93□□□□□ -1.78
MSD1YPL104W HMI1Q12039 706 aa3.93□□□□□ -1.78
MSD1YPL104W Q0182Q9ZZW1 134 aa3.93□□□□□ -1.78
MSD1YPL104W STE6P12866 1290 aa3.93□□□□□ -1.78
MSD1YPL104W CLN3P13365 580 aa3.93□□□□□ -1.78
MSD1YPL104W RPC53P25441 422 aa3.93□□□□□ -1.78
MSD1YPL104W DUT1P33317 147 aa3.93□□□□□ -1.78
MSD1YPL104W EFM2P38347 419 aa3.93□□□□□ -1.78
MSD1YPL104W FIR1P40020 876 aa3.93□□□□□ -1.78
MSD1YPL104W YEN1P40028 759 aa3.93□□□□□ -1.78
MSD1YPL104W VFA1P40080 203 aa3.93□□□□□ -1.78
MSD1YPL104W RGD2P43556 714 aa3.93□□□□□ -1.78
MSD1YPL104W HFM1P51979 1187 aa3.93□□□□□ -1.78
MSD1YPL104W YGR053CP53234 283 aa3.93□□□□□ -1.78
MSD1YPL104W DIP5P53388 608 aa3.93□□□□□ -1.78
MSD1YPL104W PTA1Q01329 785 aaPredicted RBP3.93□□□□□ -1.78
MSD1YPL104W SYH1Q02875 849 aaKnown RBP3.93□□□□□ -1.78
MSD1YPL104W HOS3Q02959 697 aaKnown RBP3.93□□□□□ -1.78
MSD1YPL104W UTP14Q04500 899 aaKnown RBP3.93□□□□□ -1.78
MSD1YPL104W PHM6Q05637 104 aa3.93□□□□□ -1.78
MSD1YPL104W VPS38Q05919 439 aa3.93□□□□□ -1.78
MSD1YPL104W DUS3Q06053 668 aaKnown RBP3.93□□□□□ -1.78
MSD1YPL104W COG4Q06096 861 aa3.93□□□□□ -1.78
MSD1YPL104W YDL057WQ07379 328 aa3.93□□□□□ -1.78
MSD1YPL104W TCO89Q08921 799 aa3.93□□□□□ -1.78
MSD1YPL104W FAL1Q12099 399 aaKnown RBP3.93□□□□□ -1.78
MSD1YPL104W RRP6Q12149 733 aaKnown RBP3.93□□□□□ -1.78
MSD1YPL104W TIF6Q12522 245 aaKnown RBP3.93□□□□□ -1.78
MSD1YPL104W TY1B-AO13527 1196 aaKnown RBP3.92□□□□□ -1.78
MSD1YPL104W CCP1P00431 361 aa3.92□□□□□ -1.78
MSD1YPL104W MSN1P22148 382 aa3.92□□□□□ -1.78
MSD1YPL104W RRP43P25359 394 aaPredicted RBP3.92□□□□□ -1.78
MSD1YPL104W MCM5P29496 775 aaKnown RBP3.92□□□□□ -1.78
MSD1YPL104W THI4P32318 326 aa3.92□□□□□ -1.78
MSD1YPL104W UTR4P32626 227 aa3.92□□□□□ -1.78
MSD1YPL104W SHP1P34223 423 aa3.92□□□□□ -1.78
MSD1YPL104W UBP11P36026 717 aa3.92□□□□□ -1.78
MSD1YPL104W MCD4P36051 919 aa3.92□□□□□ -1.78
MSD1YPL104W MCR1P36060 302 aaKnown RBP3.92□□□□□ -1.78
MSD1YPL104W IRS4P36115 615 aaKnown RBP3.92□□□□□ -1.78
MSD1YPL104W PCH2P38126 564 aa3.92□□□□□ -1.78
MSD1YPL104W PNT1P38969 423 aa3.92□□□□□ -1.78
MSD1YPL104W PSY2P40164 858 aa3.92□□□□□ -1.78
MSD1YPL104W NBP1P52919 319 aaPredicted RBP3.92□□□□□ -1.78
MSD1YPL104W ALF1P53904 254 aa3.92□□□□□ -1.78
MSD1YPL104W ERG5P54781 538 aa3.92□□□□□ -1.78
MSD1YPL104W SPO75Q07798 868 aa3.92□□□□□ -1.78
MSD1YPL104W FLC1Q08967 793 aa3.92□□□□□ -1.78
MSD1YPL104W CWC2Q12046 339 aaPredicted RBP3.92□□□□□ -1.78
MSD1YPL104W YLR125WQ12138 136 aa3.92□□□□□ -1.78
MSD1YPL104W ATG9Q12142 997 aa3.92□□□□□ -1.78
MSD1YPL104W MED1Q12321 566 aa3.92□□□□□ -1.78
MSD1YPL104W RPP2BP02400 110 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 92.8 ms